RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 IGF2P01344 180 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 GKN3PP0CG01 181 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 CPMP14384 443 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 POU3F2P20265 443 aaPredicted RBP10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 DCTDP32321 178 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 GPR143P51810 404 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 ERV3-1Q14264 604 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 VWA2Q5GFL6 755 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 LPCAT3Q6P1A2 487 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 MTFR2Q6P444 385 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 COX15Q7KZN9 410 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 COX18Q8N8Q8 333 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 SNIP1Q8TAD8 396 aaKnown RBP10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 ZCCHC14Q8WYQ9 949 aaKnown RBP10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 ZMYND19Q96E35 227 aaPredicted RBP10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 GPX7Q96SL4 187 aaPredicted RBP10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 NPAS1Q99742 590 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 PDCD1LG2Q9BQ51 273 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 MFFQ9GZY8 342 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 LYRM4Q9HD34 91 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 RASL12Q9NYN1 266 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 DKK4Q9UBT3 224 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 CTSFQ9UBX1 484 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 NDRG3Q9UGV2 375 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 ZNF107Q9UII5 783 aaPredicted RBP10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 FBXL4Q9UKA2 621 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 MRPS18BQ9Y676 258 aaKnown RBP10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 CACNA1AO00555 2505 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 ASPMQ8IZT6 3477 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 FXYD6-FXYD2A0A087WZ82 144 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 CENPVL1A0A0U1RR11 272 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 A0A1B0GWA3 101 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 RRP8O43159 456 aaKnown RBP10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 B3GALT2O43825 422 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 GLCEO94923 617 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 PMS2P2O95744 297 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 AKAIN1P0CW23 69 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 ZNF35P13682 527 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 HIST1H1CP16403 213 aaKnown RBP10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 EIF2S3P41091 472 aaKnown RBP10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 SLC25A1P53007 311 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 H2BFSP57053 126 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 RPS18P62269 152 aaKnown RBP10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 RPS15P62841 145 aaKnown RBP10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 SKP1P63208 163 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 S100A12P80511 92 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 RUNX2Q13950 521 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 CLVS2Q5SYC1 327 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 SHEQ5VZ18 495 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 NHLRC1Q6VVB1 395 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 MOB3CQ70IA8 216 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 ZNF550Q7Z398 422 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 LRRTM1Q86UE6 522 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 ZNF227Q86WZ6 799 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 TMEM151BQ8IW70 566 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 ZNF595Q8IYB9 648 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 ZNF417Q8TAU3 575 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 GINS4Q9BRT9 223 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 C1QTNF6Q9BXI9 259 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 FXYD6Q9H0Q3 95 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 MKKSQ9NPJ1 570 aaPredicted RBP10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 IL17BQ9UHF5 180 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 GPR160Q9UJ42 338 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 KCNE5Q9UJ90 142 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 PURGQ9UJV8 347 aaKnown RBP10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 COPS3Q9UNS2 423 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 MOKQ9UQ07 419 aa10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 FARSAQ9Y285 508 aaKnown RBP10.33□□□□□ -0.76
TSPAN1-201ENST00000372003 NUP210LQ5VU65 1888 aa10.32□□□□□ -0.76
TSPAN1-201ENST00000372003 OR2F2O95006 317 aa10.32□□□□□ -0.76
TSPAN1-201ENST00000372003 CD8AP01732 235 aa10.32□□□□□ -0.76
TSPAN1-201ENST00000372003 GYPBP06028 91 aa10.32□□□□□ -0.76
TSPAN1-201ENST00000372003 SLC25A4P12235 298 aa10.32□□□□□ -0.76
TSPAN1-201ENST00000372003 APEHP13798 732 aaKnown RBP10.32□□□□□ -0.76
TSPAN1-201ENST00000372003 LIFP15018 202 aa10.32□□□□□ -0.76
TSPAN1-201ENST00000372003 HOXA1P49639 335 aaPredicted RBP10.32□□□□□ -0.76
TSPAN1-201ENST00000372003 OR2F1Q13607 317 aa10.32□□□□□ -0.76
TSPAN1-201ENST00000372003 ALKBH1Q13686 389 aaKnown RBP10.32□□□□□ -0.76
TSPAN1-201ENST00000372003 PDSS1Q5T2R2 415 aa10.32□□□□□ -0.76
TSPAN1-201ENST00000372003 FCRLBQ6BAA4 426 aa10.32□□□□□ -0.76
TSPAN1-201ENST00000372003 ANKRD16Q6P6B7 361 aa10.32□□□□□ -0.76
TSPAN1-201ENST00000372003 ULK3Q6PHR2 472 aa10.32□□□□□ -0.76
TSPAN1-201ENST00000372003 SLC16A9Q7RTY1 509 aa10.32□□□□□ -0.76
TSPAN1-201ENST00000372003 FAM220AQ7Z4H9 259 aa10.32□□□□□ -0.76
TSPAN1-201ENST00000372003 RFLNBQ8N5W9 214 aa10.32□□□□□ -0.76
TSPAN1-201ENST00000372003 ZNF433Q8N7K0 673 aaPredicted RBP10.32□□□□□ -0.76
TSPAN1-201ENST00000372003 NPEPL1Q8NDH3 523 aa10.32□□□□□ -0.76
TSPAN1-201ENST00000372003 SDR9C7Q8NEX9 313 aa10.32□□□□□ -0.76
TSPAN1-201ENST00000372003 OR4C16Q8NGL9 310 aa10.32□□□□□ -0.76
TSPAN1-201ENST00000372003 STT3BQ8TCJ2 826 aa10.32□□□□□ -0.76
TSPAN1-201ENST00000372003 SLC25A21Q9BQT8 299 aaPredicted RBP10.32□□□□□ -0.76
TSPAN1-201ENST00000372003 SLC19A3Q9BZV2 496 aa10.32□□□□□ -0.76
TSPAN1-201ENST00000372003 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.32□□□□□ -0.76
TSPAN1-201ENST00000372003 STEAP1Q9UHE8 339 aa10.32□□□□□ -0.76
TSPAN1-201ENST00000372003 FBXL2Q9UKC9 423 aa10.32□□□□□ -0.76
TSPAN1-201ENST00000372003 DAPP1Q9UN19 280 aa10.32□□□□□ -0.76
TSPAN1-201ENST00000372003 SLC6A5Q9Y345 797 aa10.32□□□□□ -0.76
TSPAN1-201ENST00000372003 PTRH2Q9Y3E5 179 aaKnown RBP10.32□□□□□ -0.76
TSPAN1-201ENST00000372003 IER3IP1Q9Y5U9 82 aa10.32□□□□□ -0.76
TSPAN1-201ENST00000372003 TRBV5-7A0A0A0MS05 114 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms