RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 LYPD2Q6UXB3 125 aa3.32□□□□□ -1.88
RPL39-201ENST00000361575 TMEM179Q6ZVK1 233 aa3.32□□□□□ -1.88
RPL39-201ENST00000361575 PEX26Q7Z412 305 aa3.32□□□□□ -1.88
RPL39-201ENST00000361575 CMTM8Q8IZV2 173 aa3.32□□□□□ -1.88
RPL39-201ENST00000361575 FAM71E2Q8N5Q1 922 aa3.32□□□□□ -1.88
RPL39-201ENST00000361575 OR2A1Q8NGT9 310 aa3.32□□□□□ -1.88
RPL39-201ENST00000361575 OR10J6PQ8NGY7 276 aa3.32□□□□□ -1.88
RPL39-201ENST00000361575 CT45A3Q8NHU0 189 aa3.32□□□□□ -1.88
RPL39-201ENST00000361575 CERS2Q96G23 380 aa3.32□□□□□ -1.88
RPL39-201ENST00000361575 RNF185Q96GF1 192 aa3.32□□□□□ -1.88
RPL39-201ENST00000361575 TMEM9BQ9NQ34 198 aa3.32□□□□□ -1.88
RPL39-201ENST00000361575 LRP4O75096 1905 aa3.32□□□□□ -1.88
RPL39-201ENST00000361575 NFASCO94856 1347 aa3.31□□□□□ -1.88
RPL39-201ENST00000361575 LYRM9A8MSI8 78 aa3.31□□□□□ -1.88
RPL39-201ENST00000361575 H3BNH8 94 aa3.31□□□□□ -1.88
RPL39-201ENST00000361575 BGLAPP02818 100 aa3.31□□□□□ -1.88
RPL39-201ENST00000361575 SMIM10L1P0DMW3 83 aa3.31□□□□□ -1.88
RPL39-201ENST00000361575 PRKACAP17612 351 aa3.31□□□□□ -1.88
RPL39-201ENST00000361575 ZNF138P52744 262 aa3.31□□□□□ -1.88
RPL39-201ENST00000361575 SLC7A9P82251 487 aa3.31□□□□□ -1.88
RPL39-201ENST00000361575 DNAJC3Q13217 504 aa3.31□□□□□ -1.88
RPL39-201ENST00000361575 GABRA6Q16445 453 aa3.31□□□□□ -1.88
RPL39-201ENST00000361575 TRMT5Q32P41 509 aaKnown RBP3.31□□□□□ -1.88
RPL39-201ENST00000361575 ANKRD22Q5VYY1 191 aa3.31□□□□□ -1.88
RPL39-201ENST00000361575 TEX43Q6ZNM6 134 aa3.31□□□□□ -1.88
RPL39-201ENST00000361575 TMEM150AQ86TG1 271 aa3.31□□□□□ -1.88
RPL39-201ENST00000361575 LINC00523Q86TU6 105 aa3.31□□□□□ -1.88
RPL39-201ENST00000361575 C11orf53Q8IXP5 236 aa3.31□□□□□ -1.88
RPL39-201ENST00000361575 MCOLN3Q8TDD5 553 aa3.31□□□□□ -1.88
RPL39-201ENST00000361575 ACTRT1Q8TDG2 376 aa3.31□□□□□ -1.88
RPL39-201ENST00000361575 TMEM158Q8WZ71 300 aa3.31□□□□□ -1.88
RPL39-201ENST00000361575 EEF1AKMT3Q96AZ1 226 aa3.31□□□□□ -1.88
RPL39-201ENST00000361575 FAM3DQ96BQ1 224 aa3.31□□□□□ -1.88
RPL39-201ENST00000361575 SMIM10Q96HG1 83 aa3.31□□□□□ -1.88
RPL39-201ENST00000361575 JSRP1Q96MG2 331 aaPredicted RBP3.31□□□□□ -1.88
RPL39-201ENST00000361575 TSSK3Q96PN8 268 aa3.31□□□□□ -1.88
RPL39-201ENST00000361575 NRTNQ99748 197 aa3.31□□□□□ -1.88
RPL39-201ENST00000361575 CLN6Q9NWW5 311 aa3.31□□□□□ -1.88
RPL39-201ENST00000361575 DEC1Q9P2X7 70 aa3.31□□□□□ -1.88
RPL39-201ENST00000361575 NEURL4Q96JN8 1562 aa3.3□□□□□ -1.88
RPL39-201ENST00000361575 PDS5BQ9NTI5 1447 aa3.3□□□□□ -1.88
RPL39-201ENST00000361575 CENPJQ9HC77 1338 aaPredicted RBP3.3□□□□□ -1.88
RPL39-201ENST00000361575 MAPK8IP3Q9UPT6 1336 aa3.3□□□□□ -1.88
RPL39-201ENST00000361575 ZNF701M0R085 212 aaPredicted RBP3.3□□□□□ -1.88
RPL39-201ENST00000361575 KMOO15229 486 aa3.3□□□□□ -1.88
RPL39-201ENST00000361575 CD5LO43866 347 aa3.3□□□□□ -1.88
RPL39-201ENST00000361575 FGFR1OPO95684 399 aaKnown RBP3.3□□□□□ -1.88
RPL39-201ENST00000361575 HBE1P02100 147 aa3.3□□□□□ -1.88
RPL39-201ENST00000361575 ARG1P05089 322 aa3.3□□□□□ -1.88
RPL39-201ENST00000361575 PLEKP08567 350 aaPredicted RBP3.3□□□□□ -1.88
RPL39-201ENST00000361575 OR5H8P0DN80 308 aa3.3□□□□□ -1.88
RPL39-201ENST00000361575 CSNK2A2P19784 350 aaPredicted RBP3.3□□□□□ -1.88
RPL39-201ENST00000361575 MSR1P21757 451 aa3.3□□□□□ -1.88
RPL39-201ENST00000361575 SLC26A3P40879 764 aa3.3□□□□□ -1.88
RPL39-201ENST00000361575 TNFSF9P41273 254 aa3.3□□□□□ -1.88
RPL39-201ENST00000361575 KRTAP10-6P60371 365 aaPredicted RBP3.3□□□□□ -1.88
RPL39-201ENST00000361575 CKAP4Q07065 602 aaKnown RBP3.3□□□□□ -1.88
RPL39-201ENST00000361575 NCF4Q15080 339 aa3.3□□□□□ -1.88
RPL39-201ENST00000361575 PSMD5Q16401 504 aa3.3□□□□□ -1.88
RPL39-201ENST00000361575 TTLL9Q3SXZ7 439 aa3.3□□□□□ -1.88
RPL39-201ENST00000361575 COA6Q5JTJ3 125 aaKnown RBP3.3□□□□□ -1.88
RPL39-201ENST00000361575 ZNF493Q6ZR52 646 aa3.3□□□□□ -1.88
RPL39-201ENST00000361575 MRPL21Q7Z2W9 205 aaKnown RBP3.3□□□□□ -1.88
RPL39-201ENST00000361575 SPAG16Q8N0X2 631 aa3.3□□□□□ -1.88
RPL39-201ENST00000361575 ARRDC1Q8N5I2 433 aa3.3□□□□□ -1.88
RPL39-201ENST00000361575 CA5BP1Q8WTZ4 195 aa3.3□□□□□ -1.88
RPL39-201ENST00000361575 NAT6Q93015 286 aa3.3□□□□□ -1.88
RPL39-201ENST00000361575 IL22Q9GZX6 179 aa3.3□□□□□ -1.88
RPL39-201ENST00000361575 MYOZ2Q9NPC6 264 aa3.3□□□□□ -1.88
RPL39-201ENST00000361575 DMAP1Q9NPF5 467 aaPredicted RBP3.3□□□□□ -1.88
RPL39-201ENST00000361575 ZNF226Q9NYT6 803 aa3.3□□□□□ -1.88
RPL39-201ENST00000361575 ZNF629Q9UEG4 869 aaPredicted RBP3.3□□□□□ -1.88
RPL39-201ENST00000361575 PSG8Q9UQ74 426 aa3.3□□□□□ -1.88
RPL39-201ENST00000361575 CIB4A0PJX0 185 aa3.29□□□□□ -1.88
RPL39-201ENST00000361575 SERPINE3A8MV23 424 aa3.29□□□□□ -1.88
RPL39-201ENST00000361575 XKRYO14609 159 aa3.29□□□□□ -1.88
RPL39-201ENST00000361575 RAD51CO43502 376 aa3.29□□□□□ -1.88
RPL39-201ENST00000361575 SNAI1O95863 264 aaPredicted RBP3.29□□□□□ -1.88
RPL39-201ENST00000361575 CALM1P0DP23 149 aa3.29□□□□□ -1.88
RPL39-201ENST00000361575 CALM2P0DP24 149 aa3.29□□□□□ -1.88
RPL39-201ENST00000361575 CALM3P0DP25 149 aa3.29□□□□□ -1.88
RPL39-201ENST00000361575 U2AF2P26368 475 aaKnown RBP eCLIP3.29□□□□□ -1.88
RPL39-201ENST00000361575 CFHR2P36980 270 aa3.29□□□□□ -1.88
RPL39-201ENST00000361575 LHX2P50458 406 aa3.29□□□□□ -1.88
RPL39-201ENST00000361575 FAM83EQ2M2I3 478 aa3.29□□□□□ -1.88
RPL39-201ENST00000361575 TMEM255AQ5JRV8 349 aa3.29□□□□□ -1.88
RPL39-201ENST00000361575 CCNJQ5T5M9 372 aa3.29□□□□□ -1.88
RPL39-201ENST00000361575 UBE2UQ5VVX9 321 aa3.29□□□□□ -1.88
RPL39-201ENST00000361575 H3F3CQ6NXT2 135 aa3.29□□□□□ -1.88
RPL39-201ENST00000361575 DNAJC24Q6P3W2 148 aa3.29□□□□□ -1.88
RPL39-201ENST00000361575 ASCL4Q6XD76 172 aa3.29□□□□□ -1.88
RPL39-201ENST00000361575 STRADAQ7RTN6 431 aa3.29□□□□□ -1.88
RPL39-201ENST00000361575 VTCN1Q7Z7D3 282 aa3.29□□□□□ -1.88
RPL39-201ENST00000361575 MREGQ8N565 214 aa3.29□□□□□ -1.88
RPL39-201ENST00000361575 OR51F2Q8NH61 342 aa3.29□□□□□ -1.88
RPL39-201ENST00000361575 IL22RA2Q969J5 263 aa3.29□□□□□ -1.88
RPL39-201ENST00000361575 PIGUQ9H490 435 aa3.29□□□□□ -1.88
RPL39-201ENST00000361575 CHRAC1Q9NRG0 131 aa3.29□□□□□ -1.88
RPL39-201ENST00000361575 PCYOX1Q9UHG3 505 aa3.29□□□□□ -1.88
RPL39-201ENST00000361575 YARS2Q9Y2Z4 477 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms