RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 DNASE1L1P49184 302 aa17.36■□□□□ 0.37
SSU72-204ENST00000378726 DAP3P51398 398 aaKnown RBP17.36■□□□□ 0.37
SSU72-204ENST00000378726 DGCR2P98153 550 aa17.36■□□□□ 0.37
SSU72-204ENST00000378726 TRAM1Q15629 374 aa17.36■□□□□ 0.37
SSU72-204ENST00000378726 ETFDHQ16134 617 aa17.36■□□□□ 0.37
SSU72-204ENST00000378726 DPY19L4Q7Z388 723 aa17.36■□□□□ 0.37
SSU72-204ENST00000378726 SYT9Q86SS6 491 aa17.36■□□□□ 0.37
SSU72-204ENST00000378726 IL22RA1Q8N6P7 574 aa17.36■□□□□ 0.37
SSU72-204ENST00000378726 OR6N2Q8NGY6 317 aa17.36■□□□□ 0.37
SSU72-204ENST00000378726 NKD1Q969G9 470 aa17.36■□□□□ 0.37
SSU72-204ENST00000378726 TMEM41AQ96HV5 264 aa17.36■□□□□ 0.37
SSU72-204ENST00000378726 FOXN4Q96NZ1 517 aa17.36■□□□□ 0.37
SSU72-204ENST00000378726 INTS14Q96SY0 518 aa17.36■□□□□ 0.37
SSU72-204ENST00000378726 FAM117AQ9C073 453 aa17.36■□□□□ 0.37
SSU72-204ENST00000378726 B3GNT4Q9C0J1 378 aa17.36■□□□□ 0.37
SSU72-204ENST00000378726 MED29Q9NX70 200 aa17.36■□□□□ 0.37
SSU72-204ENST00000378726 LAMP5Q9UJQ1 280 aa17.36■□□□□ 0.37
SSU72-204ENST00000378726 ELF5Q9UKW6 265 aaPredicted RBP17.36■□□□□ 0.37
SSU72-204ENST00000378726 HDGFL3Q9Y3E1 203 aa17.36■□□□□ 0.37
SSU72-204ENST00000378726 NUBP2Q9Y5Y2 271 aa17.36■□□□□ 0.37
SSU72-204ENST00000378726 A6NIZ1 184 aa17.36■□□□□ 0.37
SSU72-204ENST00000378726 PRR32B1ATL7 298 aa17.36■□□□□ 0.37
SSU72-204ENST00000378726 B8ZZF3 427 aa17.36■□□□□ 0.37
SSU72-204ENST00000378726 SHOXO15266 292 aa17.36■□□□□ 0.37
SSU72-204ENST00000378726 CTLA4P16410 223 aa17.36■□□□□ 0.37
SSU72-204ENST00000378726 PSMB10P40306 273 aa17.36■□□□□ 0.37
SSU72-204ENST00000378726 CYB561P49447 251 aa17.36■□□□□ 0.37
SSU72-204ENST00000378726 CCR6P51684 374 aa17.36■□□□□ 0.37
SSU72-204ENST00000378726 AP2S1P53680 142 aaPredicted RBP17.36■□□□□ 0.37
SSU72-204ENST00000378726 RAP1BP61224 184 aa17.36■□□□□ 0.37
SSU72-204ENST00000378726 RAP1AP62834 184 aa17.36■□□□□ 0.37
SSU72-204ENST00000378726 OC90Q02509 493 aaPredicted RBP17.36■□□□□ 0.37
SSU72-204ENST00000378726 ZNF684Q5T5D7 378 aa17.36■□□□□ 0.37
SSU72-204ENST00000378726 RPL22L1Q6P5R6 122 aaKnown RBP17.36■□□□□ 0.37
SSU72-204ENST00000378726 IDO2Q6ZQW0 420 aa17.36■□□□□ 0.37
SSU72-204ENST00000378726 TOMM5Q8N4H5 51 aa17.36■□□□□ 0.37
SSU72-204ENST00000378726 ADAMTS17Q8TE56 1095 aa17.36■□□□□ 0.37
SSU72-204ENST00000378726 KLHL15Q96M94 604 aa17.36■□□□□ 0.37
SSU72-204ENST00000378726 FANCFQ9NPI8 374 aa17.36■□□□□ 0.37
SSU72-204ENST00000378726 KCNN3Q9UGI6 736 aa17.36■□□□□ 0.37
SSU72-204ENST00000378726 DKKL1Q9UK85 242 aa17.36■□□□□ 0.37
SSU72-204ENST00000378726 MRPS7Q9Y2R9 242 aaKnown RBP17.36■□□□□ 0.37
SSU72-204ENST00000378726 KLHDC2Q9Y2U9 406 aa17.36■□□□□ 0.37
SSU72-204ENST00000378726 SNRPBP14678 240 aaKnown RBP17.35■□□□□ 0.37
SSU72-204ENST00000378726 RAB3BP20337 219 aa17.35■□□□□ 0.37
SSU72-204ENST00000378726 RPS27P42677 84 aaKnown RBP17.35■□□□□ 0.37
SSU72-204ENST00000378726 CDK5R1Q15078 307 aa17.35■□□□□ 0.37
SSU72-204ENST00000378726 RAET1LQ5VY80 246 aa17.35■□□□□ 0.37
SSU72-204ENST00000378726 TEX261Q6UWH6 196 aa17.35■□□□□ 0.37
SSU72-204ENST00000378726 ESPNLQ6ZVH7 1005 aa17.35■□□□□ 0.37
SSU72-204ENST00000378726 MS4A15Q8N5U1 240 aa17.35■□□□□ 0.37
SSU72-204ENST00000378726 ZFP3Q96NJ6 502 aa17.35■□□□□ 0.37
SSU72-204ENST00000378726 RANBP3Q9H6Z4 567 aaPredicted RBP17.35■□□□□ 0.37
SSU72-204ENST00000378726 PRELID1Q9Y255 219 aa17.35■□□□□ 0.37
SSU72-204ENST00000378726 U3KQ87 197 aa17.35■□□□□ 0.37
SSU72-204ENST00000378726 IGLV1-36A0A0B4J1U3 117 aa17.35■□□□□ 0.37
SSU72-204ENST00000378726 TRBV2A0A0J9YWF9 115 aa17.35■□□□□ 0.37
SSU72-204ENST00000378726 NPIPB13A6NJU9 1138 aa17.35■□□□□ 0.37
SSU72-204ENST00000378726 NPIPB4C9JG80 1138 aa17.35■□□□□ 0.37
SSU72-204ENST00000378726 SLC22A5O76082 557 aa17.35■□□□□ 0.37
SSU72-204ENST00000378726 F10P00742 488 aa17.35■□□□□ 0.37
SSU72-204ENST00000378726 ATF1P18846 271 aa17.35■□□□□ 0.37
SSU72-204ENST00000378726 EDNRAP25101 427 aa17.35■□□□□ 0.37
SSU72-204ENST00000378726 CRABP1P29762 137 aa17.35■□□□□ 0.37
SSU72-204ENST00000378726 TOMM20Q15388 145 aa17.35■□□□□ 0.37
SSU72-204ENST00000378726 JMJD6Q6NYC1 403 aaPredicted RBP17.35■□□□□ 0.37
SSU72-204ENST00000378726 KCTD20Q7Z5Y7 419 aa17.35■□□□□ 0.37
SSU72-204ENST00000378726 ZNF227Q86WZ6 799 aa17.35■□□□□ 0.37
SSU72-204ENST00000378726 WDFY1Q8IWB7 410 aa17.35■□□□□ 0.37
SSU72-204ENST00000378726 THEM6Q8WUY1 208 aa17.35■□□□□ 0.37
SSU72-204ENST00000378726 MAP6Q96JE9 813 aa17.35■□□□□ 0.37
SSU72-204ENST00000378726 MNTQ99583 582 aa17.35■□□□□ 0.37
SSU72-204ENST00000378726 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.35■□□□□ 0.37
SSU72-204ENST00000378726 B3GAT1Q9P2W7 334 aa17.35■□□□□ 0.37
SSU72-204ENST00000378726 SPEF1Q9Y4P9 236 aa17.35■□□□□ 0.37
SSU72-204ENST00000378726 OR2M5A3KFT3 312 aa17.34■□□□□ 0.37
SSU72-204ENST00000378726 SULT2B1O00204 365 aa17.34■□□□□ 0.37
SSU72-204ENST00000378726 ZNF593O00488 134 aaPredicted RBP17.34■□□□□ 0.37
SSU72-204ENST00000378726 TACSTD2P09758 323 aa17.34■□□□□ 0.37
SSU72-204ENST00000378726 ANXA3P12429 323 aa17.34■□□□□ 0.37
SSU72-204ENST00000378726 ALOX5APP20292 161 aa17.34■□□□□ 0.37
SSU72-204ENST00000378726 PRKACBP22694 351 aa17.34■□□□□ 0.37
SSU72-204ENST00000378726 GDI2P50395 445 aaKnown RBP17.34■□□□□ 0.37
SSU72-204ENST00000378726 BLVRAP53004 296 aa17.34■□□□□ 0.37
SSU72-204ENST00000378726 GABREP78334 506 aa17.34■□□□□ 0.37
SSU72-204ENST00000378726 DCAF10Q5QP82 559 aa17.34■□□□□ 0.37
SSU72-204ENST00000378726 HACD4Q5VWC8 232 aa17.34■□□□□ 0.37
SSU72-204ENST00000378726 OTPQ5XKR4 325 aa17.34■□□□□ 0.37
SSU72-204ENST00000378726 CD276Q5ZPR3 534 aa17.34■□□□□ 0.37
SSU72-204ENST00000378726 TMEM225Q6GV28 225 aa17.34■□□□□ 0.37
SSU72-204ENST00000378726 MTFR2Q6P444 385 aa17.34■□□□□ 0.37
SSU72-204ENST00000378726 TMPPEQ6ZT21 453 aa17.34■□□□□ 0.37
SSU72-204ENST00000378726 SMIM19Q96E16 107 aa17.34■□□□□ 0.37
SSU72-204ENST00000378726 OR2M2Q96R28 347 aa17.34■□□□□ 0.37
SSU72-204ENST00000378726 EMC6Q9BV81 110 aa17.34■□□□□ 0.37
SSU72-204ENST00000378726 HEXA-AS1Q9H8Q6 139 aa17.34■□□□□ 0.37
SSU72-204ENST00000378726 TMEM14AQ9Y6G1 99 aa17.34■□□□□ 0.37
SSU72-204ENST00000378726 MED12Q93074 2177 aa17.34■□□□□ 0.37
SSU72-204ENST00000378726 A0A0G2JMM0 328 aa17.33■□□□□ 0.37
SSU72-204ENST00000378726 A0A1W2PNV4 684 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms