RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 CD37P11049 281 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 FABP4P15090 132 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 OR2G6Q5TZ20 316 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 ZNF468Q5VIY5 522 aaPredicted RBP8.56□□□□□ -1.04
VPS13A-203ENST00000360280 EIF4E3Q8N5X7 224 aaKnown RBP8.56□□□□□ -1.04
VPS13A-203ENST00000360280 OR2T6Q8NHC8 308 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 SLC2A9Q9NRM0 540 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 SCN3AQ9NY46 2000 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 IGSF21Q96ID5 467 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 FLVCR1Q9Y5Y0 555 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 M0QYG6 137 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 RPL12P30050 165 aaKnown RBP8.56□□□□□ -1.04
VPS13A-203ENST00000360280 GGTA1PQ4G0N0 100 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 FAM26DQ5JW98 314 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 UBQLN3Q9H347 655 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 ARID1AO14497 2285 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 PRAMEF25A6NGN4 478 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 CSF2RAP15509 400 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 C17orf67Q0P5P2 114 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 DOC2BQ14184 412 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 EXOSC7Q15024 291 aaKnown RBP8.56□□□□□ -1.04
VPS13A-203ENST00000360280 PRAMEF5Q5TYX0 476 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 PRAMEF6Q5VXH4 476 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 OR10G3Q8NGC4 313 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 OR5K2Q8NHB8 316 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 TRAV36DV7A0A075B6V5 113 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 ZNF320A2RRD8 509 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 GATCO43716 136 aaKnown RBP8.56□□□□□ -1.04
VPS13A-203ENST00000360280 C1orf105O95561 183 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 FCGR2CP31995 323 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 BCL6P41182 706 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 CPEB1Q9BZB8 566 aaKnown RBP8.56□□□□□ -1.04
VPS13A-203ENST00000360280 ZNF17P17021 662 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 SLC10A2Q12908 348 aaPredicted RBP8.56□□□□□ -1.04
VPS13A-203ENST00000360280 PRR27Q6MZM9 219 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 ZNF761Q86XN6 746 aaPredicted RBP8.56□□□□□ -1.04
VPS13A-203ENST00000360280 SCCPDHQ8NBX0 429 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 OR10P1Q8NGE3 313 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 SLC38A5Q8WUX1 472 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 OR2A14Q96R47 310 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 FAAP24Q9BTP7 215 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 AAMDCQ9H7C9 122 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 HOXD13P35453 343 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 AGFG1P52594 562 aaKnown RBP8.56□□□□□ -1.04
VPS13A-203ENST00000360280 VHLLQ6RSH7 139 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 PLXDC2Q6UX71 529 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 TSEN54Q7Z6J9 526 aaKnown RBP8.56□□□□□ -1.04
VPS13A-203ENST00000360280 ATP13A2Q9NQ11 1180 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 RNASEK-C17orf49H0YIS7 233 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 MT-ATP6P00846 226 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 GPR75O95800 540 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 TPOP07202 933 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 GCAP28676 217 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 TMEM88Q6PEY1 159 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 PARP12Q9H0J9 701 aaKnown RBP8.56□□□□□ -1.04
VPS13A-203ENST00000360280 POLDIP2Q9Y2S7 368 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 ZNF840PA6NDX5 716 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 ZC3H3Q8IXZ2 948 aaKnown RBP8.56□□□□□ -1.04
VPS13A-203ENST00000360280 TRPM6Q9BX84 2022 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 BET1LQ9NYM9 111 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 CER1O95813 267 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 POU3F3P20264 500 aaPredicted RBP8.56□□□□□ -1.04
VPS13A-203ENST00000360280 DAPP51397 102 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 ZNF528Q3MIS6 628 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 FAM174AQ8TBP5 190 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 CKAP5Q14008 2032 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 SNRPGP15A8MWD9 76 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 SFTA3P0C7M3 94 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 ALOX5APP20292 161 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 FOXA1P55317 472 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 C18orf21Q32NC0 220 aaPredicted RBP8.56□□□□□ -1.04
VPS13A-203ENST00000360280 NAT6Q93015 286 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 IGSF8Q969P0 613 aa8.56□□□□□ -1.04
VPS13A-203ENST00000360280 ISG20Q96AZ6 181 aaKnown RBP8.56□□□□□ -1.04
VPS13A-203ENST00000360280 PMCHP20382 165 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 ARSDP51689 593 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 BCL2L2Q92843 193 aaPredicted RBP8.55□□□□□ -1.04
VPS13A-203ENST00000360280 RTL8AQ9BWD3 113 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 GLCEO94923 617 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 UBAC2Q8NBM4 344 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 SOD1P00441 154 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 KCNJ3P48549 501 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 LEXMQ3ZCV2 418 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 LGI1O95970 557 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 ZP2Q05996 745 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 SMN1Q16637 294 aaKnown RBP8.55□□□□□ -1.04
VPS13A-203ENST00000360280 DTWD2Q8NBA8 298 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 COMMD5Q9GZQ3 224 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 NR0B2Q15466 257 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 ANGPTL5Q86XS5 388 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 GPX8Q8TED1 209 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 PINX1Q96BK5 328 aaKnown RBP8.55□□□□□ -1.04
VPS13A-203ENST00000360280 CCDC187A0A096LP49 1063 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 A0A1B0GUH1 482 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 AKR1C3P42330 323 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 KCNJ10P78508 379 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 B3GNTL1Q67FW5 361 aaPredicted RBP8.55□□□□□ -1.04
VPS13A-203ENST00000360280 RPL3LQ92901 407 aaKnown RBP8.55□□□□□ -1.04
VPS13A-203ENST00000360280 TIMD4Q96H15 378 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 JAM3Q9BX67 310 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms