RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 Q9UFV3 132 aa8.13□□□□□ -1.11
UPF2-202ENST00000357604 ADAM18Q9Y3Q7 739 aa8.13□□□□□ -1.11
UPF2-202ENST00000357604 COX5BP10606 129 aa8.13□□□□□ -1.11
UPF2-202ENST00000357604 ATP6V1B1P15313 513 aa8.13□□□□□ -1.11
UPF2-202ENST00000357604 ARHGDIBP52566 201 aa8.13□□□□□ -1.11
UPF2-202ENST00000357604 DRAM2Q6UX65 266 aa8.13□□□□□ -1.11
UPF2-202ENST00000357604 CROCCP3Q8IVE0 287 aa8.13□□□□□ -1.11
UPF2-202ENST00000357604 ENTHD1Q8IYW4 607 aa8.13□□□□□ -1.11
UPF2-202ENST00000357604 DHRS1Q96LJ7 313 aa8.13□□□□□ -1.11
UPF2-202ENST00000357604 GDF2Q9UK05 429 aaPredicted RBP8.13□□□□□ -1.11
UPF2-202ENST00000357604 COMMD3-BMI1R4GMX3 469 aa8.13□□□□□ -1.11
UPF2-202ENST00000357604 IGKV3D-15A0A087WSY6 115 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 MEGF11A6BM72 1044 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 TMEM212A6NML5 194 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 SLC2A10O95528 541 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 PPP1CBP62140 327 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 GPR176Q14439 515 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 MKXQ8IYA7 352 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 ELMOD3Q96FG2 381 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 ALG8Q9BVK2 526 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 NKX2-6A6NCS4 301 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 M0R135 149 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 CRMP1Q14194 572 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 SLC17A1Q14916 467 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 RAB39AQ14964 217 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 LRRN1Q6UXK5 716 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 MS4A15Q8N5U1 240 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 BOLLQ8N9W6 283 aaKnown RBP8.12□□□□□ -1.11
UPF2-202ENST00000357604 OR5D14Q8NGL3 314 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 ZNF799Q96GE5 643 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 PLGRKTQ9HBL7 147 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 PTTG3PQ9NZH4 202 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 CENPVL1A0A0U1RR11 272 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 ZC3H12DA2A288 527 aaKnown RBP8.12□□□□□ -1.11
UPF2-202ENST00000357604 HLA-DPB1P04440 258 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 EPXP11678 715 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 HOXB9P17482 250 aaPredicted RBP8.12□□□□□ -1.11
UPF2-202ENST00000357604 MRPS34P82930 218 aaKnown RBP8.12□□□□□ -1.11
UPF2-202ENST00000357604 HFEQ30201 348 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 FAHD1Q6P587 224 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 CLEC2AQ6UVW9 174 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 TFAP2EQ6VUC0 442 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 PTP4A1Q93096 173 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 MOGAT1Q96PD6 335 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 GPX7Q96SL4 187 aaPredicted RBP8.12□□□□□ -1.11
UPF2-202ENST00000357604 ZNF416Q9BWM5 594 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 OR2H1Q9GZK4 316 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 NUAK2Q9H093 628 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 PRSS50Q9UI38 385 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 ATPIF1Q9UII2 106 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 B9A039 149 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 M0R233 179 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 ZG16O60844 167 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 MITFO75030 526 aaPredicted RBP8.12□□□□□ -1.11
UPF2-202ENST00000357604 TXNDC12O95881 172 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 DLX5P56178 289 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 B3GALT5-AS1P59052 145 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 MAPK11Q15759 364 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 RPL22L1Q6P5R6 122 aaKnown RBP8.12□□□□□ -1.11
UPF2-202ENST00000357604 NLRC3Q7RTR2 1065 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 SEMA6DQ8NFY4 1073 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 TSPAN14Q8NG11 270 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 SPOCK3Q9BQ16 436 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 POLE4Q9NR33 117 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 IL20Q9NYY1 176 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 TAAR3PQ9P1P4 343 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 ASH2LQ9UBL3 628 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 HHLA2Q9UM44 414 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 CSAG2Q9Y5P2 127 aa8.12□□□□□ -1.11
UPF2-202ENST00000357604 OR5H1A6NKK0 313 aa8.11□□□□□ -1.11
UPF2-202ENST00000357604 ABCD4O14678 606 aa8.11□□□□□ -1.11
UPF2-202ENST00000357604 RGS9O75916 674 aaPredicted RBP8.11□□□□□ -1.11
UPF2-202ENST00000357604 CALRP27797 417 aaKnown RBP8.11□□□□□ -1.11
UPF2-202ENST00000357604 CBX3Q13185 183 aa8.11□□□□□ -1.11
UPF2-202ENST00000357604 PABPC1L2AQ5JQF8 200 aa8.11□□□□□ -1.11
UPF2-202ENST00000357604 VWA1Q6PCB0 445 aa8.11□□□□□ -1.11
UPF2-202ENST00000357604 SEZ6L2Q6UXD5 910 aa8.11□□□□□ -1.11
UPF2-202ENST00000357604 KLBQ86Z14 1044 aa8.11□□□□□ -1.11
UPF2-202ENST00000357604 EGFL6Q8IUX8 553 aa8.11□□□□□ -1.11
UPF2-202ENST00000357604 NRIP3Q9NQ35 241 aa8.11□□□□□ -1.11
UPF2-202ENST00000357604 TRBV2A0A0J9YWF9 115 aa8.11□□□□□ -1.11
UPF2-202ENST00000357604 SULT1C4O75897 302 aa8.11□□□□□ -1.11
UPF2-202ENST00000357604 PRB1P04280 392 aa8.11□□□□□ -1.11
UPF2-202ENST00000357604 PGA4P0DJD7 388 aa8.11□□□□□ -1.11
UPF2-202ENST00000357604 PGA3P0DJD8 388 aa8.11□□□□□ -1.11
UPF2-202ENST00000357604 PDLIM4P50479 330 aa8.11□□□□□ -1.11
UPF2-202ENST00000357604 PRKXP51817 358 aa8.11□□□□□ -1.11
UPF2-202ENST00000357604 RSU1Q15404 277 aa8.11□□□□□ -1.11
UPF2-202ENST00000357604 OR8B8Q15620 311 aa8.11□□□□□ -1.11
UPF2-202ENST00000357604 TMEM236Q5W0B7 351 aa8.11□□□□□ -1.11
UPF2-202ENST00000357604 LINC00346Q8IVM7 164 aa8.11□□□□□ -1.11
UPF2-202ENST00000357604 RAB1CQ92928 201 aa8.11□□□□□ -1.11
UPF2-202ENST00000357604 HRASLS5Q96KN8 279 aa8.11□□□□□ -1.11
UPF2-202ENST00000357604 CEACAM8P31997 349 aaPredicted RBP8.11□□□□□ -1.11
UPF2-202ENST00000357604 TDGF1P3P51864 188 aa8.11□□□□□ -1.11
UPF2-202ENST00000357604 AQP4P55087 323 aa8.11□□□□□ -1.11
UPF2-202ENST00000357604 C10orf128Q5T292 105 aa8.11□□□□□ -1.11
UPF2-202ENST00000357604 MDP1Q86V88 176 aa8.11□□□□□ -1.11
UPF2-202ENST00000357604 ZDBF2Q9HCK1 2354 aa8.11□□□□□ -1.11
UPF2-202ENST00000357604 FAM25AB3EWG3 89 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms