RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 MBOAT4Q96T53 435 aa6.09□□□□□ -1.44
UBR4-204ENST00000375254 MRPL13Q9BYD1 178 aaKnown RBP6.09□□□□□ -1.44
UBR4-204ENST00000375254 ACER3Q9NUN7 267 aa6.09□□□□□ -1.44
UBR4-204ENST00000375254 EMCNQ9ULC0 261 aa6.09□□□□□ -1.44
UBR4-204ENST00000375254 RHBDD3Q9Y3P4 386 aa6.09□□□□□ -1.44
UBR4-204ENST00000375254 USP31Q70CQ4 1352 aa6.09□□□□□ -1.44
UBR4-204ENST00000375254 MICBQ29980 383 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 PPTC7Q8NI37 304 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 KCNK15Q9H427 330 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 C19orf67A6NJJ6 358 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 GRIN3BO60391 1043 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 RHBDL1O75783 438 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 CDKN2DP55273 166 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 PMVKQ15126 192 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 NEO1Q92859 1461 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 A0A0B4J293 547 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 ACTL6AO96019 429 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 GPR4P46093 362 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 CTBSQ01459 385 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 SLCO4A1Q96BD0 722 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 NIPSNAP1Q9BPW8 284 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 TRMT61BQ9BVS5 477 aaKnown RBP6.08□□□□□ -1.44
UBR4-204ENST00000375254 TMEM59Q9BXS4 323 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 HES4Q9HCC6 221 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 SSUH2Q9Y2M2 353 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 ERVK-7P63135 1459 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.08□□□□□ -1.44
UBR4-204ENST00000375254 ZNF737O75373 536 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 OTOP2Q7RTS6 562 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 PSMG3Q9BT73 122 aaPredicted RBP6.08□□□□□ -1.44
UBR4-204ENST00000375254 ITGB1BP1O14713 200 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 MT-ND6P03923 174 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 MPGP29372 298 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 C21orf58P58505 322 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 ST3GAL2Q16842 350 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 BPIFA4PQ86YQ2 179 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 OR51A2Q8NGJ7 313 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 CHST6Q9GZX3 395 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 SMIM28A0A1B0GU29 152 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 TISP43B9A030 160 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 TAF10Q12962 218 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 PRAMEF20Q5VT98 475 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 FAM131CQ96AQ9 280 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 PRRX2Q99811 253 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 PECRQ9BY49 303 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 SOX10P56693 466 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 PDE7AQ13946 482 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 HMGCLL1Q8TB92 370 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 MRGPRX4Q96LA9 322 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 NPY6RQ99463 290 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 HMGXB3Q12766 1538 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 PLXNC1O60486 1568 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 HMGA2P52926 109 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 PNLIPRP2P54317 469 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 RAB6CQ53S08 254 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 TMEM182Q6ZP80 229 aaPredicted RBP6.08□□□□□ -1.44
UBR4-204ENST00000375254 P4HTMQ9NXG6 502 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 DNMBPQ6XZF7 1577 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 IFITM10A6NMD0 228 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 GSTP1P09211 210 aaKnown RBP6.08□□□□□ -1.44
UBR4-204ENST00000375254 ATF1P18846 271 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 RAB37Q96AX2 223 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 ALKBH7Q9BT30 221 aaPredicted RBP6.08□□□□□ -1.44
UBR4-204ENST00000375254 VDAC3Q9Y277 283 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 HECW1Q76N89 1606 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 EMP1P54849 157 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 TGFBR3Q03167 851 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 SPNS3Q6ZMD2 512 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 OR1A2Q9Y585 309 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 NPHP4O75161 1426 aaPredicted RBP6.08□□□□□ -1.44
UBR4-204ENST00000375254 GAPDHP04406 335 aaKnown RBP6.08□□□□□ -1.44
UBR4-204ENST00000375254 HSPB1P04792 205 aaKnown RBP6.08□□□□□ -1.44
UBR4-204ENST00000375254 BCL3P20749 454 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 CRYBB2P43320 205 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 PRSS3P2Q8NHM4 247 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 ACER1Q8TDN7 264 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 ATG4CQ96DT6 458 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 FAM173AQ9BQD7 235 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 TMEM231Q9H6L2 316 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 FAM221AA4D161 298 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 DIRC3C9JPN6 131 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 PEX10O60683 326 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 SYNGR4O95473 234 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 SQSTM1Q13501 440 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 NKX1-1Q15270 411 aaPredicted RBP6.08□□□□□ -1.44
UBR4-204ENST00000375254 ARSIQ5FYB1 569 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 ADGRE4PQ86SQ3 457 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 OPN4Q9UHM6 478 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 CLDN5O00501 218 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 HPP00738 406 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 RPS15AP62244 130 aaKnown RBP6.08□□□□□ -1.44
UBR4-204ENST00000375254 RING1Q06587 406 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 IL13RA2Q14627 380 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 TMPRSS9Q7Z410 1059 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 DAZLQ92904 295 aaKnown RBP6.08□□□□□ -1.44
UBR4-204ENST00000375254 ZMYND19Q96E35 227 aaPredicted RBP6.08□□□□□ -1.44
UBR4-204ENST00000375254 MS4A4EQ96PG1 132 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 OR52D1Q9H346 318 aa6.08□□□□□ -1.44
UBR4-204ENST00000375254 ZNF805Q5CZA5 627 aa6.07□□□□□ -1.44
UBR4-204ENST00000375254 PHOSPHO1Q8TCT1 267 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms