RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 IL5P05113 134 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 CD79AP11912 226 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 CD22P20273 847 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 B4GALNT1Q00973 533 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 MZT1Q08AG7 82 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 DBPQ10586 325 aaPredicted RBP7.66□□□□□ -1.18
VPS36-201ENST00000378060 TMEM201Q5SNT2 666 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 LIX1LQ8IVB5 337 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 FAM213BQ8TBF2 198 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 OR1E3Q8WZA6 343 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 FRZBQ92765 325 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 TSSK2Q96PF2 358 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 NUDT22Q9BRQ3 303 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 POFUT1Q9H488 388 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 EXOSC3Q9NQT5 275 aaKnown RBP7.66□□□□□ -1.18
VPS36-201ENST00000378060 CA5BQ9Y2D0 317 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 PTRH2Q9Y3E5 179 aaKnown RBP7.66□□□□□ -1.18
VPS36-201ENST00000378060 PUS1Q9Y606 427 aaKnown RBP eCLIP7.66□□□□□ -1.18
VPS36-201ENST00000378060 WDR87Q6ZQQ6 2873 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 OR5K3A6NET4 321 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 TRIM64A6NGJ6 449 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 ATP6V1G2-DDX39BF2Z307 99 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 GPR171O14626 319 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 OIP5O43482 229 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 PRICKLE3O43900 615 aaPredicted RBP7.66□□□□□ -1.18
VPS36-201ENST00000378060 C8orf82Q6P1X6 216 aaPredicted RBP7.66□□□□□ -1.18
VPS36-201ENST00000378060 CD300LDQ6UXZ3 194 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 SLC16A14Q7RTX9 510 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 DCXRQ7Z4W1 244 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 GJC3Q8NFK1 279 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 OR2A1Q8NGT9 310 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 POC1BQ8TC44 478 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 CPT1CQ8TCG5 803 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 CNRIP1Q96F85 164 aaPredicted RBP7.66□□□□□ -1.18
VPS36-201ENST00000378060 CSF3RQ99062 836 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 NIPSNAP3BQ9BS92 247 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 PAPOLGQ9BWT3 736 aaKnown RBP7.66□□□□□ -1.18
VPS36-201ENST00000378060 MOB1AQ9H8S9 216 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 ZMAT3Q9HA38 289 aaKnown RBP7.66□□□□□ -1.18
VPS36-201ENST00000378060 A4GNTQ9UNA3 340 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 B3GALT5Q9Y2C3 310 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 JTBO76095 146 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 ACTL6BO94805 426 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 NSA2O95478 260 aaKnown RBP7.66□□□□□ -1.18
VPS36-201ENST00000378060 ICAM2P13598 275 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 DPP4P27487 766 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 PSMB6P28072 239 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 CD79BP40259 229 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 PPICP45877 212 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 HTR5AP47898 357 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 C21orf58P58505 322 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 RAB4BP61018 213 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 FOXK1P85037 733 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 CDK5Q00535 292 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 ZNF74Q16587 644 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 CLLU1Q5K131 121 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 KCNIP4Q6PIL6 250 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 GLIPR1L1Q6UWM5 242 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 SYT9Q86SS6 491 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 MRPL41Q8IXM3 137 aaKnown RBP7.66□□□□□ -1.18
VPS36-201ENST00000378060 MAP3K3Q99759 626 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 NKX6-2Q9C056 277 aaPredicted RBP7.66□□□□□ -1.18
VPS36-201ENST00000378060 IL21Q9HBE4 155 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 MBNL1Q9NR56 388 aaKnown RBP7.66□□□□□ -1.18
VPS36-201ENST00000378060 CA14Q9ULX7 337 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 C2orf16Q68DN1 1984 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 FITM1A5D6W6 292 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 OR6C6A6NF89 314 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 OR5H14A6NHG9 310 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 ZNF705FA8MVS1 300 aaPredicted RBP7.66□□□□□ -1.18
VPS36-201ENST00000378060 SHOXO15266 292 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 YY2O15391 372 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 AKR7A2O43488 359 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 FGF17O60258 216 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 LILRB5O75023 590 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 ZNF705DP0CH99 300 aaPredicted RBP7.66□□□□□ -1.18
VPS36-201ENST00000378060 ZNF705BP0CI00 300 aaPredicted RBP7.66□□□□□ -1.18
VPS36-201ENST00000378060 SPNP16150 400 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 CATR1Q13166 79 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 CAMK2BQ13554 666 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 TMEM81Q6P7N7 255 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 RABEPKQ7Z6M1 372 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 LINC00346Q8IVM7 164 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 ZNF683Q8IZ20 524 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 BBS1Q8NFJ9 593 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 ST7LQ8TDW4 575 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 C22orf15Q8WYQ4 148 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 NXPE3Q969Y0 559 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 SEH1LQ96EE3 360 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 ULBP3Q9BZM4 244 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 SPNS1Q9H2V7 528 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 GFOD1Q9NXC2 390 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 SPHK1Q9NYA1 384 aa7.66□□□□□ -1.18
VPS36-201ENST00000378060 NXT1Q9UKK6 140 aaKnown RBP7.66□□□□□ -1.18
VPS36-201ENST00000378060 ZC3H12DA2A288 527 aaKnown RBP7.65□□□□□ -1.18
VPS36-201ENST00000378060 ZNF749O43361 778 aa7.65□□□□□ -1.18
VPS36-201ENST00000378060 LAMTOR5O43504 91 aa7.65□□□□□ -1.18
VPS36-201ENST00000378060 SCGB2A1O75556 95 aa7.65□□□□□ -1.18
VPS36-201ENST00000378060 IRF2P14316 349 aa7.65□□□□□ -1.18
VPS36-201ENST00000378060 MGMTP16455 207 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms