RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 CDK10Q15131 360 aa10.83□□□□□ -0.68
HMGCL-202ENST00000374487 OR7E24Q6IFN5 339 aa10.83□□□□□ -0.68
HMGCL-202ENST00000374487 FDX2Q6P4F2 183 aa10.83□□□□□ -0.68
HMGCL-202ENST00000374487 ZNF227Q86WZ6 799 aa10.83□□□□□ -0.68
HMGCL-202ENST00000374487 DND1Q8IYX4 353 aaKnown RBP10.83□□□□□ -0.68
HMGCL-202ENST00000374487 ZNF454Q8N9F8 522 aa10.83□□□□□ -0.68
HMGCL-202ENST00000374487 KDF1Q8NAX2 398 aaPredicted RBP10.83□□□□□ -0.68
HMGCL-202ENST00000374487 FCAMRQ8WWV6 532 aa10.83□□□□□ -0.68
HMGCL-202ENST00000374487 CMKLR1Q99788 373 aa10.83□□□□□ -0.68
HMGCL-202ENST00000374487 STRADBQ9C0K7 418 aa10.83□□□□□ -0.68
HMGCL-202ENST00000374487 SLC26A1Q9H2B4 701 aa10.83□□□□□ -0.68
HMGCL-202ENST00000374487 CHST11Q9NPF2 352 aa10.83□□□□□ -0.68
HMGCL-202ENST00000374487 SERINC1Q9NRX5 453 aa10.83□□□□□ -0.68
HMGCL-202ENST00000374487 GPN3Q9UHW5 284 aaPredicted RBP10.83□□□□□ -0.68
HMGCL-202ENST00000374487 B3GALT1Q9Y5Z6 326 aa10.83□□□□□ -0.68
HMGCL-202ENST00000374487 ETV7Q9Y603 341 aa10.83□□□□□ -0.68
HMGCL-202ENST00000374487 APC2O95996 2303 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 LOC400499M0QZD8 3231 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 TRBV5-7A0A0A0MS05 114 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 TEX51A0A1B0GUA7 166 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 SHISA8B8ZZ34 492 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 GABARAPH6UMI1 98 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 RAD1O60671 282 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 TCEA1P23193 301 aaKnown RBP10.82□□□□□ -0.68
HMGCL-202ENST00000374487 CCR6P51684 374 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 MAP2K6P52564 334 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 AP3S2P59780 193 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 HSF1Q00613 529 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 MAB21L1Q13394 359 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 DYRK1AQ13627 763 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 IL11RAQ14626 422 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 TEX30Q5JUR7 227 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 TMEM205Q6UW68 189 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 BPHLQ86WA6 291 aaPredicted RBP10.82□□□□□ -0.68
HMGCL-202ENST00000374487 BMPERQ8N8U9 685 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 ASB10Q8WXI3 467 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 MCHR2Q969V1 340 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 MIB2Q96AX9 1013 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 MRGPRX4Q96LA9 322 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 MED28Q9H204 178 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 AKIRIN1Q9H9L7 192 aaPredicted RBP10.82□□□□□ -0.68
HMGCL-202ENST00000374487 KLHL9Q9P2J3 617 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 SLC22A13Q9Y226 551 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 BOLA1Q9Y3E2 137 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 USP24Q9UPU5 2620 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 CDRT15L2A8MXV6 281 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 SULT1B1O43704 296 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 ECDO95905 644 aaPredicted RBP10.82□□□□□ -0.68
HMGCL-202ENST00000374487 PNPP00491 289 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 KLK3P07288 261 aaPredicted RBP10.82□□□□□ -0.68
HMGCL-202ENST00000374487 FMODQ06828 376 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 KLF9Q13886 244 aaPredicted RBP10.82□□□□□ -0.68
HMGCL-202ENST00000374487 BTBD16Q32M84 506 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 TMEM53Q6P2H8 277 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 OR52N5Q8NH56 324 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 C15orf40Q8WUR7 153 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 GCDHQ92947 438 aaPredicted RBP10.82□□□□□ -0.68
HMGCL-202ENST00000374487 DACT3Q96B18 629 aaPredicted RBP10.82□□□□□ -0.68
HMGCL-202ENST00000374487 HAVCR1Q96D42 359 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 RNF170Q96K19 258 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 TMEM246Q9BRR3 403 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 MED29Q9NX70 200 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 MRPL15Q9P015 296 aaKnown RBP10.82□□□□□ -0.68
HMGCL-202ENST00000374487 STEAP1Q9UHE8 339 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 RALYQ9UKM9 306 aaKnown RBP10.82□□□□□ -0.68
HMGCL-202ENST00000374487 FOXJ3Q9UPW0 622 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 DHDHQ9UQ10 334 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 B3GALT5Q9Y2C3 310 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 WIF1Q9Y5W5 379 aa10.82□□□□□ -0.68
HMGCL-202ENST00000374487 PCNX3Q9H6A9 2034 aa10.81□□□□□ -0.68
HMGCL-202ENST00000374487 LIPT2A6NK58 231 aa10.81□□□□□ -0.68
HMGCL-202ENST00000374487 RGS13O14921 159 aa10.81□□□□□ -0.68
HMGCL-202ENST00000374487 KHDRBS3O75525 346 aaKnown RBP10.81□□□□□ -0.68
HMGCL-202ENST00000374487 KRT33AO76009 404 aa10.81□□□□□ -0.68
HMGCL-202ENST00000374487 FGF5P12034 268 aa10.81□□□□□ -0.68
HMGCL-202ENST00000374487 ZNF28P17035 718 aa10.81□□□□□ -0.68
HMGCL-202ENST00000374487 CDK2P24941 298 aa10.81□□□□□ -0.68
HMGCL-202ENST00000374487 ERP29P30040 261 aaKnown RBP10.81□□□□□ -0.68
HMGCL-202ENST00000374487 NDUFA5Q16718 116 aa10.81□□□□□ -0.68
HMGCL-202ENST00000374487 FAM205BPQ63HN1 556 aa10.81□□□□□ -0.68
HMGCL-202ENST00000374487 MRPL14Q6P1L8 145 aaKnown RBP10.81□□□□□ -0.68
HMGCL-202ENST00000374487 NDUFAF7Q7L592 441 aa10.81□□□□□ -0.68
HMGCL-202ENST00000374487 SLC7A5P1Q8MH63 180 aa10.81□□□□□ -0.68
HMGCL-202ENST00000374487 ASCC1Q8N9N2 400 aaKnown RBP10.81□□□□□ -0.68
HMGCL-202ENST00000374487 AGBL5Q8NDL9 886 aa10.81□□□□□ -0.68
HMGCL-202ENST00000374487 OR52I2Q8NH67 350 aa10.81□□□□□ -0.68
HMGCL-202ENST00000374487 PPP1R14AQ96A00 147 aa10.81□□□□□ -0.68
HMGCL-202ENST00000374487 PHF21AQ96BD5 680 aa10.81□□□□□ -0.68
HMGCL-202ENST00000374487 POTEKPQ9BYX7 375 aa10.81□□□□□ -0.68
HMGCL-202ENST00000374487 ALKBH4Q9NXW9 302 aa10.81□□□□□ -0.68
HMGCL-202ENST00000374487 SLC39A1Q9NY26 324 aa10.81□□□□□ -0.68
HMGCL-202ENST00000374487 CKLFQ9UBR5 152 aa10.81□□□□□ -0.68
HMGCL-202ENST00000374487 RCE1Q9Y256 329 aa10.81□□□□□ -0.68
HMGCL-202ENST00000374487 LRP12Q9Y561 859 aa10.81□□□□□ -0.68
HMGCL-202ENST00000374487 DSPP15924 2871 aaKnown RBP10.81□□□□□ -0.68
HMGCL-202ENST00000374487 FAM47E-STBD1D6RA91 191 aa10.8□□□□□ -0.68
HMGCL-202ENST00000374487 H0YC42 278 aa10.8□□□□□ -0.68
HMGCL-202ENST00000374487 CD2P06729 351 aa10.8□□□□□ -0.68
HMGCL-202ENST00000374487 FBXO45P0C2W1 286 aa10.8□□□□□ -0.68
HMGCL-202ENST00000374487 H2AFB2P0C5Z0 115 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms