RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 OR8G3PP0DMU2 310 aa11.67□□□□□ -0.54
MSH5-204ENST00000375755 LIPCP11150 499 aa11.67□□□□□ -0.54
MSH5-204ENST00000375755 NID1P14543 1247 aa11.67□□□□□ -0.54
MSH5-204ENST00000375755 CAPZA1P52907 286 aa11.67□□□□□ -0.54
MSH5-204ENST00000375755 SRSF4Q08170 494 aaKnown RBP11.67□□□□□ -0.54
MSH5-204ENST00000375755 DHRS2Q13268 280 aa11.67□□□□□ -0.54
MSH5-204ENST00000375755 OR7A5Q15622 319 aa11.67□□□□□ -0.54
MSH5-204ENST00000375755 INPP5JQ15735 1006 aaPredicted RBP11.67□□□□□ -0.54
MSH5-204ENST00000375755 DEFB133Q30KQ1 61 aa11.67□□□□□ -0.54
MSH5-204ENST00000375755 NDUFAF7Q7L592 441 aa11.67□□□□□ -0.54
MSH5-204ENST00000375755 SKA3Q8IX90 412 aa11.67□□□□□ -0.54
MSH5-204ENST00000375755 ARL11Q969Q4 196 aa11.67□□□□□ -0.54
MSH5-204ENST00000375755 NMNAT3Q96T66 252 aa11.67□□□□□ -0.54
MSH5-204ENST00000375755 MIOXQ9UGB7 285 aa11.67□□□□□ -0.54
MSH5-204ENST00000375755 FBXL21Q9UKT6 434 aa11.67□□□□□ -0.54
MSH5-204ENST00000375755 ZNF346Q9UL40 294 aaKnown RBP11.67□□□□□ -0.54
MSH5-204ENST00000375755 CPED1A4D0V7 1026 aa11.66□□□□□ -0.54
MSH5-204ENST00000375755 WNT11O96014 354 aa11.66□□□□□ -0.54
MSH5-204ENST00000375755 CD79AP11912 226 aa11.66□□□□□ -0.54
MSH5-204ENST00000375755 BCKDHBP21953 392 aa11.66□□□□□ -0.54
MSH5-204ENST00000375755 CD34P28906 385 aa11.66□□□□□ -0.54
MSH5-204ENST00000375755 PRSS3P35030 304 aa11.66□□□□□ -0.54
MSH5-204ENST00000375755 TRMT12Q53H54 448 aaKnown RBP11.66□□□□□ -0.54
MSH5-204ENST00000375755 VWA2Q5GFL6 755 aa11.66□□□□□ -0.54
MSH5-204ENST00000375755 ATPAF1Q5TC12 328 aaPredicted RBP11.66□□□□□ -0.54
MSH5-204ENST00000375755 MISPQ8IVT2 679 aa11.66□□□□□ -0.54
MSH5-204ENST00000375755 ZNF619Q8N2I2 560 aa11.66□□□□□ -0.54
MSH5-204ENST00000375755 EDAQ92838 391 aa11.66□□□□□ -0.54
MSH5-204ENST00000375755 CPNE2Q96FN4 548 aaPredicted RBP11.66□□□□□ -0.54
MSH5-204ENST00000375755 SEC11CQ9BY50 192 aa11.66□□□□□ -0.54
MSH5-204ENST00000375755 UQCC1Q9NVA1 299 aa11.66□□□□□ -0.54
MSH5-204ENST00000375755 FLRT3Q9NZU0 649 aa11.66□□□□□ -0.54
MSH5-204ENST00000375755 DAPP1Q9UN19 280 aa11.66□□□□□ -0.54
MSH5-204ENST00000375755 GXYLT2A0PJZ3 443 aa11.66□□□□□ -0.54
MSH5-204ENST00000375755 C5orf52A6NGY3 159 aa11.66□□□□□ -0.54
MSH5-204ENST00000375755 RPS4Y1P22090 263 aaKnown RBP11.66□□□□□ -0.54
MSH5-204ENST00000375755 PPM1FP49593 454 aaPredicted RBP11.66□□□□□ -0.54
MSH5-204ENST00000375755 PSMD4P55036 377 aaKnown RBP11.66□□□□□ -0.54
MSH5-204ENST00000375755 RAB5BP61020 215 aa11.66□□□□□ -0.54
MSH5-204ENST00000375755 ZNF684Q5T5D7 378 aa11.66□□□□□ -0.54
MSH5-204ENST00000375755 LIN54Q6MZP7 749 aa11.66□□□□□ -0.54
MSH5-204ENST00000375755 USP53Q70EK8 1073 aa11.66□□□□□ -0.54
MSH5-204ENST00000375755 ZNF227Q86WZ6 799 aa11.66□□□□□ -0.54
MSH5-204ENST00000375755 SAMD14Q8IZD0 417 aaPredicted RBP11.66□□□□□ -0.54
MSH5-204ENST00000375755 GALNT16Q8N428 558 aa11.66□□□□□ -0.54
MSH5-204ENST00000375755 OR5AP2Q8NGF4 316 aa11.66□□□□□ -0.54
MSH5-204ENST00000375755 OR10AC1Q8NH08 325 aa11.66□□□□□ -0.54
MSH5-204ENST00000375755 FBXO17Q96EF6 278 aa11.66□□□□□ -0.54
MSH5-204ENST00000375755 ZNF350Q9GZX5 532 aa11.66□□□□□ -0.54
MSH5-204ENST00000375755 NOP16Q9Y3C1 178 aaKnown RBP11.66□□□□□ -0.54
MSH5-204ENST00000375755 FAM96BQ9Y3D0 163 aa11.66□□□□□ -0.54
MSH5-204ENST00000375755 DBIP07108 87 aaKnown RBP11.66□□□□□ -0.54
MSH5-204ENST00000375755 MELTFP08582 738 aa11.66□□□□□ -0.54
MSH5-204ENST00000375755 SPI1P17947 270 aa11.66□□□□□ -0.54
MSH5-204ENST00000375755 CSNK1EP49674 416 aaKnown RBP11.66□□□□□ -0.54
MSH5-204ENST00000375755 PEA15Q15121 130 aa11.66□□□□□ -0.54
MSH5-204ENST00000375755 DGAT2L6Q6ZPD8 337 aa11.66□□□□□ -0.54
MSH5-204ENST00000375755 METTL27Q8N6F8 245 aaPredicted RBP11.66□□□□□ -0.54
MSH5-204ENST00000375755 ZSCAN1Q8NBB4 408 aa11.66□□□□□ -0.54
MSH5-204ENST00000375755 OR5AK2Q8NH90 309 aa11.66□□□□□ -0.54
MSH5-204ENST00000375755 INTS12Q96CB8 462 aaKnown RBP11.66□□□□□ -0.54
MSH5-204ENST00000375755 PTCHD1Q96NR3 888 aa11.66□□□□□ -0.54
MSH5-204ENST00000375755 NKX3-1Q99801 234 aaPredicted RBP11.66□□□□□ -0.54
MSH5-204ENST00000375755 OR51M1Q9H341 326 aa11.66□□□□□ -0.54
MSH5-204ENST00000375755 FRRS1LQ9P0K9 344 aa11.66□□□□□ -0.54
MSH5-204ENST00000375755 UPB1Q9UBR1 384 aa11.66□□□□□ -0.54
MSH5-204ENST00000375755 DTX4Q9Y2E6 619 aa11.66□□□□□ -0.54
MSH5-204ENST00000375755 A0A0J9YY10 115 aa11.65□□□□□ -0.54
MSH5-204ENST00000375755 A0A1W2PR77 199 aa11.65□□□□□ -0.54
MSH5-204ENST00000375755 FGF17O60258 216 aa11.65□□□□□ -0.54
MSH5-204ENST00000375755 FARS2O95363 451 aaKnown RBP11.65□□□□□ -0.54
MSH5-204ENST00000375755 RAB3DO95716 219 aa11.65□□□□□ -0.54
MSH5-204ENST00000375755 ERV3-1Q14264 604 aa11.65□□□□□ -0.54
MSH5-204ENST00000375755 GXYLT1Q4G148 440 aa11.65□□□□□ -0.54
MSH5-204ENST00000375755 NPEPL1Q8NDH3 523 aa11.65□□□□□ -0.54
MSH5-204ENST00000375755 OR9A4Q8NGU2 314 aa11.65□□□□□ -0.54
MSH5-204ENST00000375755 RERGQ96A58 199 aaPredicted RBP11.65□□□□□ -0.54
MSH5-204ENST00000375755 CCDC74AQ96AQ1 378 aa11.65□□□□□ -0.54
MSH5-204ENST00000375755 SEBOXQ9HB31 216 aaPredicted RBP11.65□□□□□ -0.54
MSH5-204ENST00000375755 TMEM100Q9NV29 134 aa11.65□□□□□ -0.54
MSH5-204ENST00000375755 PLEKHA6Q9Y2H5 1048 aa11.65□□□□□ -0.54
MSH5-204ENST00000375755 RPH3AQ9Y2J0 694 aaPredicted RBP11.65□□□□□ -0.54
MSH5-204ENST00000375755 KLHDC2Q9Y2U9 406 aa11.65□□□□□ -0.54
MSH5-204ENST00000375755 SLC22A7Q9Y694 548 aa11.65□□□□□ -0.54
MSH5-204ENST00000375755 TRBV5-5A0A0J9YX44 114 aa11.65□□□□□ -0.54
MSH5-204ENST00000375755 A0A1B0GWA3 101 aa11.65□□□□□ -0.54
MSH5-204ENST00000375755 ZNF705EA8MWA4 302 aaPredicted RBP11.65□□□□□ -0.54
MSH5-204ENST00000375755 UBE2CO00762 179 aa11.65□□□□□ -0.54
MSH5-204ENST00000375755 ALOX12BO75342 701 aa11.65□□□□□ -0.54
MSH5-204ENST00000375755 RDH16O75452 317 aa11.65□□□□□ -0.54
MSH5-204ENST00000375755 AGR2O95994 175 aa11.65□□□□□ -0.54
MSH5-204ENST00000375755 PTAFRP25105 342 aa11.65□□□□□ -0.54
MSH5-204ENST00000375755 CD38P28907 300 aa11.65□□□□□ -0.54
MSH5-204ENST00000375755 POU3F4P49335 361 aa11.65□□□□□ -0.54
MSH5-204ENST00000375755 RBM39Q14498 530 aaKnown RBP11.65□□□□□ -0.54
MSH5-204ENST00000375755 NAA40Q86UY6 237 aa11.65□□□□□ -0.54
MSH5-204ENST00000375755 CSNK1A1LQ8N752 337 aa11.65□□□□□ -0.54
MSH5-204ENST00000375755 GPX8Q8TED1 209 aa11.65□□□□□ -0.54
MSH5-204ENST00000375755 MAP3K3Q99759 626 aa11.65□□□□□ -0.54
MSH5-204ENST00000375755 RNF122Q9H9V4 155 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms