RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 COPZ2Q9P299 210 aa13.91□□□□□ -0.18
CCDC40-202ENST00000374876 TRBV5-5A0A0J9YX44 114 aa13.91□□□□□ -0.18
CCDC40-202ENST00000374876 A0A1B0GTH9 108 aa13.91□□□□□ -0.18
CCDC40-202ENST00000374876 TMEM212A6NML5 194 aa13.91□□□□□ -0.18
CCDC40-202ENST00000374876 NPIPB7O75200 414 aa13.91□□□□□ -0.18
CCDC40-202ENST00000374876 AHSA1O95433 338 aa13.91□□□□□ -0.18
CCDC40-202ENST00000374876 C1QBP02746 253 aa13.91□□□□□ -0.18
CCDC40-202ENST00000374876 TCRBP04435 133 aa13.91□□□□□ -0.18
CCDC40-202ENST00000374876 DPP4P27487 766 aa13.91□□□□□ -0.18
CCDC40-202ENST00000374876 CLDN12P56749 244 aa13.91□□□□□ -0.18
CCDC40-202ENST00000374876 RASGEF1BQ0VAM2 473 aa13.91□□□□□ -0.18
CCDC40-202ENST00000374876 FAPQ12884 760 aa13.91□□□□□ -0.18
CCDC40-202ENST00000374876 SNTB2Q13425 540 aaKnown RBP13.91□□□□□ -0.18
CCDC40-202ENST00000374876 EFR3AQ14156 821 aa13.91□□□□□ -0.18
CCDC40-202ENST00000374876 SLC22A10Q63ZE4 541 aa13.91□□□□□ -0.18
CCDC40-202ENST00000374876 MTFR2Q6P444 385 aa13.91□□□□□ -0.18
CCDC40-202ENST00000374876 NFAM1Q8NET5 270 aaPredicted RBP13.91□□□□□ -0.18
CCDC40-202ENST00000374876 OTOSQ8NHW6 89 aa13.91□□□□□ -0.18
CCDC40-202ENST00000374876 CACNG6Q9BXT2 260 aa13.91□□□□□ -0.18
CCDC40-202ENST00000374876 NIPAL2Q9H841 368 aa13.91□□□□□ -0.18
CCDC40-202ENST00000374876 ZNF71Q9NQZ8 489 aaPredicted RBP13.91□□□□□ -0.18
CCDC40-202ENST00000374876 KCNG2Q9UJ96 466 aa13.91□□□□□ -0.18
CCDC40-202ENST00000374876 ING1Q9UK53 422 aaPredicted RBP13.91□□□□□ -0.18
CCDC40-202ENST00000374876 B9D1Q9UPM9 204 aa13.91□□□□□ -0.18
CCDC40-202ENST00000374876 FKBP7Q9Y680 259 aa13.91□□□□□ -0.18
CCDC40-202ENST00000374876 OR4C45A6NMZ5 311 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 HSPB2A8KAH6 182 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 FAM47E-STBD1D6RA91 191 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 SERPINA7P05543 415 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 CALCBP10092 127 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 HSPB2Q16082 182 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 CCDC92Q53HC0 331 aaPredicted RBP13.9□□□□□ -0.18
CCDC40-202ENST00000374876 LIX1LQ8IVB5 337 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 MISPQ8IVT2 679 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 ZNF519Q8TB69 540 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 STK35Q8TDR2 534 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 RELTQ969Z4 430 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 SLC25A38Q96DW6 304 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 S100A16Q96FQ6 103 aaKnown RBP13.9□□□□□ -0.18
CCDC40-202ENST00000374876 OR11A1Q9GZK7 315 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 MED28Q9H204 178 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 TXNIPQ9H3M7 391 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 ZNF552Q9H707 407 aaPredicted RBP13.9□□□□□ -0.18
CCDC40-202ENST00000374876 AUNIPQ9H7T9 357 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 SLCO1C1Q9NYB5 712 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 TNRC6AQ8NDV7 1962 aaKnown RBP13.9□□□□□ -0.18
CCDC40-202ENST00000374876 ZFYVE26Q68DK2 2539 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 MKRN2OSH3BPM6 223 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 ZNF593O00488 134 aaPredicted RBP13.9□□□□□ -0.18
CCDC40-202ENST00000374876 OR2T1O43869 369 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 SLC16A7O60669 478 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 ZNF254O75437 659 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 CEACAM4O75871 244 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 MT-ND4P03905 459 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 PDGFAP04085 211 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 ICAM2P13598 275 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 S100A1P23297 94 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 GDNFP39905 211 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 GZMKP49863 264 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 BLVRAP53004 296 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 SOX8P57073 446 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 DYRK1AQ13627 763 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 KLF9Q13886 244 aaPredicted RBP13.9□□□□□ -0.18
CCDC40-202ENST00000374876 ODF4Q2M2E3 257 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 B3GNTL1Q67FW5 361 aaPredicted RBP13.9□□□□□ -0.18
CCDC40-202ENST00000374876 OR5M10Q6IEU7 315 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 C5orf46Q6UWT4 87 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 LRRN1Q6UXK5 716 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 C16orf47Q6ZP98 133 aaPredicted RBP13.9□□□□□ -0.18
CCDC40-202ENST00000374876 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.9□□□□□ -0.18
CCDC40-202ENST00000374876 SERPINA12Q8IW75 414 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 M1APQ8TC57 530 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 GPR148Q8TDV2 347 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 THAP3Q8WTV1 239 aaPredicted RBP13.9□□□□□ -0.18
CCDC40-202ENST00000374876 ASB17Q8WXJ9 295 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 TMEM234Q8WY98 164 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 PSMF1Q92530 271 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 FOXN4Q96NZ1 517 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 SLA2Q9H6Q3 261 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 OR5V1Q9UGF6 321 aa13.9□□□□□ -0.18
CCDC40-202ENST00000374876 BOD1L1Q8NFC6 3051 aa13.89□□□□□ -0.19
CCDC40-202ENST00000374876 ANXA2P2A6NMY6 339 aa13.89□□□□□ -0.19
CCDC40-202ENST00000374876 PLPP3O14495 311 aa13.89□□□□□ -0.19
CCDC40-202ENST00000374876 RAF1P04049 648 aa13.89□□□□□ -0.19
CCDC40-202ENST00000374876 ANXA2P07355 339 aaKnown RBP13.89□□□□□ -0.19
CCDC40-202ENST00000374876 CCR6P51684 374 aa13.89□□□□□ -0.19
CCDC40-202ENST00000374876 EXT1Q16394 746 aa13.89□□□□□ -0.19
CCDC40-202ENST00000374876 PRSS35Q8N3Z0 413 aa13.89□□□□□ -0.19
CCDC40-202ENST00000374876 APCDD1LQ8NCL9 501 aa13.89□□□□□ -0.19
CCDC40-202ENST00000374876 ZNF417Q8TAU3 575 aa13.89□□□□□ -0.19
CCDC40-202ENST00000374876 SYNPRQ8TBG9 265 aa13.89□□□□□ -0.19
CCDC40-202ENST00000374876 ZFAND1Q8TCF1 268 aa13.89□□□□□ -0.19
CCDC40-202ENST00000374876 RAB40AQ8WXH6 277 aa13.89□□□□□ -0.19
CCDC40-202ENST00000374876 TMEM106AQ96A25 262 aa13.89□□□□□ -0.19
CCDC40-202ENST00000374876 SCMH1Q96GD3 660 aa13.89□□□□□ -0.19
CCDC40-202ENST00000374876 BBC3Q96PG8 261 aaPredicted RBP13.89□□□□□ -0.19
CCDC40-202ENST00000374876 ZNF587Q96SQ5 575 aaPredicted RBP13.89□□□□□ -0.19
CCDC40-202ENST00000374876 AMELYQ99218 206 aa13.89□□□□□ -0.19
CCDC40-202ENST00000374876 SEMA4CQ9C0C4 833 aa13.89□□□□□ -0.19
CCDC40-202ENST00000374876 VSX1Q9NZR4 365 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms