RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 ZNF628Q5EBL2 1059 aa4.91□□□□□ -1.62
CDC42BPA-204ENST00000366767 BPIFB2Q8N4F0 458 aa4.91□□□□□ -1.62
CDC42BPA-204ENST00000366767 LINC01555Q8NAE3 123 aa4.91□□□□□ -1.62
CDC42BPA-204ENST00000366767 OR51T1Q8NGJ9 327 aa4.91□□□□□ -1.62
CDC42BPA-204ENST00000366767 OR10D4PQ8NGN7 298 aa4.91□□□□□ -1.62
CDC42BPA-204ENST00000366767 DDOQ99489 341 aa4.91□□□□□ -1.62
CDC42BPA-204ENST00000366767 ALG12Q9BV10 488 aa4.91□□□□□ -1.62
CDC42BPA-204ENST00000366767 ST6GALNAC5Q9BVH7 336 aa4.91□□□□□ -1.62
CDC42BPA-204ENST00000366767 JAM3Q9BX67 310 aa4.91□□□□□ -1.62
CDC42BPA-204ENST00000366767 STEAP1Q9UHE8 339 aa4.91□□□□□ -1.62
CDC42BPA-204ENST00000366767 DKKL1Q9UK85 242 aa4.91□□□□□ -1.62
CDC42BPA-204ENST00000366767 KNTC1P50748 2209 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 ARGFXA6NJG6 315 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 C11orf98E9PRG8 122 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 CD1AP06126 327 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 SMIM6P0DI80 62 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 FABP4P15090 132 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 RAB5AP20339 215 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 NFYBP25208 207 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 H3F3AP84243 136 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 UBXN2BQ14CS0 331 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 CEBPEQ15744 281 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 FAM209BQ5JX69 171 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 ARTNQ5T4W7 220 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 FBXL6Q8N531 539 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 LILRB1Q8NHL6 650 aaPredicted RBP4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 FBXW5Q969U6 566 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 SMIM19Q96E16 107 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 KLRF1Q9NZS2 232 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 DSPPQ9NZW4 1301 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 KLK3P07288 261 aaPredicted RBP4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 HOXB5P09067 269 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 CLDN6P56747 220 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 TAS2R30P59541 319 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 GPR176Q14439 515 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 ZNF793Q6ZN11 406 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 PPP1R3BQ86XI6 285 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 CRIPAKQ8N1N5 446 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 LFNGQ8NES3 379 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 PFN4Q8NHR9 129 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 HLA-CQ95604 372 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 MARVELD1Q9BSK0 173 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 METTL7AQ9H8H3 244 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 SLC23A1Q9UHI7 598 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 C9J4A7 227 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 RGS13O14921 159 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 GCM2O75603 506 aaPredicted RBP4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 RPLP1P05386 114 aaKnown RBP4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 SDHAP31040 664 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 DRD3P35462 400 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 SLC17A1Q14916 467 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 KLHDC1Q8N7A1 406 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 SLC24A4Q8NFF2 622 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 OR6F1Q8NGZ6 308 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 POM121Q96HA1 1249 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 CHRNA9Q9UGM1 479 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 V9GYH0 126 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 SNRPGP15A8MWD9 76 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 PPP5D1E7EU14 171 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 M0R143 59 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 FFAR1O14842 300 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 ZNF749O43361 778 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 ZNF25P17030 456 aaPredicted RBP4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 PTGER1P34995 402 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 SRP9P49458 86 aaKnown RBP4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 DUSP3P51452 185 aaPredicted RBP4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 CXADRP78310 365 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 MRPS34P82930 218 aaKnown RBP4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 SLC9A3R2Q15599 337 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 ZNF74Q16587 644 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 GUK1Q16774 197 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 UQCC3Q6UW78 93 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 OR5D14Q8NGL3 314 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 OR51Q1Q8NH59 317 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 MRPL38Q96DV4 380 aaKnown RBP4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 MCOLN1Q9GZU1 580 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 ARL2-SNX15V9GYD0 113 aa4.9□□□□□ -1.62
CDC42BPA-204ENST00000366767 SEC16AO15027 2179 aa4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 MT-ND4LP03901 98 aa4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 GYPBP06028 91 aa4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 OC90Q02509 493 aaPredicted RBP4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 SSBP1Q04837 148 aaKnown RBP4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 IQCJQ1A5X6 159 aa4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 TMEM225Q6GV28 225 aa4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 MEX3BQ6ZN04 569 aaKnown RBP4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 UCN3Q969E3 161 aa4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 RBMXL1Q96E39 390 aaKnown RBP4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 SDSLQ96GA7 329 aa4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 SLC25A21Q9BQT8 299 aaPredicted RBP4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 VAMP8Q9BV40 100 aa4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 LAT2Q9GZY6 243 aa4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 FKRPQ9H9S5 495 aa4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 ABI3Q9P2A4 366 aa4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 PCOLCE2Q9UKZ9 415 aa4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 LSM2Q9Y333 95 aaKnown RBP4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 SNRPBP14678 240 aaKnown RBP4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 PPICP45877 212 aa4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 CX3CR1P49238 355 aa4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 RPP30P78346 268 aaKnown RBP4.9□□□□□ -1.63
CDC42BPA-204ENST00000366767 CAMK2DQ13557 499 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms