RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 BEST4Q8NFU0 473 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 OR56B1Q8NGI3 324 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 OR2G2Q8NGZ5 317 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 OTOSQ8NHW6 89 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 CPT1CQ8TCG5 803 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 CASTOR1Q8WTX7 329 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 EDEM2Q9BV94 578 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 SLC22A11Q9NSA0 550 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 FAM86C1Q9NVL1 165 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 KCNN3Q9UGI6 736 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 RAB22AQ9UL26 194 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 TDRD6O60522 2096 aaKnown RBP4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 IGHV5-10-1A0A0J9YXX1 117 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 IFITM5A6NNB3 132 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 GABARAPH6UMI1 98 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 P2RY10O00398 339 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 PEX14O75381 377 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 RP2O75695 350 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 BPNT1O95861 308 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 PAHP00439 452 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 S100A6P06703 90 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 CD79AP11912 226 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 GABRB1P18505 474 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 ELK1P19419 428 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 RPS4Y1P22090 263 aaKnown RBP4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 ACAA2P42765 397 aaKnown RBP4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 HTR5AP47898 357 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 CLDN12P56749 244 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 BTG1P62324 171 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 RBMS2Q15434 407 aaKnown RBP4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 CD226Q15762 336 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 DEGS2Q6QHC5 323 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 ESPNLQ6ZVH7 1005 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 KCTD9Q7L273 389 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 DOK3Q7L591 496 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 ZAR1Q86SH2 424 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 ZNF615Q8N8J6 731 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 NLGN4YQ8NFZ3 816 aaPredicted RBP4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 OR13C9Q8NGT0 318 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 GPR119Q8TDV5 335 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 FAM131CQ96AQ9 280 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 SLAMF6Q96DU3 332 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 ELMOD3Q96FG2 381 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 MAP6Q96JE9 813 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 OR8B4Q96RC9 309 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 SLC6A7Q99884 636 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 EMC6Q9BV81 110 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 ARL6Q9H0F7 186 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 NOX3Q9HBY0 568 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 B3GNT2Q9NY97 397 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 LRFN1Q9P244 771 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 R4GMQ9 66 aa4.81□□□□□ -1.64
SMNDC1-202ENST00000369603 LOC107986453A0A1B0GWG9 222 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 A0A1W2PNR3 127 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 OR6C68A6NDL8 312 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 OR2AT4A6NND4 320 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 ZNF587BE7ETH6 402 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 H7C2Y5 167 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 HRKO00198 91 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 ARPC1BO15143 372 aaKnown RBP4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 SC5DO75845 299 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 SLC22A5O76082 557 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 HTR3BO95264 441 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 DIRAS3O95661 229 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 SERPINA5P05154 406 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 CHRM2P08172 466 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 QDPRP09417 244 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 PVALBP20472 110 aaPredicted RBP4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 ADH6P28332 368 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 CCR9P51686 369 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 ARHGDIBP52566 201 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 DLX5P56178 289 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 FXYD6P3P58550 94 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 RAB2AP61019 212 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 ZXDAP98168 799 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 CYCSP99999 105 aaKnown RBP4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 BTN1A1Q13410 526 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 CDONQ4KMG0 1287 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 GLYATL3Q5SZD4 288 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 LYPD4Q6UWN0 246 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 ARSKQ6UWY0 536 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 LINC00696Q6ZRV3 163 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 ZSCAN4Q8NAM6 433 aaPredicted RBP4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 OR2Y1Q8NGV0 311 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 M1APQ8TC57 530 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 ZNF721Q8TF20 911 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 PELI1Q96FA3 418 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 NECAB3Q96P71 396 aaPredicted RBP4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 DHRS9Q9BPW9 319 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 SRRQ9GZT4 340 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 PPA2Q9H2U2 334 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 SAV1Q9H4B6 383 aaPredicted RBP4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 ZNF442Q9H7R0 627 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 A0A0G2JMP0 313 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 C13orf42A0A1B0GVH6 325 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 ANKRD30BLA7E2S9 258 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 ZNF850A8MQ14 1090 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 M0R296 226 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 TO15178 435 aa4.8□□□□□ -1.64
SMNDC1-202ENST00000369603 SCO1O75880 301 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms