RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 KIR2DS1A0A191URI9 304 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 CTXN2P0C2S0 81 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 OR8U8P0C7N1 319 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 KIR2DS4P43632 304 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 DIO1P49895 249 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 HLXQ14774 488 aaPredicted RBP11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 KIR2DS1Q14954 304 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 LANCL3Q6ZV70 420 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 ZFP62Q8NB50 900 aaPredicted RBP11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 FBXW5Q969U6 566 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 MRPL22Q9NWU5 206 aaKnown RBP11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 TAAR2Q9P1P5 351 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 HMGN4O00479 90 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 EPXP11678 715 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 DCTDP32321 178 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 HNRNPA3P51991 378 aaKnown RBP11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 SLC17A1Q14916 467 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 EMC4Q5J8M3 183 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 PRSS36Q5K4E3 855 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 ZNF787Q6DD87 383 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 ZNF852Q6ZMS4 543 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 USP53Q70EK8 1073 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 ZNF761Q86XN6 746 aaPredicted RBP11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 NLGN4YQ8NFZ3 816 aaPredicted RBP11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 OR4C16Q8NGL9 310 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 RXFP4Q8TDU9 374 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 INTS12Q96CB8 462 aaKnown RBP11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 PHYHIPLQ96FC7 376 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 GHRLQ9UBU3 117 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 NALCNQ8IZF0 1738 aa11.66□□□□□ -0.54
SYNCRIP-201ENST00000355238 TMED7-TICAM2A0A0A6YYA0 188 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 SMIM6P0DI80 62 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 ZNF92Q03936 586 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 LINC00303Q3SY05 128 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 SLC16A14Q7RTX9 510 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 DCXRQ7Z4W1 244 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 LINC00346Q8IVM7 164 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 SLC24A4Q8NFF2 622 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 OR14A16Q8NHC5 309 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 Q96M85 177 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 CASD1Q96PB1 797 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 PRR14Q9BWN1 585 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 C11orf49Q9H6J7 331 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 BCO1Q9HAY6 547 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 HIF1ANQ9NWT6 349 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 TMED7Q9Y3B3 224 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 CT45A6P0DMU7 189 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 CT45A5P0DMU8 189 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 CT45A7P0DMV0 189 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 CT45A8P0DMV1 189 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 CT45A9P0DMV2 189 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 FGF9P31371 208 aaPredicted RBP11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 PJVKQ0ZLH3 352 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 CT45A2Q5DJT8 189 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 CT45A1Q5HYN5 189 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 RBMXL3Q8N7X1 1067 aaKnown RBP11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 OR4F5Q8NH21 305 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 CT45A3Q8NHU0 189 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 ZFPM2Q8WW38 1151 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 REEP6Q96HR9 211 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 OR4F4Q96R69 305 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 VAMP8Q9BV40 100 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 SUCNR1Q9BXA5 334 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 CDCP1Q9H5V8 836 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 C4AP0C0L4 1744 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 C4BP0C0L5 1744 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 ZIC2O95409 532 aaPredicted RBP11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 SEMA4FO95754 770 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 FABP4P15090 132 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 GALP22466 123 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 ZP2Q05996 745 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 DOK3Q7L591 496 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 SPICQ8N5J4 248 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 TMEM229BQ8NBD8 167 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 INSM2Q96T92 566 aaPredicted RBP11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 ACTR3CQ9C0K3 210 aaPredicted RBP11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 WWTR1Q9GZV5 400 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 ACAD8Q9UKU7 415 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 ADAMTS5Q9UNA0 930 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 FLVCR1Q9Y5Y0 555 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 H0YGG7 62 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 MMP7P09237 267 aaPredicted RBP11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 NTF3P20783 257 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 EGR3Q06889 387 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 DSC1Q08554 894 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 FABP9Q0Z7S8 132 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 AGBL4Q5VU57 503 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 OR8G2PQ6IF36 304 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 SCMH1Q96GD3 660 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 RHNO1Q9BSD3 238 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 ZNF2Q9BSG1 426 aaPredicted RBP11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 DLL4Q9NR61 685 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 LEUTXA8MZ59 168 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 NPPBP16860 134 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 TGFBR3Q03167 851 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 LRRC18Q8N456 261 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 HSD17B8Q92506 261 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 MARVELD1Q9BSK0 173 aa11.65□□□□□ -0.54
SYNCRIP-201ENST00000355238 FAM103A1Q9BTL3 118 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms