RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 MMACHCQ9Y4U1 282 aa1.72□□□□□ -2.13
RNU6-553P-201ENST00000364047 CENPVL3A0A0U1RRI6 287 aa1.71□□□□□ -2.14
RNU6-553P-201ENST00000364047 H0YJW9 148 aa1.71□□□□□ -2.14
RNU6-553P-201ENST00000364047 PPP1R2P9O14990 202 aa1.71□□□□□ -2.14
RNU6-553P-201ENST00000364047 SOCS1O15524 211 aa1.71□□□□□ -2.14
RNU6-553P-201ENST00000364047 FGGP02679 453 aa1.71□□□□□ -2.14
RNU6-553P-201ENST00000364047 ACTG2P63267 376 aa1.71□□□□□ -2.14
RNU6-553P-201ENST00000364047 CDH17Q12864 832 aa1.71□□□□□ -2.14
RNU6-553P-201ENST00000364047 H2BFWTQ7Z2G1 175 aa1.71□□□□□ -2.14
RNU6-553P-201ENST00000364047 METTL13Q8N6R0 699 aa1.71□□□□□ -2.14
RNU6-553P-201ENST00000364047 OR4F6Q8NGB9 312 aa1.71□□□□□ -2.14
RNU6-553P-201ENST00000364047 OR1L6Q8NGR2 347 aa1.71□□□□□ -2.14
RNU6-553P-201ENST00000364047 RHEBL1Q8TAI7 183 aa1.71□□□□□ -2.14
RNU6-553P-201ENST00000364047 CXorf40AQ8TE69 158 aa1.71□□□□□ -2.14
RNU6-553P-201ENST00000364047 SHC3Q92529 594 aa1.71□□□□□ -2.14
RNU6-553P-201ENST00000364047 MRGPRFQ96AM1 343 aa1.71□□□□□ -2.14
RNU6-553P-201ENST00000364047 TVP23CQ96ET8 276 aa1.71□□□□□ -2.14
RNU6-553P-201ENST00000364047 CNDP1Q96KN2 507 aa1.71□□□□□ -2.14
RNU6-553P-201ENST00000364047 C12orf42Q96LP6 360 aa1.71□□□□□ -2.14
RNU6-553P-201ENST00000364047 SERPINB12Q96P63 405 aa1.71□□□□□ -2.14
RNU6-553P-201ENST00000364047 ERP44Q9BS26 406 aa1.71□□□□□ -2.14
RNU6-553P-201ENST00000364047 FRMD8P1Q9BZ68 369 aaPredicted RBP1.71□□□□□ -2.14
RNU6-553P-201ENST00000364047 CTNNA3Q9UI47 895 aa1.71□□□□□ -2.14
RNU6-553P-201ENST00000364047 TSSC4Q9Y5U2 329 aaPredicted RBP1.71□□□□□ -2.14
RNU6-553P-201ENST00000364047 IGHV3OR16-8A0A075B7F1 116 aa1.7□□□□□ -2.14
RNU6-553P-201ENST00000364047 A0A1W2PPV9 198 aa1.7□□□□□ -2.14
RNU6-553P-201ENST00000364047 ZNF98A6NK75 572 aa1.7□□□□□ -2.14
RNU6-553P-201ENST00000364047 PCP4L1A6NKN8 68 aa1.7□□□□□ -2.14
RNU6-553P-201ENST00000364047 POLR1CO15160 346 aaPredicted RBP1.7□□□□□ -2.14
RNU6-553P-201ENST00000364047 GMFGO60234 142 aa1.7□□□□□ -2.14
RNU6-553P-201ENST00000364047 DPM1O60762 260 aa1.7□□□□□ -2.14
RNU6-553P-201ENST00000364047 HLA-DQB1P01920 261 aa1.7□□□□□ -2.14
RNU6-553P-201ENST00000364047 ZNF688P0C7X2 276 aa1.7□□□□□ -2.14
RNU6-553P-201ENST00000364047 ATP1B2P14415 290 aaPredicted RBP1.7□□□□□ -2.14
RNU6-553P-201ENST00000364047 GPX6P59796 221 aa1.7□□□□□ -2.14
RNU6-553P-201ENST00000364047 UBE2NP61088 152 aaKnown RBP1.7□□□□□ -2.14
RNU6-553P-201ENST00000364047 IMMTQ16891 758 aaKnown RBP1.7□□□□□ -2.14
RNU6-553P-201ENST00000364047 CCDC73Q6ZRK6 1079 aa1.7□□□□□ -2.14
RNU6-553P-201ENST00000364047 EFL1Q7Z2Z2 1120 aaKnown RBP1.7□□□□□ -2.14
RNU6-553P-201ENST00000364047 LIX1Q8N485 282 aa1.7□□□□□ -2.14
RNU6-553P-201ENST00000364047 EID2Q8N6I1 236 aa1.7□□□□□ -2.14
RNU6-553P-201ENST00000364047 STEAP2Q8NFT2 490 aa1.7□□□□□ -2.14
RNU6-553P-201ENST00000364047 OR6N1Q8NGY5 312 aa1.7□□□□□ -2.14
RNU6-553P-201ENST00000364047 PTX4Q96A99 478 aa1.7□□□□□ -2.14
RNU6-553P-201ENST00000364047 TCEANC2Q96MN5 208 aa1.7□□□□□ -2.14
RNU6-553P-201ENST00000364047 SLC38A10Q9HBR0 1119 aa1.7□□□□□ -2.14
RNU6-553P-201ENST00000364047 SAMSN1Q9NSI8 373 aaKnown RBP1.7□□□□□ -2.14
RNU6-553P-201ENST00000364047 TRAV6A0A075B6T7 132 aa1.69□□□□□ -2.14
RNU6-553P-201ENST00000364047 ZNF816-ZNF321PA0A0X1KG74 233 aa1.69□□□□□ -2.14
RNU6-553P-201ENST00000364047 OR8U9P0C7N5 309 aa1.69□□□□□ -2.14
RNU6-553P-201ENST00000364047 OR5H8P0DN80 308 aa1.69□□□□□ -2.14
RNU6-553P-201ENST00000364047 F2RP25116 425 aa1.69□□□□□ -2.14
RNU6-553P-201ENST00000364047 CEACAM3P40198 252 aa1.69□□□□□ -2.14
RNU6-553P-201ENST00000364047 TNFSF9P41273 254 aa1.69□□□□□ -2.14
RNU6-553P-201ENST00000364047 GDI2P50395 445 aaKnown RBP1.69□□□□□ -2.14
RNU6-553P-201ENST00000364047 MXD1Q05195 221 aa1.69□□□□□ -2.14
RNU6-553P-201ENST00000364047 PDIK1LQ8N165 341 aa1.69□□□□□ -2.14
RNU6-553P-201ENST00000364047 LRRC75A-AS1Q8N1F1 130 aa1.69□□□□□ -2.14
RNU6-553P-201ENST00000364047 TMEM256Q8N2U0 113 aa1.69□□□□□ -2.14
RNU6-553P-201ENST00000364047 C1orf64Q8NEQ6 169 aa1.69□□□□□ -2.14
RNU6-553P-201ENST00000364047 PIBF1Q8WXW3 757 aa1.69□□□□□ -2.14
RNU6-553P-201ENST00000364047 CWH43Q9H720 699 aa1.69□□□□□ -2.14
RNU6-553P-201ENST00000364047 NT5MQ9NPB1 228 aa1.69□□□□□ -2.14
RNU6-553P-201ENST00000364047 TRMT112Q9UI30 125 aaKnown RBP1.69□□□□□ -2.14
RNU6-553P-201ENST00000364047 ING4Q9UNL4 249 aa1.69□□□□□ -2.14
RNU6-553P-201ENST00000364047 ST3GAL6Q9Y274 331 aa1.69□□□□□ -2.14
RNU6-553P-201ENST00000364047 CBY1Q9Y3M2 126 aa1.69□□□□□ -2.14
RNU6-553P-201ENST00000364047 CNTNAP1P78357 1384 aa1.69□□□□□ -2.14
RNU6-553P-201ENST00000364047 C5orf63A6NC05 138 aa1.68□□□□□ -2.14
RNU6-553P-201ENST00000364047 BTBD17A6NE02 478 aa1.68□□□□□ -2.14
RNU6-553P-201ENST00000364047 MRPS12O15235 138 aaKnown RBP1.68□□□□□ -2.14
RNU6-553P-201ENST00000364047 CHST10O43529 356 aa1.68□□□□□ -2.14
RNU6-553P-201ENST00000364047 TMEM50AO95807 157 aa1.68□□□□□ -2.14
RNU6-553P-201ENST00000364047 CD3GP09693 182 aa1.68□□□□□ -2.14
RNU6-553P-201ENST00000364047 ETS2P15036 469 aa1.68□□□□□ -2.14
RNU6-553P-201ENST00000364047 WARSP23381 471 aaKnown RBP1.68□□□□□ -2.14
RNU6-553P-201ENST00000364047 IFNA8P32881 189 aa1.68□□□□□ -2.14
RNU6-553P-201ENST00000364047 SEC61GP60059 68 aa1.68□□□□□ -2.14
RNU6-553P-201ENST00000364047 YWHAGP61981 247 aaKnown RBP eCLIP1.68□□□□□ -2.14
RNU6-553P-201ENST00000364047 TGIF2LXQ8IUE1 241 aa1.68□□□□□ -2.14
RNU6-553P-201ENST00000364047 APCDD1LQ8NCL9 501 aa1.68□□□□□ -2.14
RNU6-553P-201ENST00000364047 SDR9C7Q8NEX9 313 aa1.68□□□□□ -2.14
RNU6-553P-201ENST00000364047 OR5M1Q8NGP8 315 aa1.68□□□□□ -2.14
RNU6-553P-201ENST00000364047 GALNT14Q96FL9 552 aa1.68□□□□□ -2.14
RNU6-553P-201ENST00000364047 AHDC1Q5TGY3 1603 aaPredicted RBP1.68□□□□□ -2.14
RNU6-553P-201ENST00000364047 MAPK8IP3Q9UPT6 1336 aa1.67□□□□□ -2.14
RNU6-553P-201ENST00000364047 C15orf38-AP3S2A0A0A6YYH1 394 aa1.67□□□□□ -2.14
RNU6-553P-201ENST00000364047 A0A1W2PNN7 141 aa1.67□□□□□ -2.14
RNU6-553P-201ENST00000364047 A0A1W2PPE3 182 aa1.67□□□□□ -2.14
RNU6-553P-201ENST00000364047 TMEM120BA0PK00 339 aa1.67□□□□□ -2.14
RNU6-553P-201ENST00000364047 OR6C74A6NCV1 312 aa1.67□□□□□ -2.14
RNU6-553P-201ENST00000364047 BTNL10A8MVZ5 291 aa1.67□□□□□ -2.14
RNU6-553P-201ENST00000364047 EEDO75530 441 aaKnown RBP1.67□□□□□ -2.14
RNU6-553P-201ENST00000364047 REM1O75628 298 aa1.67□□□□□ -2.14
RNU6-553P-201ENST00000364047 LGALS3P17931 250 aaKnown RBP1.67□□□□□ -2.14
RNU6-553P-201ENST00000364047 ME2P23368 584 aa1.67□□□□□ -2.14
RNU6-553P-201ENST00000364047 TAS2R31P59538 309 aa1.67□□□□□ -2.14
RNU6-553P-201ENST00000364047 RPS11P62280 158 aaKnown RBP eCLIP1.67□□□□□ -2.14
RNU6-553P-201ENST00000364047 KCNJ2P63252 427 aa1.67□□□□□ -2.14
RNU6-553P-201ENST00000364047 CRADDP78560 199 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms