RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 RLIMQ9NVW2 624 aa6.74□□□□□ -1.33
TRBV28-201ENST00000390400 RASL12Q9NYN1 266 aa6.74□□□□□ -1.33
TRBV28-201ENST00000390400 TAS2R16Q9NYV7 291 aa6.74□□□□□ -1.33
TRBV28-201ENST00000390400 MGAT4CQ9UBM8 478 aa6.74□□□□□ -1.33
TRBV28-201ENST00000390400 SPATA2Q9UM82 520 aa6.74□□□□□ -1.33
TRBV28-201ENST00000390400 MRPS7Q9Y2R9 242 aaKnown RBP6.74□□□□□ -1.33
TRBV28-201ENST00000390400 MMACHCQ9Y4U1 282 aa6.74□□□□□ -1.33
TRBV28-201ENST00000390400 POMT1Q9Y6A1 747 aa6.74□□□□□ -1.33
TRBV28-201ENST00000390400 CHD8Q9HCK8 2581 aa6.74□□□□□ -1.33
TRBV28-201ENST00000390400 VSTM2BA6NLU5 285 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 GABRR3A8MPY1 467 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 C21orf140B9A014 251 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 GTPBP1O00178 669 aaKnown RBP6.73□□□□□ -1.33
TRBV28-201ENST00000390400 SYT5O00445 386 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 PLPP2O43688 288 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 FGF17O60258 216 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 EIF1BO60739 113 aaKnown RBP6.73□□□□□ -1.33
TRBV28-201ENST00000390400 CTNSO60931 367 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 KHDRBS3O75525 346 aaKnown RBP6.73□□□□□ -1.33
TRBV28-201ENST00000390400 GCM2O75603 506 aaPredicted RBP6.73□□□□□ -1.33
TRBV28-201ENST00000390400 ERAL1O75616 437 aaKnown RBP6.73□□□□□ -1.33
TRBV28-201ENST00000390400 GPR75O95800 540 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 CFDP00746 253 aaPredicted RBP6.73□□□□□ -1.33
TRBV28-201ENST00000390400 HEXBP07686 556 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 CYC1P08574 325 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 LIMS3P0CW19 117 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 LIMS4P0CW20 117 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 VSIG10L2P0DP72 767 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 LIPCP11150 499 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 SLC2A1P11166 492 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 GYPEP15421 78 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 TCN2P20062 427 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 UQCRC2P22695 453 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 HTR1FP30939 366 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 NTSP30990 170 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 FOLR3P41439 243 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 EIF1P41567 113 aaKnown RBP6.73□□□□□ -1.33
TRBV28-201ENST00000390400 CTBP2P56545 445 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 HSD17B7P56937 341 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 RPS15P62841 145 aaKnown RBP6.73□□□□□ -1.33
TRBV28-201ENST00000390400 ID2Q02363 134 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 MXD1Q05195 221 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 SRSF4Q08170 494 aaKnown RBP6.73□□□□□ -1.33
TRBV28-201ENST00000390400 ERV3-1Q14264 604 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 HMGN3Q15651 99 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 ST3GAL2Q16842 350 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 VWA2Q5GFL6 755 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 IDNKQ5T6J7 187 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 RPL13AP3Q6NVV1 102 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 SLC48A1Q6P1K1 146 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 PGBD2Q6P3X8 592 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 SFXN4Q6P4A7 337 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 FAM199XQ6PEV8 388 aaPredicted RBP6.73□□□□□ -1.33
TRBV28-201ENST00000390400 MED25Q71SY5 747 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 RHOUQ7L0Q8 258 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 CHMP1BQ7LBR1 199 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 PXKQ7Z7A4 578 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 TCEANCQ8N8B7 351 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 C7orf57Q8NEG2 295 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 OR4K14Q8NGD5 310 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 OR9Q2Q8NGE9 314 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 GLYATL2Q8WU03 294 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 CFHR4Q92496 578 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 OSTF1Q92882 214 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 GCDHQ92947 438 aaPredicted RBP6.73□□□□□ -1.33
TRBV28-201ENST00000390400 EXOSC8Q96B26 276 aaKnown RBP6.73□□□□□ -1.33
TRBV28-201ENST00000390400 LRRC46Q96FV0 321 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 LRR1Q96L50 414 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 PTDSS2Q9BVG9 487 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 GPR87Q9BY21 358 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 VN1R1Q9GZP7 353 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 EGLN1Q9GZT9 426 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 SAV1Q9H4B6 383 aaPredicted RBP6.73□□□□□ -1.33
TRBV28-201ENST00000390400 OPA3Q9H6K4 179 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 METTL17Q9H7H0 456 aaPredicted RBP6.73□□□□□ -1.33
TRBV28-201ENST00000390400 AKIRIN1Q9H9L7 192 aaPredicted RBP6.73□□□□□ -1.33
TRBV28-201ENST00000390400 SLC35C2Q9NQQ7 365 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 PRTFDC1Q9NRG1 225 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 ZFP57Q9NU63 452 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 DNAJC27Q9NZQ0 273 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 C5AR2Q9P296 337 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 CLEC2DQ9UHP7 191 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 ZNF107Q9UII5 783 aaPredicted RBP6.73□□□□□ -1.33
TRBV28-201ENST00000390400 TINAGQ9UJW2 476 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 SLC9A8Q9Y2E8 581 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 PLEKHA6Q9Y2H5 1048 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 ZNF780BQ9Y6R6 833 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 CNTRLQ7Z7A1 2325 aa6.73□□□□□ -1.33
TRBV28-201ENST00000390400 ANKRD11Q6UB99 2663 aaPredicted RBP6.73□□□□□ -1.33
TRBV28-201ENST00000390400 AKAP13Q12802 2813 aa6.72□□□□□ -1.33
TRBV28-201ENST00000390400 SYNDIG1LA6NDD5 238 aa6.72□□□□□ -1.33
TRBV28-201ENST00000390400 PCP4L1A6NKN8 68 aa6.72□□□□□ -1.33
TRBV28-201ENST00000390400 ZNF729A6NN14 1252 aaPredicted RBP6.72□□□□□ -1.33
TRBV28-201ENST00000390400 A8MUA0 341 aa6.72□□□□□ -1.33
TRBV28-201ENST00000390400 IDSB3KWA1 339 aa6.72□□□□□ -1.33
TRBV28-201ENST00000390400 H3BN98 237 aa6.72□□□□□ -1.33
TRBV28-201ENST00000390400 SMLR1H3BR10 107 aa6.72□□□□□ -1.33
TRBV28-201ENST00000390400 M0R3H8 397 aa6.72□□□□□ -1.33
TRBV28-201ENST00000390400 UBE2CO00762 179 aa6.72□□□□□ -1.33
TRBV28-201ENST00000390400 OR10H3O60404 316 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms