RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 RBM34P42696 430 aaKnown RBP17.8■□□□□ 0.44
CD47-202ENST00000361309 CRYBA2P53672 197 aa17.8■□□□□ 0.44
CD47-202ENST00000361309 SEC61A1P61619 476 aaKnown RBP17.8■□□□□ 0.44
CD47-202ENST00000361309 BAMBIQ13145 260 aa17.8■□□□□ 0.44
CD47-202ENST00000361309 LAPTM4AQ15012 233 aa17.8■□□□□ 0.44
CD47-202ENST00000361309 ZMAT1Q5H9K5 638 aa17.8■□□□□ 0.44
CD47-202ENST00000361309 MTX3Q5HYI7 312 aa17.8■□□□□ 0.44
CD47-202ENST00000361309 ALDH16A1Q8IZ83 802 aa17.8■□□□□ 0.44
CD47-202ENST00000361309 OR10A6Q8NH74 314 aa17.8■□□□□ 0.44
CD47-202ENST00000361309 ZMAT3Q9HA38 289 aaKnown RBP17.8■□□□□ 0.44
CD47-202ENST00000361309 PATZ1Q9HBE1 687 aaKnown RBP17.8■□□□□ 0.44
CD47-202ENST00000361309 TMEM106BQ9NUM4 274 aa17.8■□□□□ 0.44
CD47-202ENST00000361309 POLR3KQ9Y2Y1 108 aaPredicted RBP17.8■□□□□ 0.44
CD47-202ENST00000361309 VWFP04275 2813 aa17.79■□□□□ 0.44
CD47-202ENST00000361309 TIMM8AO60220 97 aaPredicted RBP17.79■□□□□ 0.44
CD47-202ENST00000361309 ICMTO60725 284 aa17.79■□□□□ 0.44
CD47-202ENST00000361309 ZNF12P17014 697 aa17.79■□□□□ 0.44
CD47-202ENST00000361309 LAP3P28838 519 aa17.79■□□□□ 0.44
CD47-202ENST00000361309 ARHGDIAP52565 204 aa17.79■□□□□ 0.44
CD47-202ENST00000361309 TAS2R41P59536 307 aa17.79■□□□□ 0.44
CD47-202ENST00000361309 DEFA6Q01524 100 aa17.79■□□□□ 0.44
CD47-202ENST00000361309 PSG7Q13046 419 aa17.79■□□□□ 0.44
CD47-202ENST00000361309 CDK5R2Q13319 367 aa17.79■□□□□ 0.44
CD47-202ENST00000361309 TAF11Q15544 211 aa17.79■□□□□ 0.44
CD47-202ENST00000361309 PDLIM3Q53GG5 364 aaPredicted RBP17.79■□□□□ 0.44
CD47-202ENST00000361309 INTS11Q5TA45 600 aaKnown RBP17.79■□□□□ 0.44
CD47-202ENST00000361309 ZNF774Q6NX45 483 aa17.79■□□□□ 0.44
CD47-202ENST00000361309 TREML4Q6UXN2 200 aa17.79■□□□□ 0.44
CD47-202ENST00000361309 KLHL36Q8N4N3 616 aa17.79■□□□□ 0.44
CD47-202ENST00000361309 SPICQ8N5J4 248 aa17.79■□□□□ 0.44
CD47-202ENST00000361309 TMEM239Q8WW34 195 aa17.79■□□□□ 0.44
CD47-202ENST00000361309 RASSF5Q8WWW0 418 aa17.79■□□□□ 0.44
CD47-202ENST00000361309 C4orf45Q96LM5 186 aa17.79■□□□□ 0.44
CD47-202ENST00000361309 TXNIPQ9H3M7 391 aa17.79■□□□□ 0.44
CD47-202ENST00000361309 RABEP2Q9H5N1 569 aa17.79■□□□□ 0.44
CD47-202ENST00000361309 ELOVL3Q9HB03 270 aa17.79■□□□□ 0.44
CD47-202ENST00000361309 SH3GLB1Q9Y371 365 aa17.79■□□□□ 0.44
CD47-202ENST00000361309 TIMM10BQ9Y5J6 103 aa17.79■□□□□ 0.44
CD47-202ENST00000361309 INSIG2Q9Y5U4 225 aa17.79■□□□□ 0.44
CD47-202ENST00000361309 GMNCA6NCL1 334 aa17.78■□□□□ 0.44
CD47-202ENST00000361309 NPIPB13A6NJU9 1138 aa17.78■□□□□ 0.44
CD47-202ENST00000361309 NPIPB4C9JG80 1138 aa17.78■□□□□ 0.44
CD47-202ENST00000361309 ANGPT2O15123 496 aa17.78■□□□□ 0.44
CD47-202ENST00000361309 SHOX2O60902 331 aaPredicted RBP17.78■□□□□ 0.44
CD47-202ENST00000361309 IGF2P01344 180 aa17.78■□□□□ 0.44
CD47-202ENST00000361309 CST2P09228 141 aa17.78■□□□□ 0.44
CD47-202ENST00000361309 NR2C1P13056 603 aa17.78■□□□□ 0.44
CD47-202ENST00000361309 TNFRSF1BP20333 461 aa17.78■□□□□ 0.44
CD47-202ENST00000361309 SLC6A9P48067 706 aa17.78■□□□□ 0.44
CD47-202ENST00000361309 TOP3AQ13472 1001 aaPredicted RBP17.78■□□□□ 0.44
CD47-202ENST00000361309 VMACQ2NL98 169 aa17.78■□□□□ 0.44
CD47-202ENST00000361309 TMEM155Q4W5P6 130 aa17.78■□□□□ 0.44
CD47-202ENST00000361309 ZNF283Q8N7M2 679 aa17.78■□□□□ 0.44
CD47-202ENST00000361309 CLDN22Q8N7P3 220 aa17.78■□□□□ 0.44
CD47-202ENST00000361309 LIPHQ8WWY8 451 aa17.78■□□□□ 0.44
CD47-202ENST00000361309 MRI1Q9BV20 369 aa17.78■□□□□ 0.44
CD47-202ENST00000361309 RIMS3Q9UJD0 308 aa17.78■□□□□ 0.44
CD47-202ENST00000361309 CMYA5Q8N3K9 4069 aa17.77■□□□□ 0.44
CD47-202ENST00000361309 RNASE1P07998 156 aaKnown RBP17.77■□□□□ 0.44
CD47-202ENST00000361309 GZMMP51124 257 aa17.77■□□□□ 0.44
CD47-202ENST00000361309 PCBD1P61457 104 aa17.77■□□□□ 0.44
CD47-202ENST00000361309 NFYCQ13952 458 aa17.77■□□□□ 0.44
CD47-202ENST00000361309 CCDC80Q76M96 950 aa17.77■□□□□ 0.44
CD47-202ENST00000361309 LRRC28Q86X40 367 aaPredicted RBP17.77■□□□□ 0.44
CD47-202ENST00000361309 TAF15Q92804 592 aaKnown RBP eCLIP17.77■□□□□ 0.44
CD47-202ENST00000361309 SAMD8Q96LT4 415 aa17.77■□□□□ 0.44
CD47-202ENST00000361309 RBP7Q96R05 134 aa17.77■□□□□ 0.44
CD47-202ENST00000361309 ALG12Q9BV10 488 aa17.77■□□□□ 0.44
CD47-202ENST00000361309 POFUT1Q9H488 388 aa17.77■□□□□ 0.44
CD47-202ENST00000361309 OR5F1O95221 314 aa17.76■□□□□ 0.43
CD47-202ENST00000361309 TNFSF4P23510 183 aa17.76■□□□□ 0.43
CD47-202ENST00000361309 BTG1P62324 171 aa17.76■□□□□ 0.43
CD47-202ENST00000361309 IL13RA1P78552 427 aa17.76■□□□□ 0.43
CD47-202ENST00000361309 PIN1Q13526 163 aaPredicted RBP17.76■□□□□ 0.43
CD47-202ENST00000361309 ZMYND11Q15326 602 aa17.76■□□□□ 0.43
CD47-202ENST00000361309 ALG10Q5BKT4 473 aa17.76■□□□□ 0.43
CD47-202ENST00000361309 ZER1Q7Z7L7 766 aa17.76■□□□□ 0.43
CD47-202ENST00000361309 OR2Z1Q8NG97 314 aa17.76■□□□□ 0.43
CD47-202ENST00000361309 SLC25A28Q96A46 364 aa17.76■□□□□ 0.43
CD47-202ENST00000361309 MS4A7Q9GZW8 240 aaPredicted RBP17.76■□□□□ 0.43
CD47-202ENST00000361309 MED31Q9Y3C7 131 aa17.76■□□□□ 0.43
CD47-202ENST00000361309 A0A1W2PPL8 197 aa17.75■□□□□ 0.43
CD47-202ENST00000361309 POM121CA8CG34 1229 aa17.75■□□□□ 0.43
CD47-202ENST00000361309 A8MXK9 166 aa17.75■□□□□ 0.43
CD47-202ENST00000361309 F5H0A9 414 aaPredicted RBP17.75■□□□□ 0.43
CD47-202ENST00000361309 PIP5K1CO60331 668 aa17.75■□□□□ 0.43
CD47-202ENST00000361309 ABHD16AO95870 558 aa17.75■□□□□ 0.43
CD47-202ENST00000361309 TNFRSF1AP19438 455 aa17.75■□□□□ 0.43
CD47-202ENST00000361309 GUCA1AP43080 201 aaPredicted RBP17.75■□□□□ 0.43
CD47-202ENST00000361309 RPL27P61353 136 aaKnown RBP17.75■□□□□ 0.43
CD47-202ENST00000361309 ENDOGQ14249 297 aaKnown RBP17.75■□□□□ 0.43
CD47-202ENST00000361309 SLC9A3R2Q15599 337 aa17.75■□□□□ 0.43
CD47-202ENST00000361309 ARL9Q6T311 187 aa17.75■□□□□ 0.43
CD47-202ENST00000361309 Q6ZR03 302 aa17.75■□□□□ 0.43
CD47-202ENST00000361309 FOXL2NBQ6ZUU3 175 aa17.75■□□□□ 0.43
CD47-202ENST00000361309 SIGLEC11Q96RL6 698 aa17.75■□□□□ 0.43
CD47-202ENST00000361309 POLR2J2Q9GZM3 115 aaKnown RBP17.75■□□□□ 0.43
CD47-202ENST00000361309 POLR2J3Q9H1A7 115 aaKnown RBP17.75■□□□□ 0.43
CD47-202ENST00000361309 HIF3AQ9Y2N7 669 aa17.75■□□□□ 0.43
CD47-202ENST00000361309 GSTM3P21266 225 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms