RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 METTL21EPA6NDL7 271 aa13.53□□□□□ -0.24
CTNS-202ENST00000381870 SLC17A2O00624 439 aa13.53□□□□□ -0.24
CTNS-202ENST00000381870 P2RX6O15547 441 aa13.53□□□□□ -0.24
CTNS-202ENST00000381870 ERCC1P07992 297 aaPredicted RBP13.53□□□□□ -0.24
CTNS-202ENST00000381870 MAOAP21397 527 aa13.53□□□□□ -0.24
CTNS-202ENST00000381870 CCKBRP32239 447 aa13.53□□□□□ -0.24
CTNS-202ENST00000381870 EMDP50402 254 aa13.53□□□□□ -0.24
CTNS-202ENST00000381870 DMWDQ09019 674 aa13.53□□□□□ -0.24
CTNS-202ENST00000381870 CLINT1Q14677 625 aa13.53□□□□□ -0.24
CTNS-202ENST00000381870 ASPHD2Q6ICH7 369 aa13.53□□□□□ -0.24
CTNS-202ENST00000381870 PAPD4Q6PIY7 484 aaKnown RBP13.53□□□□□ -0.24
CTNS-202ENST00000381870 ZNF296Q8WUU4 475 aaPredicted RBP13.53□□□□□ -0.24
CTNS-202ENST00000381870 SAT2Q96F10 170 aaPredicted RBP13.53□□□□□ -0.24
CTNS-202ENST00000381870 COMMD4Q9H0A8 199 aa13.53□□□□□ -0.24
CTNS-202ENST00000381870 SYT4Q9H2B2 425 aa13.53□□□□□ -0.24
CTNS-202ENST00000381870 FN3KRPQ9HA64 309 aa13.53□□□□□ -0.24
CTNS-202ENST00000381870 CAPN10Q9HC96 672 aa13.53□□□□□ -0.24
CTNS-202ENST00000381870 SDHAF3Q9NRP4 125 aa13.53□□□□□ -0.24
CTNS-202ENST00000381870 XIRP2A4UGR9 3374 aa13.53□□□□□ -0.24
CTNS-202ENST00000381870 TRBV6-7A0A0A0MS04 114 aa13.53□□□□□ -0.24
CTNS-202ENST00000381870 TMEM235A6NFC5 223 aa13.53□□□□□ -0.24
CTNS-202ENST00000381870 C2orf74A8MZ97 194 aa13.53□□□□□ -0.24
CTNS-202ENST00000381870 DNAJB6O75190 326 aa13.53□□□□□ -0.24
CTNS-202ENST00000381870 FBXO24O75426 580 aa13.53□□□□□ -0.24
CTNS-202ENST00000381870 ARG1P05089 322 aa13.53□□□□□ -0.24
CTNS-202ENST00000381870 CD63P08962 238 aa13.53□□□□□ -0.24
CTNS-202ENST00000381870 HOXC4P09017 264 aaPredicted RBP13.53□□□□□ -0.24
CTNS-202ENST00000381870 GLP1RP43220 463 aa13.53□□□□□ -0.24
CTNS-202ENST00000381870 GSK3AP49840 483 aa13.53□□□□□ -0.24
CTNS-202ENST00000381870 ADAM8P78325 824 aa13.53□□□□□ -0.24
CTNS-202ENST00000381870 DPY19L2P2Q6ZN68 376 aa13.53□□□□□ -0.24
CTNS-202ENST00000381870 SLC16A9Q7RTY1 509 aa13.53□□□□□ -0.24
CTNS-202ENST00000381870 OR10H5Q8NGA6 315 aa13.53□□□□□ -0.24
CTNS-202ENST00000381870 SLAMF9Q96A28 289 aa13.53□□□□□ -0.24
CTNS-202ENST00000381870 SLC41A2Q96JW4 573 aa13.53□□□□□ -0.24
CTNS-202ENST00000381870 TAAR9Q96RI9 348 aa13.53□□□□□ -0.24
CTNS-202ENST00000381870 SLC46A2Q9BY10 475 aa13.53□□□□□ -0.24
CTNS-202ENST00000381870 KCNG2Q9UJ96 466 aa13.53□□□□□ -0.24
CTNS-202ENST00000381870 CACNA1CQ13936 2221 aa13.52□□□□□ -0.24
CTNS-202ENST00000381870 IFITM10A6NMD0 228 aa13.52□□□□□ -0.24
CTNS-202ENST00000381870 SNRNP200O75643 2136 aaKnown RBP13.52□□□□□ -0.24
CTNS-202ENST00000381870 PMELP40967 661 aa13.52□□□□□ -0.24
CTNS-202ENST00000381870 MLF2Q15773 248 aaPredicted RBP13.52□□□□□ -0.24
CTNS-202ENST00000381870 SLC22A6Q4U2R8 563 aa13.52□□□□□ -0.24
CTNS-202ENST00000381870 OTPQ5XKR4 325 aa13.52□□□□□ -0.24
CTNS-202ENST00000381870 METRNLQ641Q3 311 aa13.52□□□□□ -0.24
CTNS-202ENST00000381870 ARRDC1Q8N5I2 433 aa13.52□□□□□ -0.24
CTNS-202ENST00000381870 ZDHHC12Q96GR4 267 aa13.52□□□□□ -0.24
CTNS-202ENST00000381870 SRA1Q9HD15 236 aaKnown RBP13.52□□□□□ -0.24
CTNS-202ENST00000381870 OR5AC2Q9NZP5 309 aa13.52□□□□□ -0.24
CTNS-202ENST00000381870 SCN5AQ14524 2016 aa13.52□□□□□ -0.24
CTNS-202ENST00000381870 DCTN6O00399 190 aa13.52□□□□□ -0.25
CTNS-202ENST00000381870 LATO43561 262 aa13.52□□□□□ -0.25
CTNS-202ENST00000381870 OR8U9P0C7N5 309 aa13.52□□□□□ -0.25
CTNS-202ENST00000381870 ITGA3P26006 1051 aa13.52□□□□□ -0.25
CTNS-202ENST00000381870 ACAA2P42765 397 aaKnown RBP13.52□□□□□ -0.25
CTNS-202ENST00000381870 KIR3DL2P43630 455 aa13.52□□□□□ -0.25
CTNS-202ENST00000381870 BTNL8Q6UX41 500 aa13.52□□□□□ -0.25
CTNS-202ENST00000381870 SSX9Q7RTT3 188 aa13.52□□□□□ -0.25
CTNS-202ENST00000381870 OR8U1Q8NH10 309 aa13.52□□□□□ -0.25
CTNS-202ENST00000381870 SOCS4Q8WXH5 440 aa13.52□□□□□ -0.25
CTNS-202ENST00000381870 RBM18Q96H35 190 aaKnown RBP13.52□□□□□ -0.25
CTNS-202ENST00000381870 IGSF21Q96ID5 467 aa13.52□□□□□ -0.25
CTNS-202ENST00000381870 SLC17A9Q9BYT1 436 aa13.52□□□□□ -0.25
CTNS-202ENST00000381870 NRSN2Q9GZP1 204 aa13.52□□□□□ -0.25
CTNS-202ENST00000381870 WIF1Q9Y5W5 379 aa13.52□□□□□ -0.25
CTNS-202ENST00000381870 M0R036 132 aa13.51□□□□□ -0.25
CTNS-202ENST00000381870 SLC35G4P0C7Q5 338 aa13.51□□□□□ -0.25
CTNS-202ENST00000381870 DVL1P1P54792 670 aaPredicted RBP13.51□□□□□ -0.25
CTNS-202ENST00000381870 PMPCAQ10713 525 aa13.51□□□□□ -0.25
CTNS-202ENST00000381870 FAM166AQ6J272 317 aa13.51□□□□□ -0.25
CTNS-202ENST00000381870 LRRC69Q6ZNQ3 347 aa13.51□□□□□ -0.25
CTNS-202ENST00000381870 MTSS1LQ765P7 747 aa13.51□□□□□ -0.25
CTNS-202ENST00000381870 ZNF761Q86XN6 746 aaPredicted RBP13.51□□□□□ -0.25
CTNS-202ENST00000381870 ZNF584Q8IVC4 421 aa13.51□□□□□ -0.25
CTNS-202ENST00000381870 SLC43A2Q8N370 569 aa13.51□□□□□ -0.25
CTNS-202ENST00000381870 GVQW1Q8N7I0 195 aa13.51□□□□□ -0.25
CTNS-202ENST00000381870 RAB3CQ96E17 227 aa13.51□□□□□ -0.25
CTNS-202ENST00000381870 SLC17A5Q9NRA2 495 aa13.51□□□□□ -0.25
CTNS-202ENST00000381870 TMEM74BQ9NUR3 256 aa13.51□□□□□ -0.25
CTNS-202ENST00000381870 PLA2G2EQ9NZK7 142 aa13.51□□□□□ -0.25
CTNS-202ENST00000381870 CGGBP1Q9UFW8 167 aaPredicted RBP13.51□□□□□ -0.25
CTNS-202ENST00000381870 TMEM212A6NML5 194 aa13.51□□□□□ -0.25
CTNS-202ENST00000381870 EFSO43281 561 aa13.51□□□□□ -0.25
CTNS-202ENST00000381870 TACR3P29371 465 aa13.51□□□□□ -0.25
CTNS-202ENST00000381870 SLC6A9P48067 706 aa13.51□□□□□ -0.25
CTNS-202ENST00000381870 RAB5CP51148 216 aa13.51□□□□□ -0.25
CTNS-202ENST00000381870 RNASE10Q5GAN6 216 aaKnown RBP13.51□□□□□ -0.25
CTNS-202ENST00000381870 WDR38Q5JTN6 314 aa13.51□□□□□ -0.25
CTNS-202ENST00000381870 EXOSC6Q5RKV6 272 aaKnown RBP13.51□□□□□ -0.25
CTNS-202ENST00000381870 KIRREL2Q6UWL6 708 aa13.51□□□□□ -0.25
CTNS-202ENST00000381870 ZNF563Q8TA94 476 aa13.51□□□□□ -0.25
CTNS-202ENST00000381870 PPP1R14AQ96A00 147 aa13.51□□□□□ -0.25
CTNS-202ENST00000381870 MEGF10Q96KG7 1140 aa13.51□□□□□ -0.25
CTNS-202ENST00000381870 INSM2Q96T92 566 aaPredicted RBP13.51□□□□□ -0.25
CTNS-202ENST00000381870 PRRT1Q99946 306 aa13.51□□□□□ -0.25
CTNS-202ENST00000381870 LAMP5Q9UJQ1 280 aa13.51□□□□□ -0.25
CTNS-202ENST00000381870 ATXN7L1Q9ULK2 861 aaPredicted RBP13.51□□□□□ -0.25
CTNS-202ENST00000381870 DBX1A6NMT0 343 aa13.5□□□□□ -0.25
CTNS-202ENST00000381870 H7C1C5 153 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms