RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 VSX1Q9NZR4 365 aaPredicted RBP12.24□□□□□ -0.45
CLCN6-203ENST00000376490 PRPF19Q9UMS4 504 aaKnown RBP12.24□□□□□ -0.45
CLCN6-203ENST00000376490 COA3Q9Y2R0 106 aaPredicted RBP12.24□□□□□ -0.45
CLCN6-203ENST00000376490 LYVE1Q9Y5Y7 322 aa12.24□□□□□ -0.45
CLCN6-203ENST00000376490 ABCA2Q9BZC7 2435 aa12.23□□□□□ -0.45
CLCN6-203ENST00000376490 LOC390937A0A1W2PQ73 354 aa12.23□□□□□ -0.45
CLCN6-203ENST00000376490 C12orf71A8MTZ7 269 aa12.23□□□□□ -0.45
CLCN6-203ENST00000376490 LYNX1G3V0Z9 82 aa12.23□□□□□ -0.45
CLCN6-203ENST00000376490 M0R233 179 aa12.23□□□□□ -0.45
CLCN6-203ENST00000376490 TNFRSF11BO00300 401 aa12.23□□□□□ -0.45
CLCN6-203ENST00000376490 CD5LO43866 347 aa12.23□□□□□ -0.45
CLCN6-203ENST00000376490 KHDRBS3O75525 346 aaKnown RBP12.23□□□□□ -0.45
CLCN6-203ENST00000376490 STAMBPO95630 424 aa12.23□□□□□ -0.45
CLCN6-203ENST00000376490 ERCC1P07992 297 aaPredicted RBP12.23□□□□□ -0.45
CLCN6-203ENST00000376490 LYNX1P0DP58 116 aa12.23□□□□□ -0.45
CLCN6-203ENST00000376490 NAT2P11245 290 aa12.23□□□□□ -0.45
CLCN6-203ENST00000376490 ZNF250P15622 560 aa12.23□□□□□ -0.45
CLCN6-203ENST00000376490 USF1P22415 310 aaPredicted RBP12.23□□□□□ -0.45
CLCN6-203ENST00000376490 FPR3P25089 353 aa12.23□□□□□ -0.45
CLCN6-203ENST00000376490 IFNGR2P38484 337 aa12.23□□□□□ -0.45
CLCN6-203ENST00000376490 WNT5AP41221 380 aa12.23□□□□□ -0.45
CLCN6-203ENST00000376490 NR4A2P43354 598 aa12.23□□□□□ -0.45
CLCN6-203ENST00000376490 MAGEA2P43356 314 aa12.23□□□□□ -0.45
CLCN6-203ENST00000376490 GDI2P50395 445 aaKnown RBP12.23□□□□□ -0.45
CLCN6-203ENST00000376490 PCBD1P61457 104 aa12.23□□□□□ -0.45
CLCN6-203ENST00000376490 PPP2R2BQ00005 443 aa12.23□□□□□ -0.45
CLCN6-203ENST00000376490 DBPQ10586 325 aaPredicted RBP12.23□□□□□ -0.45
CLCN6-203ENST00000376490 TMEM249Q2WGJ8 235 aa12.23□□□□□ -0.45
CLCN6-203ENST00000376490 MTX3Q5HYI7 312 aa12.23□□□□□ -0.45
CLCN6-203ENST00000376490 PGBD2Q6P3X8 592 aa12.23□□□□□ -0.45
CLCN6-203ENST00000376490 TRPM8Q7Z2W7 1104 aa12.23□□□□□ -0.45
CLCN6-203ENST00000376490 ZNF101Q8IZC7 436 aa12.23□□□□□ -0.45
CLCN6-203ENST00000376490 OR1J1Q8NGS3 322 aa12.23□□□□□ -0.45
CLCN6-203ENST00000376490 SYNPRQ8TBG9 265 aa12.23□□□□□ -0.45
CLCN6-203ENST00000376490 FANK1Q8TC84 345 aa12.23□□□□□ -0.45
CLCN6-203ENST00000376490 UBASH3BQ8TF42 649 aa12.23□□□□□ -0.45
CLCN6-203ENST00000376490 C11orf40Q8WZ69 217 aa12.23□□□□□ -0.45
CLCN6-203ENST00000376490 TSSK2Q96PF2 358 aa12.23□□□□□ -0.45
CLCN6-203ENST00000376490 PIMREGQ9BSJ6 248 aa12.23□□□□□ -0.45
CLCN6-203ENST00000376490 THTPAQ9BU02 230 aa12.23□□□□□ -0.45
CLCN6-203ENST00000376490 IFT27Q9BW83 186 aa12.23□□□□□ -0.45
CLCN6-203ENST00000376490 BCL2L14Q9BZR8 327 aa12.23□□□□□ -0.45
CLCN6-203ENST00000376490 MUC13Q9H3R2 512 aa12.23□□□□□ -0.45
CLCN6-203ENST00000376490 MS4A5Q9H3V2 200 aa12.23□□□□□ -0.45
CLCN6-203ENST00000376490 SRA1Q9HD15 236 aaKnown RBP12.23□□□□□ -0.45
CLCN6-203ENST00000376490 MYOZ1Q9NP98 299 aaPredicted RBP12.23□□□□□ -0.45
CLCN6-203ENST00000376490 YAE1D1Q9NRH1 226 aa12.23□□□□□ -0.45
CLCN6-203ENST00000376490 TAAR3PQ9P1P4 343 aa12.23□□□□□ -0.45
CLCN6-203ENST00000376490 SONP18583 2426 aaKnown RBP12.22□□□□□ -0.45
CLCN6-203ENST00000376490 A0A1W2PPW3 197 aa12.22□□□□□ -0.45
CLCN6-203ENST00000376490 NDUFS8O00217 210 aa12.22□□□□□ -0.45
CLCN6-203ENST00000376490 DCTN6O00399 190 aa12.22□□□□□ -0.45
CLCN6-203ENST00000376490 UBOX5O94941 541 aa12.22□□□□□ -0.45
CLCN6-203ENST00000376490 GPANK1O95872 356 aa12.22□□□□□ -0.45
CLCN6-203ENST00000376490 GASTP01350 101 aa12.22□□□□□ -0.45
CLCN6-203ENST00000376490 APEHP13798 732 aaKnown RBP12.22□□□□□ -0.45
CLCN6-203ENST00000376490 SLC6A6P31641 620 aa12.22□□□□□ -0.45
CLCN6-203ENST00000376490 TSPAN31Q12999 210 aa12.22□□□□□ -0.45
CLCN6-203ENST00000376490 GGTLC2Q14390 218 aa12.22□□□□□ -0.45
CLCN6-203ENST00000376490 SYT9Q86SS6 491 aa12.22□□□□□ -0.45
CLCN6-203ENST00000376490 ADCK1Q86TW2 530 aa12.22□□□□□ -0.45
CLCN6-203ENST00000376490 ZNF786Q8N393 782 aa12.22□□□□□ -0.45
CLCN6-203ENST00000376490 OR9Q2Q8NGE9 314 aa12.22□□□□□ -0.45
CLCN6-203ENST00000376490 OR4C15Q8NGM1 316 aa12.22□□□□□ -0.45
CLCN6-203ENST00000376490 OR4K13Q8NH42 304 aa12.22□□□□□ -0.45
CLCN6-203ENST00000376490 CCDC124Q96CT7 223 aaKnown RBP12.22□□□□□ -0.45
CLCN6-203ENST00000376490 NMNAT3Q96T66 252 aa12.22□□□□□ -0.45
CLCN6-203ENST00000376490 BTBD10Q9BSF8 475 aa12.22□□□□□ -0.45
CLCN6-203ENST00000376490 TRIM15Q9C019 465 aa12.22□□□□□ -0.45
CLCN6-203ENST00000376490 MAGIXQ9H6Y5 334 aa12.22□□□□□ -0.45
CLCN6-203ENST00000376490 VNN3Q9NY84 501 aa12.22□□□□□ -0.45
CLCN6-203ENST00000376490 EIF3KQ9UBQ5 218 aaKnown RBP12.22□□□□□ -0.45
CLCN6-203ENST00000376490 IGLV3-9A0A075B6K5 115 aa12.21□□□□□ -0.45
CLCN6-203ENST00000376490 ACOT8O14734 319 aa12.21□□□□□ -0.45
CLCN6-203ENST00000376490 ARPC3O15145 178 aa12.21□□□□□ -0.45
CLCN6-203ENST00000376490 NGFP01138 241 aa12.21□□□□□ -0.45
CLCN6-203ENST00000376490 HPXP02790 462 aa12.21□□□□□ -0.45
CLCN6-203ENST00000376490 HIST1H1CP16403 213 aaKnown RBP12.21□□□□□ -0.45
CLCN6-203ENST00000376490 COL8A2P25067 703 aa12.21□□□□□ -0.45
CLCN6-203ENST00000376490 CENPAP49450 140 aa12.21□□□□□ -0.45
CLCN6-203ENST00000376490 KLF3P57682 345 aaPredicted RBP12.21□□□□□ -0.45
CLCN6-203ENST00000376490 SELENOVP59797 346 aa12.21□□□□□ -0.45
CLCN6-203ENST00000376490 FAM98BQ52LJ0 330 aaKnown RBP12.21□□□□□ -0.45
CLCN6-203ENST00000376490 SPATA46Q5T0L3 261 aa12.21□□□□□ -0.45
CLCN6-203ENST00000376490 ZNF770Q6IQ21 691 aaPredicted RBP12.21□□□□□ -0.45
CLCN6-203ENST00000376490 LEG1Q6P5S2 330 aa12.21□□□□□ -0.45
CLCN6-203ENST00000376490 GLB1L2Q8IW92 636 aa12.21□□□□□ -0.45
CLCN6-203ENST00000376490 OR6V1Q8N148 313 aa12.21□□□□□ -0.45
CLCN6-203ENST00000376490 ASB9Q96DX5 294 aa12.21□□□□□ -0.45
CLCN6-203ENST00000376490 WACQ9BTA9 647 aa12.21□□□□□ -0.45
CLCN6-203ENST00000376490 BPESC1Q9GZL8 116 aa12.21□□□□□ -0.45
CLCN6-203ENST00000376490 EGLN3Q9H6Z9 239 aa12.21□□□□□ -0.45
CLCN6-203ENST00000376490 B9D1Q9UPM9 204 aa12.21□□□□□ -0.45
CLCN6-203ENST00000376490 IGHV4-61A0A0C4DH41 118 aa12.2□□□□□ -0.46
CLCN6-203ENST00000376490 SGCEO43556 437 aa12.2□□□□□ -0.46
CLCN6-203ENST00000376490 TLX2O43763 284 aaPredicted RBP12.2□□□□□ -0.46
CLCN6-203ENST00000376490 CCNB2O95067 398 aa12.2□□□□□ -0.46
CLCN6-203ENST00000376490 GIFP27352 417 aa12.2□□□□□ -0.46
CLCN6-203ENST00000376490 NOS3P29474 1203 aa12.2□□□□□ -0.46
CLCN6-203ENST00000376490 MPV17P39210 176 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms