RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 SLC25A43Q8WUT9 341 aaPredicted RBP11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 GPR137Q96N19 417 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 SIGLEC12Q96PQ1 595 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 CITED4Q96RK1 184 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 POTEKPQ9BYX7 375 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 PLA2G3Q9NZ20 509 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 EMC3Q9P0I2 261 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 MGAT4AQ9UM21 535 aa11.79□□□□□ -0.52
SQSTM1-201ENST00000360718 ZNF891A8MT65 544 aaPredicted RBP11.78□□□□□ -0.52
SQSTM1-201ENST00000360718 TLX3O43711 291 aaPredicted RBP11.78□□□□□ -0.52
SQSTM1-201ENST00000360718 NEURL1O76050 574 aa11.78□□□□□ -0.52
SQSTM1-201ENST00000360718 ECDO95905 644 aaPredicted RBP11.78□□□□□ -0.52
SQSTM1-201ENST00000360718 UQCRC1P31930 480 aa11.78□□□□□ -0.52
SQSTM1-201ENST00000360718 DIO1P49895 249 aa11.78□□□□□ -0.52
SQSTM1-201ENST00000360718 SOX8P57073 446 aa11.78□□□□□ -0.52
SQSTM1-201ENST00000360718 CEP78Q5JTW2 689 aa11.78□□□□□ -0.52
SQSTM1-201ENST00000360718 FAM209AQ5JX71 171 aa11.78□□□□□ -0.52
SQSTM1-201ENST00000360718 UNQ9370/PRO34162Q6UXP9 181 aa11.78□□□□□ -0.52
SQSTM1-201ENST00000360718 FGD2Q7Z6J4 655 aa11.78□□□□□ -0.52
SQSTM1-201ENST00000360718 FAM109AQ8N4B1 249 aa11.78□□□□□ -0.52
SQSTM1-201ENST00000360718 OR13C5Q8NGS8 318 aa11.78□□□□□ -0.52
SQSTM1-201ENST00000360718 MOSPD2Q8NHP6 518 aa11.78□□□□□ -0.52
SQSTM1-201ENST00000360718 MFSD8Q8NHS3 518 aa11.78□□□□□ -0.52
SQSTM1-201ENST00000360718 GPX7Q96SL4 187 aaPredicted RBP11.78□□□□□ -0.52
SQSTM1-201ENST00000360718 MRI1Q9BV20 369 aa11.78□□□□□ -0.52
SQSTM1-201ENST00000360718 PTDSS2Q9BVG9 487 aa11.78□□□□□ -0.52
SQSTM1-201ENST00000360718 GNG8Q9UK08 70 aa11.78□□□□□ -0.52
SQSTM1-201ENST00000360718 CLEC4AQ9UMR7 237 aa11.78□□□□□ -0.52
SQSTM1-201ENST00000360718 PINLYPA6NC86 204 aa11.77□□□□□ -0.52
SQSTM1-201ENST00000360718 H3BML4 177 aa11.77□□□□□ -0.52
SQSTM1-201ENST00000360718 ARPC3O15145 178 aa11.77□□□□□ -0.52
SQSTM1-201ENST00000360718 TSC22D2O75157 780 aa11.77□□□□□ -0.52
SQSTM1-201ENST00000360718 WDPCPO95876 746 aa11.77□□□□□ -0.52
SQSTM1-201ENST00000360718 TFP02787 698 aa11.77□□□□□ -0.52
SQSTM1-201ENST00000360718 CD14P08571 375 aa11.77□□□□□ -0.52
SQSTM1-201ENST00000360718 P2RX3P56373 397 aa11.77□□□□□ -0.52
SQSTM1-201ENST00000360718 AP3S2P59780 193 aa11.77□□□□□ -0.52
SQSTM1-201ENST00000360718 GPR85P60893 370 aa11.77□□□□□ -0.52
SQSTM1-201ENST00000360718 DGCR2P98153 550 aa11.77□□□□□ -0.52
SQSTM1-201ENST00000360718 RPL18Q07020 188 aaKnown RBP11.77□□□□□ -0.52
SQSTM1-201ENST00000360718 OR1C1Q15619 314 aa11.77□□□□□ -0.52
SQSTM1-201ENST00000360718 SGCBQ16585 318 aa11.77□□□□□ -0.52
SQSTM1-201ENST00000360718 SLC6A19Q695T7 634 aa11.77□□□□□ -0.52
SQSTM1-201ENST00000360718 GTPBP8Q8N3Z3 284 aaPredicted RBP11.77□□□□□ -0.52
SQSTM1-201ENST00000360718 OR11H7Q8NGC8 314 aa11.77□□□□□ -0.52
SQSTM1-201ENST00000360718 SMIM4Q8WVI0 70 aa11.77□□□□□ -0.52
SQSTM1-201ENST00000360718 HSD17B8Q92506 261 aa11.77□□□□□ -0.52
SQSTM1-201ENST00000360718 HES7Q9BYE0 225 aa11.77□□□□□ -0.52
SQSTM1-201ENST00000360718 BOKQ9UMX3 212 aaPredicted RBP11.77□□□□□ -0.52
SQSTM1-201ENST00000360718 AK6Q9Y3D8 172 aaKnown RBP11.77□□□□□ -0.52
SQSTM1-201ENST00000360718 A0A1W2PPK0 400 aa11.77□□□□□ -0.53
SQSTM1-201ENST00000360718 NAP1L6A6NFF2 107 aa11.77□□□□□ -0.53
SQSTM1-201ENST00000360718 APEHP13798 732 aaKnown RBP11.77□□□□□ -0.53
SQSTM1-201ENST00000360718 SRMP19623 302 aa11.77□□□□□ -0.53
SQSTM1-201ENST00000360718 GRPRP30550 384 aa11.77□□□□□ -0.53
SQSTM1-201ENST00000360718 NAA10P41227 235 aaPredicted RBP11.77□□□□□ -0.53
SQSTM1-201ENST00000360718 HCCSP53701 268 aa11.77□□□□□ -0.53
SQSTM1-201ENST00000360718 CTXN1P60606 82 aa11.77□□□□□ -0.53
SQSTM1-201ENST00000360718 ERVK-25P63136 954 aa11.77□□□□□ -0.53
SQSTM1-201ENST00000360718 GSG1Q2KHT4 349 aa11.77□□□□□ -0.53
SQSTM1-201ENST00000360718 ESCO2Q56NI9 601 aa11.77□□□□□ -0.53
SQSTM1-201ENST00000360718 ZBTB37Q5TC79 503 aa11.77□□□□□ -0.53
SQSTM1-201ENST00000360718 RAET1LQ5VY80 246 aa11.77□□□□□ -0.53
SQSTM1-201ENST00000360718 ZNF248Q8NDW4 579 aa11.77□□□□□ -0.53
SQSTM1-201ENST00000360718 DACT3Q96B18 629 aaPredicted RBP11.77□□□□□ -0.53
SQSTM1-201ENST00000360718 GRHPRQ9UBQ7 328 aa11.77□□□□□ -0.53
SQSTM1-201ENST00000360718 SLC23A1Q9UHI7 598 aa11.77□□□□□ -0.53
SQSTM1-201ENST00000360718 RPH3AQ9Y2J0 694 aaPredicted RBP11.77□□□□□ -0.53
SQSTM1-201ENST00000360718 PRAF2O60831 178 aa11.76□□□□□ -0.53
SQSTM1-201ENST00000360718 SRD5A2P31213 254 aa11.76□□□□□ -0.53
SQSTM1-201ENST00000360718 PER3P56645 1201 aa11.76□□□□□ -0.53
SQSTM1-201ENST00000360718 OR7A5Q15622 319 aa11.76□□□□□ -0.53
SQSTM1-201ENST00000360718 RNASE12Q5GAN4 147 aaKnown RBP11.76□□□□□ -0.53
SQSTM1-201ENST00000360718 SIGIRRQ6IA17 410 aa11.76□□□□□ -0.53
SQSTM1-201ENST00000360718 ARL5BQ96KC2 179 aa11.76□□□□□ -0.53
SQSTM1-201ENST00000360718 OR14A2Q96R54 314 aa11.76□□□□□ -0.53
SQSTM1-201ENST00000360718 FAM173AQ9BQD7 235 aa11.76□□□□□ -0.53
SQSTM1-201ENST00000360718 TTTY10Q9BZA0 68 aa11.76□□□□□ -0.53
SQSTM1-201ENST00000360718 ZFP64Q9NPA5 681 aa11.76□□□□□ -0.53
SQSTM1-201ENST00000360718 ADAM18Q9Y3Q7 739 aa11.76□□□□□ -0.53
SQSTM1-201ENST00000360718 PCDHGA9Q9Y5G4 932 aaKnown RBP11.76□□□□□ -0.53
SQSTM1-201ENST00000360718 ALPK2Q86TB3 2170 aa11.76□□□□□ -0.53
SQSTM1-201ENST00000360718 ACACAQ13085 2346 aa11.76□□□□□ -0.53
SQSTM1-201ENST00000360718 MEIKINA0A087WXM9 373 aa11.76□□□□□ -0.53
SQSTM1-201ENST00000360718 OR5H15A6NDH6 313 aa11.76□□□□□ -0.53
SQSTM1-201ENST00000360718 LRRC3CA6NJW4 275 aa11.76□□□□□ -0.53
SQSTM1-201ENST00000360718 IMPA2O14732 288 aa11.76□□□□□ -0.53
SQSTM1-201ENST00000360718 SSNA1O43805 119 aa11.76□□□□□ -0.53
SQSTM1-201ENST00000360718 CRYZL1O95825 349 aa11.76□□□□□ -0.53
SQSTM1-201ENST00000360718 F13BP05160 661 aa11.76□□□□□ -0.53
SQSTM1-201ENST00000360718 TPOP07202 933 aa11.76□□□□□ -0.53
SQSTM1-201ENST00000360718 ZNF17P17021 662 aa11.76□□□□□ -0.53
SQSTM1-201ENST00000360718 RPS11P62280 158 aaKnown RBP eCLIP11.76□□□□□ -0.53
SQSTM1-201ENST00000360718 KLF9Q13886 244 aaPredicted RBP11.76□□□□□ -0.53
SQSTM1-201ENST00000360718 EMC4Q5J8M3 183 aa11.76□□□□□ -0.53
SQSTM1-201ENST00000360718 GPR139Q6DWJ6 353 aa11.76□□□□□ -0.53
SQSTM1-201ENST00000360718 JAZF1Q86VZ6 243 aa11.76□□□□□ -0.53
SQSTM1-201ENST00000360718 C15orf40Q8WUR7 153 aa11.76□□□□□ -0.53
SQSTM1-201ENST00000360718 KCNE4Q8WWG9 221 aa11.76□□□□□ -0.53
SQSTM1-201ENST00000360718 RADILQ96JH8 1075 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 318.2 ms