RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 DEFB103AP81534 67 aa14.71□□□□□ -0.05
COL18A1-203ENST00000359759 DCDP81605 110 aaKnown RBP14.71□□□□□ -0.05
COL18A1-203ENST00000359759 CORO6Q6QEF8 472 aa14.71□□□□□ -0.05
COL18A1-203ENST00000359759 PGBD5Q8N414 524 aa14.71□□□□□ -0.05
COL18A1-203ENST00000359759 SEMA6DQ8NFY4 1073 aa14.71□□□□□ -0.05
COL18A1-203ENST00000359759 TEX37Q96LM6 180 aa14.71□□□□□ -0.05
COL18A1-203ENST00000359759 CDCP1Q9H5V8 836 aa14.71□□□□□ -0.05
COL18A1-203ENST00000359759 ZNF629Q9UEG4 869 aaPredicted RBP14.71□□□□□ -0.05
COL18A1-203ENST00000359759 CHRNA9Q9UGM1 479 aa14.71□□□□□ -0.05
COL18A1-203ENST00000359759 H7BYZ3 331 aa14.71□□□□□ -0.05
COL18A1-203ENST00000359759 SIRPB1O00241 398 aa14.71□□□□□ -0.05
COL18A1-203ENST00000359759 SDCBPO00560 298 aaPredicted RBP14.71□□□□□ -0.05
COL18A1-203ENST00000359759 TAPBPO15533 448 aa14.71□□□□□ -0.05
COL18A1-203ENST00000359759 TNFRSF4P43489 277 aa14.71□□□□□ -0.05
COL18A1-203ENST00000359759 FGF13Q92913 245 aa14.71□□□□□ -0.05
COL18A1-203ENST00000359759 OR51I2Q9H344 312 aa14.71□□□□□ -0.05
COL18A1-203ENST00000359759 PHRF1Q9P1Y6 1649 aaKnown RBP14.71□□□□□ -0.05
COL18A1-203ENST00000359759 ANKRD12Q6UB98 2062 aa14.71□□□□□ -0.05
COL18A1-203ENST00000359759 CER1O95813 267 aa14.71□□□□□ -0.05
COL18A1-203ENST00000359759 EDN1P05305 212 aa14.71□□□□□ -0.05
COL18A1-203ENST00000359759 PRSS35Q8N3Z0 413 aa14.71□□□□□ -0.05
COL18A1-203ENST00000359759 NKAIN3Q8N8D7 197 aa14.71□□□□□ -0.05
COL18A1-203ENST00000359759 AKR1E2Q96JD6 320 aa14.71□□□□□ -0.05
COL18A1-203ENST00000359759 LOC102724200A0A096LPH7 203 aaPredicted RBP14.71□□□□□ -0.05
COL18A1-203ENST00000359759 BTBD17A6NE02 478 aa14.71□□□□□ -0.05
COL18A1-203ENST00000359759 SLC25A6P12236 298 aa14.71□□□□□ -0.05
COL18A1-203ENST00000359759 PI3P19957 117 aa14.71□□□□□ -0.05
COL18A1-203ENST00000359759 ARRDC2Q8TBH0 407 aa14.71□□□□□ -0.05
COL18A1-203ENST00000359759 SLC25A46Q96AG3 418 aa14.71□□□□□ -0.05
COL18A1-203ENST00000359759 TIMP1P01033 207 aa14.71□□□□□ -0.06
COL18A1-203ENST00000359759 HOXD9P28356 352 aaPredicted RBP14.71□□□□□ -0.06
COL18A1-203ENST00000359759 RPUSD3Q6P087 351 aaKnown RBP14.71□□□□□ -0.06
COL18A1-203ENST00000359759 RXFP4Q8TDU9 374 aa14.71□□□□□ -0.06
COL18A1-203ENST00000359759 SLC22A11Q9NSA0 550 aa14.71□□□□□ -0.06
COL18A1-203ENST00000359759 GAR1Q9NY12 217 aaKnown RBP14.71□□□□□ -0.06
COL18A1-203ENST00000359759 ZNF727A8MUV8 499 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 ABCD4O14678 606 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 ACHEP22303 614 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 PCSK6P29122 969 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 MRPL19P49406 292 aaKnown RBP14.7□□□□□ -0.06
COL18A1-203ENST00000359759 BAMBIQ13145 260 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 OTPQ5XKR4 325 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 TMEM99Q8N816 258 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 OR6M1Q8NGM8 313 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 OR13C5Q8NGS8 318 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 OR51E1Q8TCB6 317 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 ARSGQ96EG1 525 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 RGS11O94810 467 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 RFX2P48378 723 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 OR8G1Q15617 311 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 L3MBTL4Q8NA19 623 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 APH1AQ96BI3 265 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 SLC35A4Q96G79 324 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 CTSFQ9UBX1 484 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 B3GALT5Q9Y2C3 310 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 DTYMKP23919 212 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 OR5I1Q13606 314 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 NANOGP1Q8N7R0 232 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 LFNGQ8NES3 379 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 GOT1L1Q8NHS2 421 aaPredicted RBP14.7□□□□□ -0.06
COL18A1-203ENST00000359759 FBXW5Q969U6 566 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 Q96M85 177 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 SPACA5Q96QH8 159 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 C12orf57Q99622 126 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 ADAM29Q9UKF5 820 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 TGOLN2O43493 480 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 CTNSO60931 367 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 CT45A10P0DMU9 189 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 BCL6P41182 706 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 RAB13P51153 203 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 ZNF687Q8N1G0 1237 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 IGKV6-21A0A0C4DH24 114 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 MMP11P24347 488 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 TEAD1P28347 426 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 GGTA1PQ4G0N0 100 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 MANEAQ5SRI9 462 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 PAQR6Q6TCH4 344 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 CSNK1EP49674 416 aaKnown RBP14.7□□□□□ -0.06
COL18A1-203ENST00000359759 REEP5Q00765 189 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 FABP9Q0Z7S8 132 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 TAZQ16635 292 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 OR10X1Q8NGY0 326 aa14.7□□□□□ -0.06
COL18A1-203ENST00000359759 BAK1Q16611 211 aa14.69□□□□□ -0.06
COL18A1-203ENST00000359759 NKAIN4Q8IVV8 208 aa14.69□□□□□ -0.06
COL18A1-203ENST00000359759 FLVCR1Q9Y5Y0 555 aa14.69□□□□□ -0.06
COL18A1-203ENST00000359759 ANKUB1A6NFN9 424 aa14.69□□□□□ -0.06
COL18A1-203ENST00000359759 ARPC3O15145 178 aa14.69□□□□□ -0.06
COL18A1-203ENST00000359759 CXCL12P48061 93 aa14.69□□□□□ -0.06
COL18A1-203ENST00000359759 MISPQ8IVT2 679 aa14.69□□□□□ -0.06
COL18A1-203ENST00000359759 H0YIV9 168 aa14.69□□□□□ -0.06
COL18A1-203ENST00000359759 LILRA3Q8N6C8 439 aaPredicted RBP14.69□□□□□ -0.06
COL18A1-203ENST00000359759 PDLIM5Q96HC4 596 aaKnown RBP14.69□□□□□ -0.06
COL18A1-203ENST00000359759 CCDC74BQ96LY2 380 aa14.69□□□□□ -0.06
COL18A1-203ENST00000359759 SLC25A21Q9BQT8 299 aaPredicted RBP14.69□□□□□ -0.06
COL18A1-203ENST00000359759 CBY1Q9Y3M2 126 aa14.69□□□□□ -0.06
COL18A1-203ENST00000359759 XRN1Q8IZH2 1706 aaKnown RBP14.69□□□□□ -0.06
COL18A1-203ENST00000359759 RFPL4AA6NLU0 287 aa14.69□□□□□ -0.06
COL18A1-203ENST00000359759 RFPL4AL1F8VTS6 287 aa14.69□□□□□ -0.06
COL18A1-203ENST00000359759 SOX15O60248 233 aa14.69□□□□□ -0.06
COL18A1-203ENST00000359759 OR7C2O60412 319 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms