RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 FAM174AQ8TBP5 190 aa10.52□□□□□ -0.72
PTCH1-203ENST00000375274 PIGTQ969N2 578 aa10.52□□□□□ -0.72
PTCH1-203ENST00000375274 GAREM1Q9H706 876 aa10.52□□□□□ -0.72
PTCH1-203ENST00000375274 PRDM7Q9NQW5 492 aa10.52□□□□□ -0.72
PTCH1-203ENST00000375274 NSG1A0A0A6YYJ2 146 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 ZNF705FA8MVS1 300 aaPredicted RBP10.52□□□□□ -0.73
PTCH1-203ENST00000375274 HBE1P02100 147 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 CEACAM5P06731 702 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 ZNF705DP0CH99 300 aaPredicted RBP10.52□□□□□ -0.73
PTCH1-203ENST00000375274 ZNF705BP0CI00 300 aaPredicted RBP10.52□□□□□ -0.73
PTCH1-203ENST00000375274 ALOX5APP20292 161 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 GALP22466 123 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 PPICP45877 212 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 CSNK1EP49674 416 aaKnown RBP10.52□□□□□ -0.73
PTCH1-203ENST00000375274 P2RX1P51575 399 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 MRPS34P82930 218 aaKnown RBP10.52□□□□□ -0.73
PTCH1-203ENST00000375274 EGR3Q06889 387 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 ZNF266Q14584 549 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 CLLU1Q5K131 121 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 HIST2H3PS2Q5TEC6 136 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 FJX1Q86VR8 437 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 WDR5BQ86VZ2 330 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 WDR89Q96FK6 387 aaPredicted RBP10.52□□□□□ -0.73
PTCH1-203ENST00000375274 TMEM68Q96MH6 324 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 OR51B6Q9H340 312 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 POMT2Q9UKY4 750 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 SIGLEC7Q9Y286 467 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 B3GALT5Q9Y2C3 310 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 HS3ST3A1Q9Y663 406 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 MCM3APO60318 1980 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 CABIN1Q9Y6J0 2220 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 CEP290O15078 2479 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 TUBAL3A6NHL2 446 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 CD160O95971 181 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 SRPXP78539 464 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 GPNMBQ14956 572 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 AANATQ16613 207 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 ZNF684Q5T5D7 378 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 ZNF793Q6ZN11 406 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 AAED1Q7RTV5 226 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 ST6GAL2Q96JF0 529 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 SIGLEC11Q96RL6 698 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 OR11A1Q9GZK7 315 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 TAF9BQ9HBM6 251 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 CHRNA9Q9UGM1 479 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 ING1Q9UK53 422 aaPredicted RBP10.52□□□□□ -0.73
PTCH1-203ENST00000375274 TIMM8BQ9Y5J9 83 aaPredicted RBP10.52□□□□□ -0.73
PTCH1-203ENST00000375274 ZFC3H1O60293 1989 aaKnown RBP10.52□□□□□ -0.73
PTCH1-203ENST00000375274 ZNF705GA8MUZ8 300 aaPredicted RBP10.52□□□□□ -0.73
PTCH1-203ENST00000375274 MCRIP1C9JLW8 97 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 PHF1O43189 567 aaPredicted RBP10.52□□□□□ -0.73
PTCH1-203ENST00000375274 RGS11O94810 467 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 AKR7A3O95154 331 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 DPP4P27487 766 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 MSX1P28360 303 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 METAP1P53582 386 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 TMPRSS11FQ6ZWK6 438 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 TEX19Q8NA77 164 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 FAM71CQ8NEG0 241 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 PPP1R35Q8TAP8 253 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 CPT1CQ8TCG5 803 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 NUDCD2Q8WVJ2 157 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 CPNE4Q96A23 557 aaPredicted RBP10.52□□□□□ -0.73
PTCH1-203ENST00000375274 ERVMER34-1Q9H9K5 563 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 EXOSC3Q9NQT5 275 aaKnown RBP10.52□□□□□ -0.73
PTCH1-203ENST00000375274 KCNG2Q9UJ96 466 aa10.52□□□□□ -0.73
PTCH1-203ENST00000375274 RAB19A4D1S5 217 aa10.51□□□□□ -0.73
PTCH1-203ENST00000375274 TMEM127O75204 238 aa10.51□□□□□ -0.73
PTCH1-203ENST00000375274 ITGBL1O95965 494 aaPredicted RBP10.51□□□□□ -0.73
PTCH1-203ENST00000375274 MT-CO2P00403 227 aa10.51□□□□□ -0.73
PTCH1-203ENST00000375274 GDF1P27539 372 aa10.51□□□□□ -0.73
PTCH1-203ENST00000375274 SERPINF1P36955 418 aa10.51□□□□□ -0.73
PTCH1-203ENST00000375274 ERVK-16P61578 105 aa10.51□□□□□ -0.73
PTCH1-203ENST00000375274 CD300LDQ6UXZ3 194 aa10.51□□□□□ -0.73
PTCH1-203ENST00000375274 LGI3Q8N145 548 aa10.51□□□□□ -0.73
PTCH1-203ENST00000375274 GJC3Q8NFK1 279 aa10.51□□□□□ -0.73
PTCH1-203ENST00000375274 NAT6Q93015 286 aa10.51□□□□□ -0.73
PTCH1-203ENST00000375274 SDSLQ96GA7 329 aa10.51□□□□□ -0.73
PTCH1-203ENST00000375274 ACAD8Q9UKU7 415 aa10.51□□□□□ -0.73
PTCH1-203ENST00000375274 NEU3Q9UQ49 428 aa10.51□□□□□ -0.73
PTCH1-203ENST00000375274 DNAJC13O75165 2243 aa10.51□□□□□ -0.73
PTCH1-203ENST00000375274 THSD7AQ9UPZ6 1657 aa10.51□□□□□ -0.73
PTCH1-203ENST00000375274 LAMTOR5O43504 91 aa10.51□□□□□ -0.73
PTCH1-203ENST00000375274 PLPP2O43688 288 aa10.51□□□□□ -0.73
PTCH1-203ENST00000375274 CXCL10P02778 98 aa10.51□□□□□ -0.73
PTCH1-203ENST00000375274 ECI1P42126 302 aa10.51□□□□□ -0.73
PTCH1-203ENST00000375274 BTG2P78543 158 aa10.51□□□□□ -0.73
PTCH1-203ENST00000375274 SIGIRRQ6IA17 410 aa10.51□□□□□ -0.73
PTCH1-203ENST00000375274 OR52B4Q8NGK2 314 aa10.51□□□□□ -0.73
PTCH1-203ENST00000375274 NIPSNAP3BQ9BS92 247 aa10.51□□□□□ -0.73
PTCH1-203ENST00000375274 JAM3Q9BX67 310 aa10.51□□□□□ -0.73
PTCH1-203ENST00000375274 PURGQ9UJV8 347 aaKnown RBP10.51□□□□□ -0.73
PTCH1-203ENST00000375274 TMEM184BQ9Y519 407 aaPredicted RBP10.51□□□□□ -0.73
PTCH1-203ENST00000375274 PCDHGA5Q9Y5G8 931 aa10.51□□□□□ -0.73
PTCH1-203ENST00000375274 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.51□□□□□ -0.73
PTCH1-203ENST00000375274 A0A1W2PPV4 95 aa10.51□□□□□ -0.73
PTCH1-203ENST00000375274 HSPB2A8KAH6 182 aa10.51□□□□□ -0.73
PTCH1-203ENST00000375274 ZNF749O43361 778 aa10.51□□□□□ -0.73
PTCH1-203ENST00000375274 MRPL33O75394 65 aaKnown RBP10.51□□□□□ -0.73
PTCH1-203ENST00000375274 CBR1P16152 277 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms