RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 IL19Q9UHD0 177 aa8.08□□□□□ -1.12
LIG3-202ENST00000378526 KIAA2026Q5HYC2 2103 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 TMEM269A0A1B0GVZ9 245 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 DIRC3C9JPN6 131 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 APBB3O95704 486 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 CST4P01036 141 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 HNRNPA1P09651 372 aaKnown RBP eCLIP8.07□□□□□ -1.12
LIG3-202ENST00000378526 TIMP2P16035 220 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 ERHP84090 104 aaKnown RBP8.07□□□□□ -1.12
LIG3-202ENST00000378526 HNRNPA1L2Q32P51 320 aaKnown RBP8.07□□□□□ -1.12
LIG3-202ENST00000378526 NSUN5P2Q63ZY6 315 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 C11orf87Q6NUJ2 197 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 MFSD4AQ8N468 514 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 OR8D4Q8NGM9 314 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 PPP1R1CQ8WVI7 109 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 NTNG2Q96CW9 530 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 MBOAT4Q96T53 435 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 DUSP21Q9H596 190 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.07□□□□□ -1.12
LIG3-202ENST00000378526 RNF19AQ9NV58 838 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 MARCH4Q9P2E8 410 aaPredicted RBP8.07□□□□□ -1.12
LIG3-202ENST00000378526 NWD1Q149M9 1564 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 TMEM94Q12767 1356 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 KMT2EQ8IZD2 1858 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 OR2A25A4D2G3 310 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 IFITM10A6NMD0 228 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 TMEM262E9PQX1 116 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 CNIH1O95406 144 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 ASGR2P07307 311 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 MPC1LP0DKB6 136 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 EDN3P14138 238 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 BCL3P20749 454 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 SNRPGP62308 76 aaKnown RBP8.07□□□□□ -1.12
LIG3-202ENST00000378526 TEX29Q8N6K0 151 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 OR10G3Q8NGC4 313 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 TINAGL1Q9GZM7 467 aaPredicted RBP8.07□□□□□ -1.12
LIG3-202ENST00000378526 AAMDCQ9H7C9 122 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 DIMT1Q9UNQ2 313 aaKnown RBP8.07□□□□□ -1.12
LIG3-202ENST00000378526 SPINT2O43291 252 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 IL5P05113 134 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 FBXO45P0C2W1 286 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 BRS3P32247 399 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 RAET1LQ5VY80 246 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 NXNL2Q5VZ03 156 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 PODNL1Q6PEZ8 512 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 DPPA3Q6W0C5 159 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 UBALD2Q8IYN6 164 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 HRASLS5Q96KN8 279 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 S1PR3Q99500 378 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 TMEM70Q9BUB7 260 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 SPATC1LQ9H0A9 340 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 SYN3O14994 580 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 ZNF93P35789 620 aaPredicted RBP8.07□□□□□ -1.12
LIG3-202ENST00000378526 CRYBB1P53674 252 aaPredicted RBP8.07□□□□□ -1.12
LIG3-202ENST00000378526 UBE2MP61081 183 aaKnown RBP8.07□□□□□ -1.12
LIG3-202ENST00000378526 LYG2Q86SG7 212 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 TAC4Q86UU9 113 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 NSUN5Q96P11 429 aaKnown RBP8.07□□□□□ -1.12
LIG3-202ENST00000378526 NAGKQ9UJ70 344 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 KCNK6Q9Y257 313 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 GPR55Q9Y2T6 319 aaPredicted RBP8.07□□□□□ -1.12
LIG3-202ENST00000378526 TCRBV7S3A2A0A539 114 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 PRSS1P07477 247 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 NPY4RP50391 375 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 PAFAH1B3Q15102 231 aaKnown RBP8.07□□□□□ -1.12
LIG3-202ENST00000378526 UBE2V2Q15819 145 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 ACKR1Q16570 336 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 NKAIN1Q4KMZ8 207 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 GDPD3Q7L5L3 318 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 YRDCQ86U90 279 aaKnown RBP8.07□□□□□ -1.12
LIG3-202ENST00000378526 NUDT10Q8NFP7 164 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 VN1R17PQ8TDU5 208 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 NUDT11Q96G61 164 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 DPH2Q9BQC3 489 aaPredicted RBP8.07□□□□□ -1.12
LIG3-202ENST00000378526 NID2Q14112 1375 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 ALDOAP04075 364 aaKnown RBP8.07□□□□□ -1.12
LIG3-202ENST00000378526 CD1DP15813 335 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 PTGFRP43088 359 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 NPBWR2P48146 333 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 C19orf57Q0VDD7 668 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 OR7E24Q6IFN5 339 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 TMEM116Q8NCL8 245 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 SH3RF2Q8TEC5 729 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 DDA1Q9BW61 102 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 RBM24Q9BX46 236 aaKnown RBP8.07□□□□□ -1.12
LIG3-202ENST00000378526 CNIH4Q9P003 139 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 NAT8Q9UHE5 227 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 IER3IP1Q9Y5U9 82 aa8.07□□□□□ -1.12
LIG3-202ENST00000378526 OR7C1O76099 320 aaPredicted RBP8.06□□□□□ -1.12
LIG3-202ENST00000378526 IGHG1P01857 330 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 OR5AC1P0C628 307 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 ZNF8P17098 575 aaPredicted RBP8.06□□□□□ -1.12
LIG3-202ENST00000378526 HLA-DRB5Q30154 266 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 FAHD2BQ6P2I3 314 aaPredicted RBP8.06□□□□□ -1.12
LIG3-202ENST00000378526 OR2AK2Q8NG84 335 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 SOCS4Q8WXH5 440 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 KHSRPQ92945 711 aaKnown RBP eCLIP8.06□□□□□ -1.12
LIG3-202ENST00000378526 FAHD2AQ96GK7 314 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 WDR76Q9H967 626 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 PSG11Q9UQ72 335 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms