RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 Q1RN00 199 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 MARCH8Q5T0T0 291 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 YOD1Q5VVQ6 348 aaPredicted RBP8.07□□□□□ -1.12
COL6A6-201ENST00000358511 OR5M10Q6IEU7 315 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 C11orf87Q6NUJ2 197 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 ADIPOR2Q86V24 386 aa8.07□□□□□ -1.12
COL6A6-201ENST00000358511 MRPL38Q96DV4 380 aaKnown RBP8.07□□□□□ -1.12
COL6A6-201ENST00000358511 MARF1Q9Y4F3 1742 aaKnown RBP8.06□□□□□ -1.12
COL6A6-201ENST00000358511 DRGXA6NNA5 263 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 C17orf105B2RV13 164 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 M0QZK8 103 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 SELENOFO60613 162 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 GGCTO75223 188 aaKnown RBP8.06□□□□□ -1.12
COL6A6-201ENST00000358511 RPA2P15927 270 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 HRH1P35367 487 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 IHHQ14623 411 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 PHLDA2Q53GA4 152 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 GGNBP1Q5YKI7 109 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 PAQR6Q6TCH4 344 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 C5orf46Q6UWT4 87 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 ZNF836Q6ZNA1 936 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 TMEM123Q8N131 208 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 ZNF385DQ9H6B1 395 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 AUNIPQ9H7T9 357 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 MED9Q9NWA0 146 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 SSC5DA1L4H1 1573 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 TRAPPC2LH3BP13 241 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 CIDEAO60543 219 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 JMJD7P0C870 316 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 CD70P32970 193 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 CSNK1A1P48729 337 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 HLXQ14774 488 aaPredicted RBP8.06□□□□□ -1.12
COL6A6-201ENST00000358511 SLC10A1Q14973 349 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 ABLIM2Q6H8Q1 611 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 ANKRD16Q6P6B7 361 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 OR2W3Q7Z3T1 314 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 NXF5Q9H1B4 397 aaKnown RBP8.06□□□□□ -1.12
COL6A6-201ENST00000358511 SLC25A37Q9NYZ2 338 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 MIOXQ9UGB7 285 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 FLVCR2Q9UPI3 526 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 OSGIN2Q9Y236 505 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 EPHA2P29317 976 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 EXOSC7Q15024 291 aaKnown RBP8.06□□□□□ -1.12
COL6A6-201ENST00000358511 ELFN2Q5R3F8 820 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 FAM162BQ5T6X4 162 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 FAAP20Q6NZ36 180 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 OR13D1Q8NGV5 346 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 LIN7CQ9NUP9 197 aaKnown RBP8.06□□□□□ -1.12
COL6A6-201ENST00000358511 USP3Q9Y6I4 520 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 TCRBV5S1A1TA0A578 114 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 FAM221BA6H8Z2 402 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 CNMDO75829 334 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 TPBGQ13641 420 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 OR5L1Q8NGL2 311 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 GINS3Q9BRX5 216 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 MEIKINA0A087WXM9 373 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 GLTPD2A6NH11 291 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 ZNF98A6NK75 572 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 CDK2AP1O14519 115 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 ACKR3P25106 362 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 CD81P60033 236 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 CDK5Q00535 292 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 DMWDQ09019 674 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 UBL7Q96S82 380 aaPredicted RBP8.06□□□□□ -1.12
COL6A6-201ENST00000358511 PARD6AQ9NPB6 346 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 DLL4Q9NR61 685 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 SLC35D1Q9NTN3 355 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 A0A1W2PPQ1 181 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 ZNF264O43296 627 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 GJB3O75712 270 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 PCMT1P22061 227 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 DCTDP32321 178 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 MZT1Q08AG7 82 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 MIDNQ504T8 468 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 TOMM20LQ6UXN7 152 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 OR52R1Q8NGF1 315 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 OR5M1Q8NGP8 315 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 ZFPM2Q8WW38 1151 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 FAM122AQ96E09 287 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 REEP6Q96HR9 211 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 FOXN4Q96NZ1 517 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 RHNO1Q9BSD3 238 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 PTDSS2Q9BVG9 487 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 SLC35B3Q9H1N7 401 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 MRPS17Q9Y2R5 130 aaKnown RBP8.06□□□□□ -1.12
COL6A6-201ENST00000358511 RAB27BO00194 218 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 GPR31O00270 319 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 CD14P08571 375 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 CATR1Q13166 79 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 FIGLAQ6QHK4 219 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 OR51A4Q8NGJ6 313 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 LKAAEAR1Q8TD35 194 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 KIRREL1Q96J84 757 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 TNFRSF13CQ96RJ3 184 aa8.06□□□□□ -1.12
COL6A6-201ENST00000358511 ELOA3CA0A087WX78 387 aaPredicted RBP8.05□□□□□ -1.12
COL6A6-201ENST00000358511 HSPB2A8KAH6 182 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 FXYD1O00168 92 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 TCAPO15273 167 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 LRP3O75074 770 aa8.05□□□□□ -1.12
COL6A6-201ENST00000358511 OR7C1O76099 320 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms