RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 FBXW4P57775 412 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 HBMQ6B0K9 141 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 ATG4DQ86TL0 474 aaPredicted RBP12.81□□□□□ -0.36
HMGA1-203ENST00000374116 ZNF227Q86WZ6 799 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 EIF4E3Q8N5X7 224 aaKnown RBP12.81□□□□□ -0.36
HMGA1-203ENST00000374116 TEX19Q8NA77 164 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 PHOSPHO1Q8TCT1 267 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 SLC39A7Q92504 469 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 ZMYND19Q96E35 227 aaPredicted RBP12.81□□□□□ -0.36
HMGA1-203ENST00000374116 MRPL48Q96GC5 212 aaKnown RBP12.81□□□□□ -0.36
HMGA1-203ENST00000374116 BBC3Q96PG8 261 aaPredicted RBP12.81□□□□□ -0.36
HMGA1-203ENST00000374116 DDOQ99489 341 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 PCDHB16Q9NRJ7 776 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 COPZ2Q9P299 210 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 ARPC4-TTLL3A0A0A6YYG9 625 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 SLC22A23A1A5C7 686 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 LRRN3E7EW58 273 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 SC5DO75845 299 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 SERPINA3P01011 423 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 MST1P26927 711 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 PYCR1P32322 319 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 SLC3A1Q07837 685 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 OR1C1Q15619 314 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 TUSC1Q2TAM9 212 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 BCL2L15Q5TBC7 163 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 ZNF57Q68EA5 555 aaPredicted RBP12.81□□□□□ -0.36
HMGA1-203ENST00000374116 CBLN3Q6UW01 205 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 CEACAM19Q7Z692 300 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 PXKQ7Z7A4 578 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 SLC35F2Q8IXU6 374 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 RBMXL3Q8N7X1 1067 aaKnown RBP12.81□□□□□ -0.36
HMGA1-203ENST00000374116 GATSQ8NAP1 163 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 NPEPL1Q8NDH3 523 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 C17orf47Q8NEP4 570 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 ZNF524Q96C55 264 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 PGLYRP3Q96LB9 341 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 USB1Q9BQ65 265 aaKnown RBP12.81□□□□□ -0.36
HMGA1-203ENST00000374116 NMNAT2Q9BZQ4 307 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 LRFN1Q9P244 771 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 ZNF222Q9UK12 451 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 SLC6A5Q9Y345 797 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 ADAM18Q9Y3Q7 739 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 NPFFR2Q9Y5X5 522 aa12.81□□□□□ -0.36
HMGA1-203ENST00000374116 TLN1Q9Y490 2541 aaKnown RBP12.81□□□□□ -0.36
HMGA1-203ENST00000374116 PRRC2CQ9Y520 2896 aaKnown RBP12.8□□□□□ -0.36
HMGA1-203ENST00000374116 OR6C65A6NJZ3 312 aa12.8□□□□□ -0.36
HMGA1-203ENST00000374116 M0R233 179 aa12.8□□□□□ -0.36
HMGA1-203ENST00000374116 DVL2O14641 736 aa12.8□□□□□ -0.36
HMGA1-203ENST00000374116 OGG1O15527 345 aa12.8□□□□□ -0.36
HMGA1-203ENST00000374116 CFDP00746 253 aaPredicted RBP12.8□□□□□ -0.36
HMGA1-203ENST00000374116 TFP02787 698 aa12.8□□□□□ -0.36
HMGA1-203ENST00000374116 CD1AP06126 327 aa12.8□□□□□ -0.36
HMGA1-203ENST00000374116 DNASE1P24855 282 aa12.8□□□□□ -0.36
HMGA1-203ENST00000374116 SHC1P29353 583 aa12.8□□□□□ -0.36
HMGA1-203ENST00000374116 CALCRP30988 508 aa12.8□□□□□ -0.36
HMGA1-203ENST00000374116 SLC6A8P48029 635 aa12.8□□□□□ -0.36
HMGA1-203ENST00000374116 CYB561P49447 251 aa12.8□□□□□ -0.36
HMGA1-203ENST00000374116 GPR85P60893 370 aa12.8□□□□□ -0.36
HMGA1-203ENST00000374116 PLCXD2Q0VAA5 305 aa12.8□□□□□ -0.36
HMGA1-203ENST00000374116 SCRN3Q0VDG4 424 aa12.8□□□□□ -0.36
HMGA1-203ENST00000374116 ZNF169Q14929 603 aaPredicted RBP12.8□□□□□ -0.36
HMGA1-203ENST00000374116 IDNKQ5T6J7 187 aa12.8□□□□□ -0.36
HMGA1-203ENST00000374116 RGS7BPQ6MZT1 257 aaPredicted RBP12.8□□□□□ -0.36
HMGA1-203ENST00000374116 SEZ6L2Q6UXD5 910 aa12.8□□□□□ -0.36
HMGA1-203ENST00000374116 SSX6Q7RTT6 188 aa12.8□□□□□ -0.36
HMGA1-203ENST00000374116 NUP54Q7Z3B4 507 aa12.8□□□□□ -0.36
HMGA1-203ENST00000374116 HSD17B13Q7Z5P4 300 aaPredicted RBP12.8□□□□□ -0.36
HMGA1-203ENST00000374116 ARMC10Q8N2F6 343 aa12.8□□□□□ -0.36
HMGA1-203ENST00000374116 CLRN3Q8NCR9 226 aa12.8□□□□□ -0.36
HMGA1-203ENST00000374116 OR10G3Q8NGC4 313 aa12.8□□□□□ -0.36
HMGA1-203ENST00000374116 OR5J2Q8NH18 312 aa12.8□□□□□ -0.36
HMGA1-203ENST00000374116 DACT3Q96B18 629 aaPredicted RBP12.8□□□□□ -0.36
HMGA1-203ENST00000374116 ADOQ96SZ5 270 aa12.8□□□□□ -0.36
HMGA1-203ENST00000374116 UTP23Q9BRU9 249 aaKnown RBP12.8□□□□□ -0.36
HMGA1-203ENST00000374116 RTN4RQ9BZR6 473 aa12.8□□□□□ -0.36
HMGA1-203ENST00000374116 ZNF436Q9C0F3 470 aaPredicted RBP12.8□□□□□ -0.36
HMGA1-203ENST00000374116 LAT2Q9GZY6 243 aa12.8□□□□□ -0.36
HMGA1-203ENST00000374116 DPAGT1Q9H3H5 408 aa12.8□□□□□ -0.36
HMGA1-203ENST00000374116 DLL4Q9NR61 685 aa12.8□□□□□ -0.36
HMGA1-203ENST00000374116 HPF1Q9NWY4 346 aa12.8□□□□□ -0.36
HMGA1-203ENST00000374116 ST6GALNAC2Q9UJ37 374 aa12.8□□□□□ -0.36
HMGA1-203ENST00000374116 HIF3AQ9Y2N7 669 aa12.8□□□□□ -0.36
HMGA1-203ENST00000374116 EXPH5Q8NEV8 1989 aa12.8□□□□□ -0.36
HMGA1-203ENST00000374116 A0A1W2PQD3 144 aa12.79□□□□□ -0.36
HMGA1-203ENST00000374116 OR5H15A6NDH6 313 aa12.79□□□□□ -0.36
HMGA1-203ENST00000374116 ICOSLGO75144 302 aa12.79□□□□□ -0.36
HMGA1-203ENST00000374116 NEURL1O76050 574 aa12.79□□□□□ -0.36
HMGA1-203ENST00000374116 PRB1P04280 392 aa12.79□□□□□ -0.36
HMGA1-203ENST00000374116 FGF2P09038 288 aa12.79□□□□□ -0.36
HMGA1-203ENST00000374116 APEHP13798 732 aaKnown RBP12.79□□□□□ -0.36
HMGA1-203ENST00000374116 CCR4P51679 360 aa12.79□□□□□ -0.36
HMGA1-203ENST00000374116 ERVK-25P63136 954 aa12.79□□□□□ -0.36
HMGA1-203ENST00000374116 ZNF74Q16587 644 aa12.79□□□□□ -0.36
HMGA1-203ENST00000374116 PRAMEF20Q5VT98 475 aa12.79□□□□□ -0.36
HMGA1-203ENST00000374116 LRFN4Q6PJG9 635 aa12.79□□□□□ -0.36
HMGA1-203ENST00000374116 IGFL2Q6UWQ7 119 aa12.79□□□□□ -0.36
HMGA1-203ENST00000374116 NR2C2APQ86WQ0 139 aa12.79□□□□□ -0.36
HMGA1-203ENST00000374116 ZADH2Q8N4Q0 377 aa12.79□□□□□ -0.36
HMGA1-203ENST00000374116 SLC22A8Q8TCC7 542 aa12.79□□□□□ -0.36
HMGA1-203ENST00000374116 SMAP2Q8WU79 429 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms