RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 LILRB1Q8NHL6 650 aaPredicted RBP12.87□□□□□ -0.35
COL9A1-204ENST00000370496 C11orf40Q8WZ69 217 aa12.87□□□□□ -0.35
COL9A1-204ENST00000370496 OSBPL10Q9BXB5 764 aa12.87□□□□□ -0.35
COL9A1-204ENST00000370496 CDH20Q9HBT6 801 aa12.87□□□□□ -0.35
COL9A1-204ENST00000370496 ASH2LQ9UBL3 628 aa12.87□□□□□ -0.35
COL9A1-204ENST00000370496 LRBAP50851 2863 aa12.86□□□□□ -0.35
COL9A1-204ENST00000370496 FAM183AA6NL82 134 aa12.86□□□□□ -0.35
COL9A1-204ENST00000370496 E7EQL1 145 aa12.86□□□□□ -0.35
COL9A1-204ENST00000370496 EI24O14681 340 aa12.86□□□□□ -0.35
COL9A1-204ENST00000370496 DOK2O60496 412 aa12.86□□□□□ -0.35
COL9A1-204ENST00000370496 ATE1O95260 518 aa12.86□□□□□ -0.35
COL9A1-204ENST00000370496 MPZL1O95297 269 aa12.86□□□□□ -0.35
COL9A1-204ENST00000370496 HMGN1P05114 100 aa12.86□□□□□ -0.35
COL9A1-204ENST00000370496 SCG5P05408 212 aa12.86□□□□□ -0.35
COL9A1-204ENST00000370496 GYPBP06028 91 aa12.86□□□□□ -0.35
COL9A1-204ENST00000370496 APEX1P27695 318 aaKnown RBP12.86□□□□□ -0.35
COL9A1-204ENST00000370496 LSM6P62312 80 aaKnown RBP12.86□□□□□ -0.35
COL9A1-204ENST00000370496 PPP2R2BQ00005 443 aa12.86□□□□□ -0.35
COL9A1-204ENST00000370496 SNTB2Q13425 540 aaKnown RBP12.86□□□□□ -0.35
COL9A1-204ENST00000370496 MEP1BQ16820 701 aa12.86□□□□□ -0.35
COL9A1-204ENST00000370496 TMEM236Q5W0B7 351 aa12.86□□□□□ -0.35
COL9A1-204ENST00000370496 KRT80Q6KB66 452 aa12.86□□□□□ -0.35
COL9A1-204ENST00000370496 ACSM5Q6NUN0 579 aa12.86□□□□□ -0.35
COL9A1-204ENST00000370496 VHLLQ6RSH7 139 aa12.86□□□□□ -0.35
COL9A1-204ENST00000370496 SYT9Q86SS6 491 aa12.86□□□□□ -0.35
COL9A1-204ENST00000370496 ALDH16A1Q8IZ83 802 aa12.86□□□□□ -0.35
COL9A1-204ENST00000370496 SLC26A10Q8NG04 563 aa12.86□□□□□ -0.35
COL9A1-204ENST00000370496 OR4F15Q8NGB8 312 aa12.86□□□□□ -0.35
COL9A1-204ENST00000370496 OR51L1Q8NGJ5 315 aa12.86□□□□□ -0.35
COL9A1-204ENST00000370496 OR6K6Q8NGW6 343 aa12.86□□□□□ -0.35
COL9A1-204ENST00000370496 AKR7LQ8NHP1 331 aa12.86□□□□□ -0.35
COL9A1-204ENST00000370496 SMAP2Q8WU79 429 aaPredicted RBP12.86□□□□□ -0.35
COL9A1-204ENST00000370496 TMEM171Q8WVE6 324 aa12.86□□□□□ -0.35
COL9A1-204ENST00000370496 ZNF75AQ96N20 296 aa12.86□□□□□ -0.35
COL9A1-204ENST00000370496 DHRS9Q9BPW9 319 aa12.86□□□□□ -0.35
COL9A1-204ENST00000370496 OR2H1Q9GZK4 316 aa12.86□□□□□ -0.35
COL9A1-204ENST00000370496 RIBC2Q9H4K1 309 aa12.86□□□□□ -0.35
COL9A1-204ENST00000370496 TIMM10BQ9Y5J6 103 aa12.86□□□□□ -0.35
COL9A1-204ENST00000370496 AKAP6Q13023 2319 aa12.86□□□□□ -0.35
COL9A1-204ENST00000370496 PRR23D1E9PI22 279 aaPredicted RBP12.85□□□□□ -0.35
COL9A1-204ENST00000370496 SURF4O15260 269 aa12.85□□□□□ -0.35
COL9A1-204ENST00000370496 PRR23D2P0DMB1 279 aaPredicted RBP12.85□□□□□ -0.35
COL9A1-204ENST00000370496 SPI1P17947 270 aa12.85□□□□□ -0.35
COL9A1-204ENST00000370496 CCNOP22674 350 aa12.85□□□□□ -0.35
COL9A1-204ENST00000370496 FABP6P51161 128 aa12.85□□□□□ -0.35
COL9A1-204ENST00000370496 SLC25A1P53007 311 aa12.85□□□□□ -0.35
COL9A1-204ENST00000370496 CDK5Q00535 292 aa12.85□□□□□ -0.35
COL9A1-204ENST00000370496 PSG4Q00888 419 aa12.85□□□□□ -0.35
COL9A1-204ENST00000370496 TEKQ02763 1124 aa12.85□□□□□ -0.35
COL9A1-204ENST00000370496 DAG1Q14118 895 aa12.85□□□□□ -0.35
COL9A1-204ENST00000370496 RCN1Q15293 331 aa12.85□□□□□ -0.35
COL9A1-204ENST00000370496 FBXL14Q8N1E6 418 aa12.85□□□□□ -0.35
COL9A1-204ENST00000370496 OR1J2Q8NGS2 313 aa12.85□□□□□ -0.35
COL9A1-204ENST00000370496 PIGTQ969N2 578 aa12.85□□□□□ -0.35
COL9A1-204ENST00000370496 WACQ9BTA9 647 aa12.85□□□□□ -0.35
COL9A1-204ENST00000370496 C9orf16Q9BUW7 83 aa12.85□□□□□ -0.35
COL9A1-204ENST00000370496 WNT5BQ9H1J7 359 aa12.85□□□□□ -0.35
COL9A1-204ENST00000370496 MED20Q9H944 212 aa12.85□□□□□ -0.35
COL9A1-204ENST00000370496 CA10Q9NS85 328 aa12.85□□□□□ -0.35
COL9A1-204ENST00000370496 TMEFF2Q9UIK5 374 aaPredicted RBP12.85□□□□□ -0.35
COL9A1-204ENST00000370496 LAMP3Q9UQV4 416 aa12.85□□□□□ -0.35
COL9A1-204ENST00000370496 SPEF1Q9Y4P9 236 aa12.85□□□□□ -0.35
COL9A1-204ENST00000370496 DSCAMO60469 2012 aa12.85□□□□□ -0.35
COL9A1-204ENST00000370496 ROS1P08922 2347 aa12.84□□□□□ -0.35
COL9A1-204ENST00000370496 SGCEO43556 437 aa12.84□□□□□ -0.35
COL9A1-204ENST00000370496 CLUP10909 449 aa12.84□□□□□ -0.35
COL9A1-204ENST00000370496 CCL2P13500 99 aa12.84□□□□□ -0.35
COL9A1-204ENST00000370496 ZNF823P16415 610 aa12.84□□□□□ -0.35
COL9A1-204ENST00000370496 CD53P19397 219 aa12.84□□□□□ -0.35
COL9A1-204ENST00000370496 STOMP27105 288 aa12.84□□□□□ -0.35
COL9A1-204ENST00000370496 HTR5AP47898 357 aa12.84□□□□□ -0.35
COL9A1-204ENST00000370496 GDI2P50395 445 aaKnown RBP12.84□□□□□ -0.35
COL9A1-204ENST00000370496 RPS23P62266 143 aaKnown RBP12.84□□□□□ -0.35
COL9A1-204ENST00000370496 ADAM8P78325 824 aa12.84□□□□□ -0.35
COL9A1-204ENST00000370496 PTGES3Q15185 160 aaKnown RBP12.84□□□□□ -0.35
COL9A1-204ENST00000370496 SNAPC1Q16533 368 aa12.84□□□□□ -0.35
COL9A1-204ENST00000370496 KCNMB1Q16558 191 aa12.84□□□□□ -0.35
COL9A1-204ENST00000370496 ZNF362Q5T0B9 420 aaPredicted RBP12.84□□□□□ -0.35
COL9A1-204ENST00000370496 AGAP6Q5VW22 663 aa12.84□□□□□ -0.35
COL9A1-204ENST00000370496 ZNF774Q6NX45 483 aa12.84□□□□□ -0.35
COL9A1-204ENST00000370496 ZNF544Q6NX49 715 aa12.84□□□□□ -0.35
COL9A1-204ENST00000370496 PLBD1Q6P4A8 553 aa12.84□□□□□ -0.35
COL9A1-204ENST00000370496 CBR4Q8N4T8 237 aa12.84□□□□□ -0.35
COL9A1-204ENST00000370496 NUP37Q8NFH4 326 aa12.84□□□□□ -0.35
COL9A1-204ENST00000370496 EME1Q96AY2 570 aa12.84□□□□□ -0.35
COL9A1-204ENST00000370496 CDADC1Q9BWV3 514 aa12.84□□□□□ -0.35
COL9A1-204ENST00000370496 GABARAPL3Q9BY60 117 aa12.84□□□□□ -0.35
COL9A1-204ENST00000370496 NMNAT2Q9BZQ4 307 aa12.84□□□□□ -0.35
COL9A1-204ENST00000370496 CXorf56Q9H5V9 222 aa12.84□□□□□ -0.35
COL9A1-204ENST00000370496 PLEK2Q9NYT0 353 aa12.84□□□□□ -0.35
COL9A1-204ENST00000370496 TVP23BQ9NYZ1 205 aa12.84□□□□□ -0.35
COL9A1-204ENST00000370496 NDRG4Q9ULP0 352 aaKnown RBP12.84□□□□□ -0.35
COL9A1-204ENST00000370496 NAV2Q8IVL1 2488 aa12.84□□□□□ -0.35
COL9A1-204ENST00000370496 PLCE1Q9P212 2302 aa12.84□□□□□ -0.35
COL9A1-204ENST00000370496 SPG11Q96JI7 2443 aa12.84□□□□□ -0.35
COL9A1-204ENST00000370496 C5orf49A4QMS7 147 aa12.83□□□□□ -0.36
COL9A1-204ENST00000370496 TVP23AA6NH52 213 aa12.83□□□□□ -0.36
COL9A1-204ENST00000370496 SNAP29O95721 258 aa12.83□□□□□ -0.36
COL9A1-204ENST00000370496 TFP02787 698 aa12.83□□□□□ -0.36
COL9A1-204ENST00000370496 ALPLP05186 524 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms