RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 NRARPQ7Z6K4 114 aa13.13□□□□□ -0.31
PPARGC1B-203ENST00000394320 C1orf210Q8IVY1 113 aa13.13□□□□□ -0.31
PPARGC1B-203ENST00000394320 FAM71CQ8NEG0 241 aa13.13□□□□□ -0.31
PPARGC1B-203ENST00000394320 OR14K1Q8NGZ2 314 aa13.13□□□□□ -0.31
PPARGC1B-203ENST00000394320 OR2V1Q8NHB1 315 aa13.13□□□□□ -0.31
PPARGC1B-203ENST00000394320 ZNF799Q96GE5 643 aa13.13□□□□□ -0.31
PPARGC1B-203ENST00000394320 NUDT9Q9BW91 350 aa13.13□□□□□ -0.31
PPARGC1B-203ENST00000394320 OPA3Q9H6K4 179 aa13.13□□□□□ -0.31
PPARGC1B-203ENST00000394320 C12orf49Q9H741 205 aa13.13□□□□□ -0.31
PPARGC1B-203ENST00000394320 ACOXLQ9NUZ1 547 aa13.13□□□□□ -0.31
PPARGC1B-203ENST00000394320 NECAP2Q9NVZ3 263 aa13.13□□□□□ -0.31
PPARGC1B-203ENST00000394320 SCN4AP35499 1836 aa13.13□□□□□ -0.31
PPARGC1B-203ENST00000394320 A0A087WUJ7 227 aa13.13□□□□□ -0.31
PPARGC1B-203ENST00000394320 TRAV17A0A0B4J275 112 aa13.13□□□□□ -0.31
PPARGC1B-203ENST00000394320 APEX1P27695 318 aaKnown RBP13.13□□□□□ -0.31
PPARGC1B-203ENST00000394320 ACSM1Q08AH1 577 aa13.13□□□□□ -0.31
PPARGC1B-203ENST00000394320 NMNAT2Q9BZQ4 307 aa13.13□□□□□ -0.31
PPARGC1B-203ENST00000394320 OR11A1Q9GZK7 315 aa13.13□□□□□ -0.31
PPARGC1B-203ENST00000394320 GABARAPH6UMI1 98 aa13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 PMS2P2O95744 297 aa13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 MT-CO3P00414 261 aa13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 HOXB5P09067 269 aa13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 NOVA1P51513 510 aaKnown RBP13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 PMPCAQ10713 525 aa13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 OR2A2Q6IF42 318 aa13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 ZNF546Q86UE3 836 aa13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 EXD3Q8N9H8 876 aa13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 OR5D18Q8NGL1 313 aa13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 FCRL1Q96LA6 429 aa13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 CNTNAP3BQ96NU0 1288 aa13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 FAM173AQ9BQD7 235 aa13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 ZCCHC4Q9H5U6 513 aa13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 DHHO43323 396 aa13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 SPDEFO95238 335 aa13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 EMP3P54852 163 aa13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 RRAS2P62070 204 aaPredicted RBP13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 TPBGQ13641 420 aa13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 SHBQ15464 509 aa13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 C6orf183Q5T699 404 aa13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 JMJD6Q6NYC1 403 aaPredicted RBP13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 BEST4Q8NFU0 473 aa13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 UBE2FQ969M7 185 aa13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 PIGTQ969N2 578 aa13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 SMIM19Q96E16 107 aa13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 RNF170Q96K19 258 aa13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 DCLRE1CQ96SD1 692 aaKnown RBP13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 PDCD1LG2Q9BQ51 273 aa13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 USB1Q9BQ65 265 aaKnown RBP13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 ANKRD31Q8N7Z5 1873 aa13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 COL4A5P29400 1685 aa13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 A0A1W2PNR3 127 aa13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 OR6C6A6NF89 314 aa13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 TRABD2BA6NFA1 517 aa13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 IFNA17P01571 189 aa13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 LINC01555Q8NAE3 123 aa13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 OR52N5Q8NH56 324 aa13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 EID2BQ96D98 161 aa13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 OPALINQ96PE5 141 aa13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 ATF6BQ99941 703 aa13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 LUZP4Q9P127 313 aa13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 ZNF225Q9UK10 706 aa13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 R4GMQ9 66 aa13.12□□□□□ -0.31
PPARGC1B-203ENST00000394320 TCRBP04435 133 aa13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 CHRNB1P11230 501 aa13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 TUBG1P23258 451 aa13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 SNRPD2P62316 118 aaKnown RBP13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 BTG1P62324 171 aa13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 TMPRSS11FQ6ZWK6 438 aa13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 ZNF547Q8IVP9 402 aa13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 ADAMTSL1Q8N6G6 1762 aa13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 KIAA1217Q5T5P2 1943 aa13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 TMEM200CA6NKL6 621 aa13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 K7EQS6 105 aa13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 PPM1DO15297 605 aa13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 IFNA10P01566 189 aa13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 EMDP50402 254 aa13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 RAE1P78406 368 aaKnown RBP13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 CTU2Q2VPK5 515 aaKnown RBP13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 ZNF425Q6IV72 752 aa13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 ANKRD9Q96BM1 317 aaPredicted RBP13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 ZNF436Q9C0F3 470 aaPredicted RBP13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 DEFB127Q9H1M4 99 aa13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 UCK1Q9HA47 277 aa13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 C12orf10Q9HB07 376 aa13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 TAF1LQ8IZX4 1826 aa13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 SULT1C2O00338 296 aa13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 MSTNO14793 375 aa13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 CRYAAP02489 173 aa13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 SMIM18P0DKX4 95 aa13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 CLDN15P56746 228 aa13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 PCBP4P57723 403 aaKnown RBP13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 CDK5R1Q15078 307 aa13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 FBXW12Q6X9E4 464 aa13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 ZNF793Q6ZN11 406 aa13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 LHFPL2Q6ZUX7 228 aa13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 PLPP7Q8NBV4 271 aa13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 EMC7Q9NPA0 242 aa13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 CTSVO60911 334 aa13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 HEXAP06865 529 aa13.11□□□□□ -0.31
PPARGC1B-203ENST00000394320 PTGER4P35408 488 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms