RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 CRHR1P34998 444 aa6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 PITPNBP48739 271 aa6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 EFNB2P52799 333 aa6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 BPIFB3P59826 476 aa6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 EMX2Q04743 252 aa6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 BST1Q10588 318 aa6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 COX10Q12887 443 aa6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 NSUN5P1Q3KNT7 163 aa6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 MTX3Q5HYI7 312 aa6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 DHRS7BQ6IAN0 325 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 ZNF572Q7Z3I7 529 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 PXKQ7Z7A4 578 aa6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 LRRC34Q8IZ02 419 aa6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 SCAIQ8N9R8 606 aa6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 C19orf18Q8NEA5 215 aa6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 OR1J2Q8NGS2 313 aa6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 OR6X1Q8NH79 312 aa6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 ABHD4Q8TB40 342 aa6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 SLC38A5Q8WUX1 472 aa6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 NABP1Q96AH0 204 aa6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 TUBGCP3Q96CW5 907 aa6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 NEIL1Q96FI4 390 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 THOC1Q96FV9 657 aaKnown RBP6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 CCDC115Q96NT0 180 aa6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 OR2V2Q96R30 315 aa6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 FMO2Q99518 471 aa6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 SPATA9Q9BWV2 254 aa6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 SIRPDQ9H106 197 aa6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 C1orf198Q9H425 327 aa6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 CYSLTR2Q9NS75 346 aa6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 ASIC5Q9NY37 505 aa6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 MRPL39Q9NYK5 338 aaKnown RBP6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 CTSZQ9UBR2 303 aa6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 UGT2A1Q9Y4X1 527 aa6.99□□□□□ -1.29
HMGB1P39-201ENST00000366304 DNAH7Q8WXX0 4024 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 IQCMA0A1B0GVH7 501 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 TMEM238LA0A1B0GVL6 79 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 CCDC154A6NI56 674 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 TIMM8AO60220 97 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 TPST2O60704 377 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 TRIM13O60858 407 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 TOX4O94842 621 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 BCHEP06276 602 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 ABHD2P08910 425 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 ZNF32P17041 273 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 AHCYP23526 432 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 IL12AP29459 219 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 APLNRP35414 380 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 DLX1P56177 255 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 PSG4Q00888 419 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 ZSCAN26Q16670 478 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 HIST3H3Q16695 136 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 CCDC153Q494R4 210 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 ZNF404Q494X3 552 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 SLC36A2Q495M3 483 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 DEFB121Q5J5C9 76 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 GDPGP1Q6ZNW5 385 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 Q6ZTK2 550 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 SLC35D2Q76EJ3 337 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 NET1Q7Z628 596 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 SNX32Q86XE0 403 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 KLHDC1Q8N7A1 406 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 CCDC63Q8NA47 563 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 GATAD2BQ8WXI9 593 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 IFT81Q8WYA0 676 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 LHX4Q969G2 390 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 MCHR2Q969V1 340 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 TESCQ96BS2 214 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 PPP1R36Q96LQ0 422 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 ZNF347Q96SE7 839 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 RHOXF2Q9BQY4 288 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 WNT5BQ9H1J7 359 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 TAS2R5Q9NYW4 299 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 FBLN5Q9UBX5 448 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 MIOXQ9UGB7 285 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 VPREB3Q9UKI3 123 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 HIF3AQ9Y2N7 669 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 USH1CQ9Y6N9 552 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 LYSTQ99698 3801 aa6.98□□□□□ -1.29
HMGB1P39-201ENST00000366304 P2RY10O00398 339 aa6.97□□□□□ -1.29
HMGB1P39-201ENST00000366304 RIPK2O43353 540 aa6.97□□□□□ -1.29
HMGB1P39-201ENST00000366304 XPNPEP2O43895 674 aa6.97□□□□□ -1.29
HMGB1P39-201ENST00000366304 LIPAP38571 399 aa6.97□□□□□ -1.29
HMGB1P39-201ENST00000366304 HSF2Q03933 536 aa6.97□□□□□ -1.29
HMGB1P39-201ENST00000366304 PLP2Q04941 152 aa6.97□□□□□ -1.29
HMGB1P39-201ENST00000366304 ZBTB37Q5TC79 503 aa6.97□□□□□ -1.29
HMGB1P39-201ENST00000366304 ANXA8L1Q5VT79 327 aa6.97□□□□□ -1.29
HMGB1P39-201ENST00000366304 C8orf74Q6P047 294 aa6.97□□□□□ -1.29
HMGB1P39-201ENST00000366304 C10orf67Q8IYJ2 551 aa6.97□□□□□ -1.29
HMGB1P39-201ENST00000366304 LSMEM1Q8N8F7 131 aa6.97□□□□□ -1.29
HMGB1P39-201ENST00000366304 VPS37AQ8NEZ2 397 aa6.97□□□□□ -1.29
HMGB1P39-201ENST00000366304 OR10AD1Q8NGE0 317 aa6.97□□□□□ -1.29
HMGB1P39-201ENST00000366304 OR8B3Q8NGG8 313 aa6.97□□□□□ -1.29
HMGB1P39-201ENST00000366304 OR6S1Q8NH40 331 aa6.97□□□□□ -1.29
HMGB1P39-201ENST00000366304 ZNF566Q969W8 418 aa6.97□□□□□ -1.29
HMGB1P39-201ENST00000366304 SLC25A44Q96H78 314 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P39-201ENST00000366304 TMEM19Q96HH6 336 aa6.97□□□□□ -1.29
HMGB1P39-201ENST00000366304 WDFY2Q96P53 400 aa6.97□□□□□ -1.29
HMGB1P39-201ENST00000366304 OR8B2Q96RD0 313 aa6.97□□□□□ -1.29
HMGB1P39-201ENST00000366304 ZNF607Q96SK3 696 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms