RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 KIAA1549Q9HCM3 1950 aa10.76□□□□□ -0.69
USF1-203ENST00000368021 ZNF462Q96JM2 2506 aa10.75□□□□□ -0.69
USF1-203ENST00000368021 TRAV17A0A0B4J275 112 aa10.75□□□□□ -0.69
USF1-203ENST00000368021 DAPL1A0PJW8 107 aa10.75□□□□□ -0.69
USF1-203ENST00000368021 ZNF814B7Z6K7 855 aa10.75□□□□□ -0.69
USF1-203ENST00000368021 H7C1C5 153 aa10.75□□□□□ -0.69
USF1-203ENST00000368021 ACOT7O00154 380 aa10.75□□□□□ -0.69
USF1-203ENST00000368021 DCTN6O00399 190 aa10.75□□□□□ -0.69
USF1-203ENST00000368021 TNFSF11O14788 317 aa10.75□□□□□ -0.69
USF1-203ENST00000368021 TRAF3IP2O43734 574 aaPredicted RBP10.75□□□□□ -0.69
USF1-203ENST00000368021 HSMCR30P0CW71 290 aa10.75□□□□□ -0.69
USF1-203ENST00000368021 ZNF43P17038 809 aa10.75□□□□□ -0.69
USF1-203ENST00000368021 RAB3AP20336 220 aa10.75□□□□□ -0.69
USF1-203ENST00000368021 HLA-DMAP28067 261 aa10.75□□□□□ -0.69
USF1-203ENST00000368021 CRABP1P29762 137 aa10.75□□□□□ -0.69
USF1-203ENST00000368021 CAPZA2P47755 286 aa10.75□□□□□ -0.69
USF1-203ENST00000368021 CLDN20P56880 219 aa10.75□□□□□ -0.69
USF1-203ENST00000368021 LCN6P62502 163 aa10.75□□□□□ -0.69
USF1-203ENST00000368021 PPIAP62937 165 aaKnown RBP10.75□□□□□ -0.69
USF1-203ENST00000368021 DBPQ10586 325 aaPredicted RBP10.75□□□□□ -0.69
USF1-203ENST00000368021 MELKQ14680 651 aa10.75□□□□□ -0.69
USF1-203ENST00000368021 TOR2AQ5JU69 321 aa10.75□□□□□ -0.69
USF1-203ENST00000368021 ZBTB37Q5TC79 503 aa10.75□□□□□ -0.69
USF1-203ENST00000368021 STEAP3Q658P3 488 aa10.75□□□□□ -0.69
USF1-203ENST00000368021 IGFL3Q6UXB1 125 aa10.75□□□□□ -0.69
USF1-203ENST00000368021 TMPRSS11AQ6ZMR5 421 aa10.75□□□□□ -0.69
USF1-203ENST00000368021 CDH24Q86UP0 819 aa10.75□□□□□ -0.69
USF1-203ENST00000368021 ZNF843Q8N446 348 aa10.75□□□□□ -0.69
USF1-203ENST00000368021 KBTBD8Q8NFY9 601 aa10.75□□□□□ -0.69
USF1-203ENST00000368021 OR10H4Q8NGA5 316 aa10.75□□□□□ -0.69
USF1-203ENST00000368021 ST6GAL2Q96JF0 529 aa10.75□□□□□ -0.69
USF1-203ENST00000368021 ALG8Q9BVK2 526 aa10.75□□□□□ -0.69
USF1-203ENST00000368021 NXF2Q9GZY0 626 aaKnown RBP10.75□□□□□ -0.69
USF1-203ENST00000368021 NUAK2Q9H093 628 aa10.75□□□□□ -0.69
USF1-203ENST00000368021 TSPAN10Q9H1Z9 355 aaPredicted RBP10.75□□□□□ -0.69
USF1-203ENST00000368021 SRA1Q9HD15 236 aaKnown RBP10.75□□□□□ -0.69
USF1-203ENST00000368021 ABCB10Q9NRK6 738 aa10.75□□□□□ -0.69
USF1-203ENST00000368021 MED29Q9NX70 200 aa10.75□□□□□ -0.69
USF1-203ENST00000368021 DNAJC13O75165 2243 aa10.75□□□□□ -0.69
USF1-203ENST00000368021 ZNF407Q9C0G0 2248 aa10.75□□□□□ -0.69
USF1-203ENST00000368021 FAM166BA8MTA8 275 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 EIF1AYO14602 144 aaKnown RBP10.74□□□□□ -0.69
USF1-203ENST00000368021 TFP02787 698 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 MRPL3P09001 348 aaKnown RBP10.74□□□□□ -0.69
USF1-203ENST00000368021 PYCR1P32322 319 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 RFC3P40938 356 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 NKX2-5P52952 324 aaPredicted RBP10.74□□□□□ -0.69
USF1-203ENST00000368021 CARD18P57730 90 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 FLI1Q01543 452 aaPredicted RBP10.74□□□□□ -0.69
USF1-203ENST00000368021 BDH1Q02338 343 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 RIN1Q13671 783 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 DOC2BQ14184 412 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 SPANXN2Q5MJ10 180 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 PDSS1Q5T2R2 415 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 OR2G6Q5TZ20 316 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 HBMQ6B0K9 141 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 ZNF322Q6U7Q0 402 aaPredicted RBP10.74□□□□□ -0.69
USF1-203ENST00000368021 ZNF600Q6ZNG1 722 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.74□□□□□ -0.69
USF1-203ENST00000368021 LUZP2Q86TE4 346 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 GPAT4Q86UL3 456 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 TEX19Q8NA77 164 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 OR6X1Q8NH79 312 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 OR2V1Q8NHB1 315 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 TM9SF4Q92544 642 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 INTS12Q96CB8 462 aaKnown RBP10.74□□□□□ -0.69
USF1-203ENST00000368021 SLC25A44Q96H78 314 aaPredicted RBP10.74□□□□□ -0.69
USF1-203ENST00000368021 RNF170Q96K19 258 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 ADAD1Q96M93 576 aaKnown RBP10.74□□□□□ -0.69
USF1-203ENST00000368021 MNTQ99583 582 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 SF3B5Q9BWJ5 86 aaKnown RBP10.74□□□□□ -0.69
USF1-203ENST00000368021 KLHL13Q9P2N7 655 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 B9D1Q9UPM9 204 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 CSAG2Q9Y5P2 127 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 IGLV1-36A0A0B4J1U3 117 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 A0A1W2PQL4 384 aaPredicted RBP10.74□□□□□ -0.69
USF1-203ENST00000368021 LEUTXA8MZ59 168 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 PRSS44E7EML9 344 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 CTDSP2O14595 271 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 AKAP8O43823 692 aaKnown RBP10.74□□□□□ -0.69
USF1-203ENST00000368021 C1QBP02746 253 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 CELA3AP09093 270 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 PSKH1P11801 424 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 CPEP16870 476 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 LHX2P50458 406 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 BIDP55957 195 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 ACTA2P62736 377 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 ACTG2P63267 376 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 HSF2Q03933 536 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 GPR50Q13585 617 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 SLC10A1Q14973 349 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 TIMM50Q3ZCQ8 353 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 DNM1P34Q6PK57 102 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 SLC16A9Q7RTY1 509 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 SLC35F2Q8IXU6 374 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 TIGD4Q8IY51 512 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 GATAD2BQ8WXI9 593 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 SNAPC3Q92966 411 aa10.74□□□□□ -0.69
USF1-203ENST00000368021 CPNE4Q96A23 557 aaPredicted RBP10.74□□□□□ -0.69
USF1-203ENST00000368021 MRPL48Q96GC5 212 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms