RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 KRBOX4Q5JUW0 171 aa17.06■□□□□ 0.32
HOXC6-202ENST00000394331 FAHD2BQ6P2I3 314 aaPredicted RBP17.06■□□□□ 0.32
HOXC6-202ENST00000394331 FIGNL1Q6PIW4 674 aa17.06■□□□□ 0.32
HOXC6-202ENST00000394331 ETV3LQ6ZN32 361 aa17.06■□□□□ 0.32
HOXC6-202ENST00000394331 SLC25A42Q86VD7 318 aa17.06■□□□□ 0.32
HOXC6-202ENST00000394331 LCN9Q8WX39 176 aa17.06■□□□□ 0.32
HOXC6-202ENST00000394331 FAHD2AQ96GK7 314 aa17.06■□□□□ 0.32
HOXC6-202ENST00000394331 SERTAD3Q9UJW9 196 aa17.06■□□□□ 0.32
HOXC6-202ENST00000394331 ZNF443Q9Y2A4 671 aaPredicted RBP17.06■□□□□ 0.32
HOXC6-202ENST00000394331 URADA6NGE7 173 aa17.05■□□□□ 0.32
HOXC6-202ENST00000394331 AK1P00568 194 aa17.05■□□□□ 0.32
HOXC6-202ENST00000394331 GUCA2AQ02747 115 aa17.05■□□□□ 0.32
HOXC6-202ENST00000394331 SKP2Q13309 424 aa17.05■□□□□ 0.32
HOXC6-202ENST00000394331 RHEBQ15382 184 aa17.05■□□□□ 0.32
HOXC6-202ENST00000394331 ANKRD39Q53RE8 183 aa17.05■□□□□ 0.32
HOXC6-202ENST00000394331 AWAT1Q58HT5 328 aa17.05■□□□□ 0.32
HOXC6-202ENST00000394331 CDK20Q8IZL9 346 aa17.05■□□□□ 0.32
HOXC6-202ENST00000394331 SLC35A4Q96G79 324 aa17.05■□□□□ 0.32
HOXC6-202ENST00000394331 SCARF2Q96GP6 870 aaPredicted RBP17.05■□□□□ 0.32
HOXC6-202ENST00000394331 MTHFD2LQ9H903 347 aaPredicted RBP17.05■□□□□ 0.32
HOXC6-202ENST00000394331 CHMP1AQ9HD42 196 aaPredicted RBP17.05■□□□□ 0.32
HOXC6-202ENST00000394331 TRBV5-5A0A0J9YX44 114 aa17.05■□□□□ 0.32
HOXC6-202ENST00000394331 PLRG1O43660 514 aaKnown RBP17.05■□□□□ 0.32
HOXC6-202ENST00000394331 RABIFP47224 123 aa17.05■□□□□ 0.32
HOXC6-202ENST00000394331 EIF5AP63241 154 aaKnown RBP17.05■□□□□ 0.32
HOXC6-202ENST00000394331 TCEAL6Q6IPX3 200 aa17.05■□□□□ 0.32
HOXC6-202ENST00000394331 RANBP3LQ86VV4 465 aaPredicted RBP17.05■□□□□ 0.32
HOXC6-202ENST00000394331 LRRC25Q8N386 305 aaPredicted RBP17.05■□□□□ 0.32
HOXC6-202ENST00000394331 NUBPLQ8TB37 319 aa17.05■□□□□ 0.32
HOXC6-202ENST00000394331 ATG5Q9H1Y0 275 aa17.05■□□□□ 0.32
HOXC6-202ENST00000394331 PARP11Q9NR21 331 aa17.05■□□□□ 0.32
HOXC6-202ENST00000394331 SLC2A8Q9NY64 477 aa17.05■□□□□ 0.32
HOXC6-202ENST00000394331 ATXN7L1Q9ULK2 861 aaPredicted RBP17.05■□□□□ 0.32
HOXC6-202ENST00000394331 MDC1Q14676 2089 aaKnown RBP17.05■□□□□ 0.32
HOXC6-202ENST00000394331 A0A0A6YYC8 382 aaPredicted RBP17.04■□□□□ 0.32
HOXC6-202ENST00000394331 hCG_1809904A0A1W2PP81 198 aa17.04■□□□□ 0.32
HOXC6-202ENST00000394331 A0A1W2PR64 198 aa17.04■□□□□ 0.32
HOXC6-202ENST00000394331 A0A1W2PRV1 198 aa17.04■□□□□ 0.32
HOXC6-202ENST00000394331 I3L1I5 382 aaPredicted RBP17.04■□□□□ 0.32
HOXC6-202ENST00000394331 CCSO14618 274 aa17.04■□□□□ 0.32
HOXC6-202ENST00000394331 MBTPS2O43462 519 aa17.04■□□□□ 0.32
HOXC6-202ENST00000394331 ZFPL1O95159 310 aa17.04■□□□□ 0.32
HOXC6-202ENST00000394331 IFNA2P01563 188 aa17.04■□□□□ 0.32
HOXC6-202ENST00000394331 ZNF735P0CB33 412 aa17.04■□□□□ 0.32
HOXC6-202ENST00000394331 NME1P15531 152 aaKnown RBP17.04■□□□□ 0.32
HOXC6-202ENST00000394331 FUT1P19526 365 aa17.04■□□□□ 0.32
HOXC6-202ENST00000394331 MPZP25189 248 aa17.04■□□□□ 0.32
HOXC6-202ENST00000394331 ZNF136P52737 540 aa17.04■□□□□ 0.32
HOXC6-202ENST00000394331 TBC1D3GQ6DHY5 549 aa17.04■□□□□ 0.32
HOXC6-202ENST00000394331 MFSD12Q6NUT3 480 aa17.04■□□□□ 0.32
HOXC6-202ENST00000394331 TMPRSS12Q86WS5 348 aa17.04■□□□□ 0.32
HOXC6-202ENST00000394331 OR4E2Q8NGC2 313 aa17.04■□□□□ 0.32
HOXC6-202ENST00000394331 C3orf49Q96BT1 292 aa17.04■□□□□ 0.32
HOXC6-202ENST00000394331 PHB2Q99623 299 aa17.04■□□□□ 0.32
HOXC6-202ENST00000394331 NMES1Q9C002 83 aa17.04■□□□□ 0.32
HOXC6-202ENST00000394331 C20orf141Q9NUB4 165 aa17.04■□□□□ 0.32
HOXC6-202ENST00000394331 FAM86C1Q9NVL1 165 aa17.04■□□□□ 0.32
HOXC6-202ENST00000394331 FBXO4Q9UKT5 387 aa17.04■□□□□ 0.32
HOXC6-202ENST00000394331 KIAA0100Q14667 2235 aaKnown RBP17.04■□□□□ 0.32
HOXC6-202ENST00000394331 TSTD3H0UI37 97 aa17.04■□□□□ 0.32
HOXC6-202ENST00000394331 FCMRO60667 390 aa17.04■□□□□ 0.32
HOXC6-202ENST00000394331 PDX1P52945 283 aa17.04■□□□□ 0.32
HOXC6-202ENST00000394331 HSD11B2P80365 405 aa17.04■□□□□ 0.32
HOXC6-202ENST00000394331 FOXO1Q12778 655 aa17.04■□□□□ 0.32
HOXC6-202ENST00000394331 EIPR1Q53HC9 387 aa17.04■□□□□ 0.32
HOXC6-202ENST00000394331 FRRS1Q6ZNA5 592 aa17.04■□□□□ 0.32
HOXC6-202ENST00000394331 CYB561A3Q8NBI2 242 aa17.04■□□□□ 0.32
HOXC6-202ENST00000394331 PFN4Q8NHR9 129 aa17.04■□□□□ 0.32
HOXC6-202ENST00000394331 LYPD6BQ8NI32 183 aa17.04■□□□□ 0.32
HOXC6-202ENST00000394331 OR2M4Q96R27 311 aa17.04■□□□□ 0.32
HOXC6-202ENST00000394331 MYADMQ96S97 322 aa17.04■□□□□ 0.32
HOXC6-202ENST00000394331 S100A13Q99584 98 aa17.04■□□□□ 0.32
HOXC6-202ENST00000394331 TTTY10Q9BZA0 68 aa17.04■□□□□ 0.32
HOXC6-202ENST00000394331 PLA2G2FQ9BZM2 168 aa17.04■□□□□ 0.32
HOXC6-202ENST00000394331 ADAM18Q9Y3Q7 739 aa17.04■□□□□ 0.32
HOXC6-202ENST00000394331 BTBD17A6NE02 478 aa17.03■□□□□ 0.32
HOXC6-202ENST00000394331 LYPD3O95274 346 aa17.03■□□□□ 0.32
HOXC6-202ENST00000394331 ITGA5P08648 1049 aa17.03■□□□□ 0.32
HOXC6-202ENST00000394331 LYL1P12980 280 aa17.03■□□□□ 0.32
HOXC6-202ENST00000394331 HIST2H3AQ71DI3 136 aa17.03■□□□□ 0.32
HOXC6-202ENST00000394331 VN1R4Q7Z5H5 301 aa17.03■□□□□ 0.32
HOXC6-202ENST00000394331 OR13C2Q8NGS9 318 aa17.03■□□□□ 0.32
HOXC6-202ENST00000394331 NT5CQ8TCD5 201 aa17.03■□□□□ 0.32
HOXC6-202ENST00000394331 GPBAR1Q8TDU6 330 aa17.03■□□□□ 0.32
HOXC6-202ENST00000394331 SLC22A18Q96BI1 424 aa17.03■□□□□ 0.32
HOXC6-202ENST00000394331 FGF22Q9HCT0 170 aa17.03■□□□□ 0.32
HOXC6-202ENST00000394331 LAMA2P24043 3122 aaKnown RBP17.03■□□□□ 0.32
HOXC6-202ENST00000394331 GYPBP06028 91 aa17.03■□□□□ 0.32
HOXC6-202ENST00000394331 CD1CP29017 333 aa17.03■□□□□ 0.32
HOXC6-202ENST00000394331 PSMB10P40306 273 aa17.03■□□□□ 0.32
HOXC6-202ENST00000394331 NUBP1P53384 320 aa17.03■□□□□ 0.32
HOXC6-202ENST00000394331 RAB1AP62820 205 aa17.03■□□□□ 0.32
HOXC6-202ENST00000394331 PLA2G7Q13093 441 aa17.03■□□□□ 0.32
HOXC6-202ENST00000394331 SRSF5Q13243 272 aaKnown RBP17.03■□□□□ 0.32
HOXC6-202ENST00000394331 ITPRIPL2Q3MIP1 535 aa17.03■□□□□ 0.32
HOXC6-202ENST00000394331 WDR88Q6ZMY6 472 aa17.03■□□□□ 0.32
HOXC6-202ENST00000394331 SLC16A11Q8NCK7 471 aa17.03■□□□□ 0.32
HOXC6-202ENST00000394331 DCUN1D4Q92564 292 aa17.03■□□□□ 0.32
HOXC6-202ENST00000394331 DVL3Q92997 716 aaPredicted RBP17.03■□□□□ 0.32
HOXC6-202ENST00000394331 BPIFA2Q96DR5 249 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms