RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 ZNF417Q8TAU3 575 aa8.58□□□□□ -1.04
TRIM39-202ENST00000376659 CCDC120Q96HB5 630 aa8.58□□□□□ -1.04
TRIM39-202ENST00000376659 ZNF587Q96SQ5 575 aaPredicted RBP8.58□□□□□ -1.04
TRIM39-202ENST00000376659 ABHD6Q9BV23 337 aa8.58□□□□□ -1.04
TRIM39-202ENST00000376659 MRPL15Q9P015 296 aaKnown RBP8.58□□□□□ -1.04
TRIM39-202ENST00000376659 SCP2D1Q9UJQ7 156 aa8.58□□□□□ -1.04
TRIM39-202ENST00000376659 TSPAN4O14817 238 aa8.58□□□□□ -1.04
TRIM39-202ENST00000376659 ZNF208O43345 1280 aa8.58□□□□□ -1.04
TRIM39-202ENST00000376659 SCO1O75880 301 aa8.58□□□□□ -1.04
TRIM39-202ENST00000376659 KDM4BO94953 1096 aa8.58□□□□□ -1.04
TRIM39-202ENST00000376659 IGLV3-1P01715 115 aa8.58□□□□□ -1.04
TRIM39-202ENST00000376659 ITGB2P05107 769 aa8.58□□□□□ -1.04
TRIM39-202ENST00000376659 PGCP20142 388 aa8.58□□□□□ -1.04
TRIM39-202ENST00000376659 ART1P52961 327 aa8.58□□□□□ -1.04
TRIM39-202ENST00000376659 H2BFSP57053 126 aa8.58□□□□□ -1.04
TRIM39-202ENST00000376659 PUDPQ08623 228 aa8.58□□□□□ -1.04
TRIM39-202ENST00000376659 MAMDC2Q7Z304 686 aaPredicted RBP8.58□□□□□ -1.04
TRIM39-202ENST00000376659 PAQR4Q8N4S7 273 aaPredicted RBP8.58□□□□□ -1.04
TRIM39-202ENST00000376659 ADPRHL1Q8NDY3 354 aa8.58□□□□□ -1.04
TRIM39-202ENST00000376659 ZNF680Q8NEM1 530 aa8.58□□□□□ -1.04
TRIM39-202ENST00000376659 ARL5BQ96KC2 179 aa8.58□□□□□ -1.04
TRIM39-202ENST00000376659 SLC26A1Q9H2B4 701 aa8.58□□□□□ -1.04
TRIM39-202ENST00000376659 UBE2ZQ9H832 354 aaPredicted RBP8.58□□□□□ -1.04
TRIM39-202ENST00000376659 SNRPGP15A8MWD9 76 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 ACOT7O00154 380 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 DHFRP00374 187 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 CD74P04233 296 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 ITPKBP27987 946 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 CSNK1EP49674 416 aaKnown RBP8.57□□□□□ -1.04
TRIM39-202ENST00000376659 SUMO3P55854 103 aaPredicted RBP8.57□□□□□ -1.04
TRIM39-202ENST00000376659 GPR85P60893 370 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 SHEQ5VZ18 495 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 TMEM205Q6UW68 189 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 OR4C16Q8NGL9 310 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 OR1J4Q8NGS1 313 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 C1orf147Q96MC9 270 aaPredicted RBP8.57□□□□□ -1.04
TRIM39-202ENST00000376659 REG4Q9BYZ8 158 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 SH2D2AQ9NP31 389 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 HSPB11Q9Y547 144 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 TMEM14AQ9Y6G1 99 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 WDR87Q6ZQQ6 2873 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 ASXL3Q9C0F0 2248 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 RENP00797 406 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 HRGP04196 525 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 FBXW4P57775 412 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 GUCA2AQ02747 115 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 FMODQ06828 376 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 MELKQ14680 651 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 PLPPR5Q32ZL2 321 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 TMEM69Q5SWH9 247 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 C5orf46Q6UWT4 87 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 ARSKQ6UWY0 536 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 SLC35D2Q76EJ3 337 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 DTX1Q86Y01 620 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 FADS6Q8N9I5 356 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 MFSD8Q8NHS3 518 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 ST8SIA1Q92185 356 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 SEC22CQ9BRL7 303 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 IFT22Q9H7X7 185 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 ELOVL3Q9HB03 270 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 MYOZ1Q9NP98 299 aaPredicted RBP8.57□□□□□ -1.04
TRIM39-202ENST00000376659 MRTO4Q9UKD2 239 aaKnown RBP8.57□□□□□ -1.04
TRIM39-202ENST00000376659 SLC5A6Q9Y289 635 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 R4GMQ9 66 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 SPAG17Q6Q759 2223 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 CNTRLQ7Z7A1 2325 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 A0A1W2PQM1 296 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 LIPT2A6NK58 231 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 ZNF814B7Z6K7 855 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 DUX1O43812 170 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 IL12BP29460 328 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 SSBP1Q04837 148 aaKnown RBP8.57□□□□□ -1.04
TRIM39-202ENST00000376659 NSDHLQ15738 373 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 ZNF813Q6ZN06 617 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 Q6ZSR3 168 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 FAM220AQ7Z4H9 259 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 PLXDC1Q8IUK5 500 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 MISPQ8IVT2 679 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 OR51A2Q8NGJ7 313 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 OR6N1Q8NGY5 312 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 RNF133Q8WVZ7 376 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 FCAMRQ8WWV6 532 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 DAZLQ92904 295 aaKnown RBP8.57□□□□□ -1.04
TRIM39-202ENST00000376659 PTX4Q96A99 478 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 RADILQ96JH8 1075 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 FOXN4Q96NZ1 517 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 SPSB2Q99619 263 aa8.57□□□□□ -1.04
TRIM39-202ENST00000376659 PYCARD-AS1I3L0S3 204 aa8.56□□□□□ -1.04
TRIM39-202ENST00000376659 SHOXO15266 292 aa8.56□□□□□ -1.04
TRIM39-202ENST00000376659 SLC22A5O76082 557 aa8.56□□□□□ -1.04
TRIM39-202ENST00000376659 PLGP00747 810 aaPredicted RBP8.56□□□□□ -1.04
TRIM39-202ENST00000376659 IFNGR1P15260 489 aa8.56□□□□□ -1.04
TRIM39-202ENST00000376659 ZNF17P17021 662 aa8.56□□□□□ -1.04
TRIM39-202ENST00000376659 ANXA7P20073 488 aaKnown RBP8.56□□□□□ -1.04
TRIM39-202ENST00000376659 OR3A3P47888 321 aa8.56□□□□□ -1.04
TRIM39-202ENST00000376659 ARRB1P49407 418 aaPredicted RBP8.56□□□□□ -1.04
TRIM39-202ENST00000376659 LY6G6FQ5SQ64 297 aa8.56□□□□□ -1.04
TRIM39-202ENST00000376659 PEAR1Q5VY43 1037 aaPredicted RBP8.56□□□□□ -1.04
TRIM39-202ENST00000376659 CDH26Q8IXH8 852 aa8.56□□□□□ -1.04
TRIM39-202ENST00000376659 OR8K3Q8NH51 312 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms