RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 SSC4DQ8WTU2 575 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 BPIFA2Q96DR5 249 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 C1GALT1C1Q96EU7 318 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 PERPQ96FX8 193 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 Q96M85 177 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 PITX2Q99697 317 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 NMNAT1Q9HAN9 279 aaPredicted RBP6.28□□□□□ -1.4
USP1-202ENST00000371146 ASB6Q9NWX5 421 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 PLEK2Q9NYT0 353 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 PRSS50Q9UI38 385 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 PCDHGB5Q9Y5G0 923 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 TEX15Q9BXT5 2789 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 A0A1B0GV90 55 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 hCG_1807616A0A1W2PRN6 198 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 PRAMEF27A3QJZ7 478 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 TMEM200CA6NKL6 621 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 ALG1L2C9J202 215 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 SCELO95171 688 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 ADAP00813 363 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 ARAFP10398 606 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 ZNF250P15622 560 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 PAICSP22234 425 aaKnown RBP6.28□□□□□ -1.4
USP1-202ENST00000371146 MSX1P28360 303 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 LAP3P28838 519 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 CD40LGP29965 261 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 CSNK1A1P48729 337 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 POLR2HP52434 150 aaKnown RBP6.28□□□□□ -1.4
USP1-202ENST00000371146 VLDLRP98155 873 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 BTN1A1Q13410 526 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 TNK1Q13470 666 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 CEACAM16Q2WEN9 425 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 ARHGAP11BQ3KRB8 267 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 SLC36A3Q495N2 470 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 NHSL2Q5HYW2 709 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 SAXO2Q658L1 398 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 ULK3Q6PHR2 472 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 MSRB3Q8IXL7 192 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 MFSD4AQ8N468 514 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 GEMIN6Q8WXD5 167 aaKnown RBP6.28□□□□□ -1.4
USP1-202ENST00000371146 RASD2Q96D21 266 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 GPR137Q96N19 417 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 ZNF385AQ96PM9 386 aaKnown RBP6.28□□□□□ -1.4
USP1-202ENST00000371146 KATNB1Q9BVA0 655 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 PTDSS2Q9BVG9 487 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 CHMP1AQ9HD42 196 aaPredicted RBP6.28□□□□□ -1.4
USP1-202ENST00000371146 KRCC1Q9NPI7 259 aaPredicted RBP6.28□□□□□ -1.4
USP1-202ENST00000371146 PLSCR3Q9NRY6 295 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 BABAM2Q9NXR7 383 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 POMPQ9Y244 141 aa6.28□□□□□ -1.4
USP1-202ENST00000371146 ANKRD28O15084 1053 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 SLC22A5O76082 557 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 IL7P13232 177 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 ZP3P21754 424 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 G0S2P27469 103 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 PCGF2P35227 344 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 KIR2DL3P43628 341 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 SLC6A8P48029 635 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 SELENOPP49908 381 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 TLE4Q04727 773 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 FMODQ06828 376 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 MADCAM1Q13477 382 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 ZNF181Q2M3W8 571 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 ZNF791Q3KP31 576 aaPredicted RBP6.27□□□□□ -1.41
USP1-202ENST00000371146 DPPA2Q7Z7J5 298 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 KMT2EQ8IZD2 1858 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 DEFB108BQ8NET1 73 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 OR6N2Q8NGY6 317 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 ZNF675Q8TD23 568 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 NPRL2Q8WTW4 380 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 ADAD1Q96M93 576 aaKnown RBP6.27□□□□□ -1.41
USP1-202ENST00000371146 DCLRE1CQ96SD1 692 aaKnown RBP6.27□□□□□ -1.41
USP1-202ENST00000371146 CPPED1Q9BRF8 314 aaPredicted RBP6.27□□□□□ -1.41
USP1-202ENST00000371146 SYT4Q9H2B2 425 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 EGLN3Q9H6Z9 239 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 ZNF703Q9H7S9 590 aaPredicted RBP6.27□□□□□ -1.41
USP1-202ENST00000371146 EMC7Q9NPA0 242 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 ASH2LQ9UBL3 628 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 MAGEL2Q9UJ55 1249 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 PLEKHA6Q9Y2H5 1048 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 PCDHGB1Q9Y5G3 927 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 CLDN16Q9Y5I7 305 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 TRBV4-1A0A0J9YWV2 114 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 DKK1O94907 266 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 SLC2A10O95528 541 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 GCGRP47871 477 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 DYRK1AQ13627 763 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 NKPD1Q17RQ9 610 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 KLHL26Q53HC5 615 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 ARMCX4Q5H9R4 360 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 LEG1Q6P5S2 330 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 FBXW8Q8N3Y1 598 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 OR10G2Q8NGC3 310 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 NANPQ8TBE9 248 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 RAB2BQ8WUD1 216 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 MS4A3Q96HJ5 214 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 PYURFQ96I23 114 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 KCNJ15Q99712 375 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 MRPL37Q9BZE1 423 aaKnown RBP6.27□□□□□ -1.41
USP1-202ENST00000371146 CHRNA10Q9GZZ6 450 aa6.27□□□□□ -1.41
USP1-202ENST00000371146 PLEKHB1Q9UF11 243 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms