RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 CLDN25C9JDP6 229 aa17.92■□□□□ 0.46
VSX1-201ENST00000376707 CST2P09228 141 aa17.92■□□□□ 0.46
VSX1-201ENST00000376707 PRDX6P30041 224 aa17.92■□□□□ 0.46
VSX1-201ENST00000376707 SLC9A3P48764 834 aa17.92■□□□□ 0.46
VSX1-201ENST00000376707 RAP1BP61224 184 aa17.92■□□□□ 0.46
VSX1-201ENST00000376707 PSME3P61289 254 aa17.92■□□□□ 0.46
VSX1-201ENST00000376707 PCBD1P61457 104 aa17.92■□□□□ 0.46
VSX1-201ENST00000376707 RAP1AP62834 184 aa17.92■□□□□ 0.46
VSX1-201ENST00000376707 SCGB2A2Q13296 93 aa17.92■□□□□ 0.46
VSX1-201ENST00000376707 HFEQ30201 348 aa17.92■□□□□ 0.46
VSX1-201ENST00000376707 MBOAT2Q6ZWT7 520 aa17.92■□□□□ 0.46
VSX1-201ENST00000376707 FKBP9P1Q75LS8 142 aa17.92■□□□□ 0.46
VSX1-201ENST00000376707 TSEN54Q7Z6J9 526 aaKnown RBP17.92■□□□□ 0.46
VSX1-201ENST00000376707 OAFQ86UD1 273 aa17.92■□□□□ 0.46
VSX1-201ENST00000376707 MEX3DQ86XN8 651 aaKnown RBP17.92■□□□□ 0.46
VSX1-201ENST00000376707 IPCEF1Q8WWN9 437 aaPredicted RBP17.92■□□□□ 0.46
VSX1-201ENST00000376707 OR2H1Q9GZK4 316 aa17.92■□□□□ 0.46
VSX1-201ENST00000376707 ANKRD19PQ9H560 264 aa17.92■□□□□ 0.46
VSX1-201ENST00000376707 ZNF665Q9H7R5 613 aa17.92■□□□□ 0.46
VSX1-201ENST00000376707 TIMM10BQ9Y5J6 103 aa17.92■□□□□ 0.46
VSX1-201ENST00000376707 SPRY3O43610 288 aa17.91■□□□□ 0.46
VSX1-201ENST00000376707 MPV17P39210 176 aa17.91■□□□□ 0.46
VSX1-201ENST00000376707 FAM209AQ5JX71 171 aa17.91■□□□□ 0.46
VSX1-201ENST00000376707 ACSM5Q6NUN0 579 aa17.91■□□□□ 0.46
VSX1-201ENST00000376707 FAHD2BQ6P2I3 314 aaPredicted RBP17.91■□□□□ 0.46
VSX1-201ENST00000376707 ZNF730Q6ZMV8 503 aa17.91■□□□□ 0.46
VSX1-201ENST00000376707 TMPRSS11FQ6ZWK6 438 aa17.91■□□□□ 0.46
VSX1-201ENST00000376707 C1orf174Q8IYL3 243 aa17.91■□□□□ 0.46
VSX1-201ENST00000376707 ABHD4Q8TB40 342 aa17.91■□□□□ 0.46
VSX1-201ENST00000376707 SLC25A40Q8TBP6 338 aa17.91■□□□□ 0.46
VSX1-201ENST00000376707 FAM162AQ96A26 154 aa17.91■□□□□ 0.46
VSX1-201ENST00000376707 RAB39BQ96DA2 213 aa17.91■□□□□ 0.46
VSX1-201ENST00000376707 ELMOD3Q96FG2 381 aa17.91■□□□□ 0.46
VSX1-201ENST00000376707 FAHD2AQ96GK7 314 aa17.91■□□□□ 0.46
VSX1-201ENST00000376707 MARS2Q96GW9 593 aaKnown RBP17.91■□□□□ 0.46
VSX1-201ENST00000376707 TIMD4Q96H15 378 aa17.91■□□□□ 0.46
VSX1-201ENST00000376707 OR2J1Q9GZK6 312 aa17.91■□□□□ 0.46
VSX1-201ENST00000376707 WNT5BQ9H1J7 359 aa17.91■□□□□ 0.46
VSX1-201ENST00000376707 NMNAT1Q9HAN9 279 aaPredicted RBP17.91■□□□□ 0.46
VSX1-201ENST00000376707 SPAG4Q9NPE6 437 aa17.91■□□□□ 0.46
VSX1-201ENST00000376707 ENPP4Q9Y6X5 453 aa17.91■□□□□ 0.46
VSX1-201ENST00000376707 SNX3O60493 162 aa17.9■□□□□ 0.46
VSX1-201ENST00000376707 NCK1P16333 377 aa17.9■□□□□ 0.46
VSX1-201ENST00000376707 MSR1P21757 451 aa17.9■□□□□ 0.46
VSX1-201ENST00000376707 PPP1CBP62140 327 aa17.9■□□□□ 0.46
VSX1-201ENST00000376707 MBNL2Q5VZF2 373 aaKnown RBP17.9■□□□□ 0.46
VSX1-201ENST00000376707 RFPL4BQ6ZWI9 263 aa17.9■□□□□ 0.46
VSX1-201ENST00000376707 CYP4Z1Q86W10 505 aa17.9■□□□□ 0.46
VSX1-201ENST00000376707 OR13C2Q8NGS9 318 aa17.9■□□□□ 0.46
VSX1-201ENST00000376707 KLF14Q8TD94 323 aaPredicted RBP17.9■□□□□ 0.46
VSX1-201ENST00000376707 RAB1CQ92928 201 aa17.9■□□□□ 0.46
VSX1-201ENST00000376707 RPS6KA6Q9UK32 745 aa17.9■□□□□ 0.46
VSX1-201ENST00000376707 WIPI2Q9Y4P8 454 aa17.9■□□□□ 0.46
VSX1-201ENST00000376707 CACNG2Q9Y698 323 aa17.9■□□□□ 0.46
VSX1-201ENST00000376707 C12orf71A8MTZ7 269 aa17.89■□□□□ 0.45
VSX1-201ENST00000376707 MPZL1O95297 269 aa17.89■□□□□ 0.45
VSX1-201ENST00000376707 PNPP00491 289 aa17.89■□□□□ 0.45
VSX1-201ENST00000376707 IGHV1-46P01743 117 aa17.89■□□□□ 0.45
VSX1-201ENST00000376707 RPL4P36578 427 aaKnown RBP17.89■□□□□ 0.45
VSX1-201ENST00000376707 MMP15P51511 669 aa17.89■□□□□ 0.45
VSX1-201ENST00000376707 ZNF774Q6NX45 483 aa17.89■□□□□ 0.45
VSX1-201ENST00000376707 TBPL2Q6SJ96 375 aa17.89■□□□□ 0.45
VSX1-201ENST00000376707 ARL9Q6T311 187 aa17.89■□□□□ 0.45
VSX1-201ENST00000376707 THSD4Q6ZMP0 1018 aa17.89■□□□□ 0.45
VSX1-201ENST00000376707 FOXL2NBQ6ZUU3 175 aa17.89■□□□□ 0.45
VSX1-201ENST00000376707 TEX29Q8N6K0 151 aa17.89■□□□□ 0.45
VSX1-201ENST00000376707 SLC7A13Q8TCU3 470 aa17.89■□□□□ 0.45
VSX1-201ENST00000376707 EGLN1Q9GZT9 426 aa17.89■□□□□ 0.45
VSX1-201ENST00000376707 ELOVL3Q9HB03 270 aa17.89■□□□□ 0.45
VSX1-201ENST00000376707 CYSLTR2Q9NS75 346 aa17.89■□□□□ 0.45
VSX1-201ENST00000376707 A0A0A6YYJ9 748 aa17.88■□□□□ 0.45
VSX1-201ENST00000376707 A0A1W2PRQ8 180 aa17.88■□□□□ 0.45
VSX1-201ENST00000376707 H7C1C5 153 aa17.88■□□□□ 0.45
VSX1-201ENST00000376707 CDC42EP2O14613 210 aa17.88■□□□□ 0.45
VSX1-201ENST00000376707 LIPAP38571 399 aa17.88■□□□□ 0.45
VSX1-201ENST00000376707 ARHGDIAP52565 204 aa17.88■□□□□ 0.45
VSX1-201ENST00000376707 LCN6P62502 163 aa17.88■□□□□ 0.45
VSX1-201ENST00000376707 DGCR6Q14129 220 aa17.88■□□□□ 0.45
VSX1-201ENST00000376707 ENDOGQ14249 297 aaKnown RBP17.88■□□□□ 0.45
VSX1-201ENST00000376707 RRM2BQ7LG56 351 aa17.88■□□□□ 0.45
VSX1-201ENST00000376707 CCL17Q92583 94 aa17.88■□□□□ 0.45
VSX1-201ENST00000376707 C4orf45Q96LM5 186 aa17.88■□□□□ 0.45
VSX1-201ENST00000376707 NSRP1Q9H0G5 558 aaKnown RBP17.88■□□□□ 0.45
VSX1-201ENST00000376707 DCAF13Q9NV06 445 aaKnown RBP17.88■□□□□ 0.45
VSX1-201ENST00000376707 NDUFAF4Q9P032 175 aa17.88■□□□□ 0.45
VSX1-201ENST00000376707 GRHPRQ9UBQ7 328 aa17.88■□□□□ 0.45
VSX1-201ENST00000376707 CGGBP1Q9UFW8 167 aaPredicted RBP17.88■□□□□ 0.45
VSX1-201ENST00000376707 NDRG4Q9ULP0 352 aaKnown RBP17.88■□□□□ 0.45
VSX1-201ENST00000376707 TMEM5Q9Y2B1 443 aa17.88■□□□□ 0.45
VSX1-201ENST00000376707 ZSCAN5BA6NJL1 495 aa17.87■□□□□ 0.45
VSX1-201ENST00000376707 H3BSA7 217 aa17.87■□□□□ 0.45
VSX1-201ENST00000376707 XKRYO14609 159 aa17.87■□□□□ 0.45
VSX1-201ENST00000376707 ICMTO60725 284 aa17.87■□□□□ 0.45
VSX1-201ENST00000376707 NGFP01138 241 aa17.87■□□□□ 0.45
VSX1-201ENST00000376707 ZNF26P17031 533 aaPredicted RBP17.87■□□□□ 0.45
VSX1-201ENST00000376707 GPR4P46093 362 aa17.87■□□□□ 0.45
VSX1-201ENST00000376707 ZBED5Q49AG3 693 aa17.87■□□□□ 0.45
VSX1-201ENST00000376707 ZMAT1Q5H9K5 638 aa17.87■□□□□ 0.45
VSX1-201ENST00000376707 TMEM255AQ5JRV8 349 aa17.87■□□□□ 0.45
VSX1-201ENST00000376707 GLYATQ6IB77 296 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms