RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 CMTM8Q8IZV2 173 aa7.4□□□□□ -1.22
HTT-201ENST00000355072 RBMXL3Q8N7X1 1067 aaKnown RBP7.4□□□□□ -1.22
HTT-201ENST00000355072 ZBTB44Q8NCP5 570 aa7.4□□□□□ -1.22
HTT-201ENST00000355072 ZFP92A6NM28 416 aa7.4□□□□□ -1.23
HTT-201ENST00000355072 SCO2O43819 266 aa7.4□□□□□ -1.23
HTT-201ENST00000355072 SUSD5O60279 629 aa7.4□□□□□ -1.23
HTT-201ENST00000355072 CLEC9AQ6UXN8 241 aa7.4□□□□□ -1.23
HTT-201ENST00000355072 ZNF596Q8TC21 504 aa7.4□□□□□ -1.23
HTT-201ENST00000355072 FBXO34Q9NWN3 711 aa7.4□□□□□ -1.23
HTT-201ENST00000355072 SLC45A2Q9UMX9 530 aa7.4□□□□□ -1.23
HTT-201ENST00000355072 B3GALT5Q9Y2C3 310 aa7.4□□□□□ -1.23
HTT-201ENST00000355072 KCPQ6ZWJ8 1503 aa7.4□□□□□ -1.23
HTT-201ENST00000355072 H7C1C5 153 aa7.4□□□□□ -1.23
HTT-201ENST00000355072 CLDN1O95832 211 aa7.4□□□□□ -1.23
HTT-201ENST00000355072 GHRHP01286 108 aa7.4□□□□□ -1.23
HTT-201ENST00000355072 ZNF140P52738 457 aaPredicted RBP7.4□□□□□ -1.23
HTT-201ENST00000355072 SHC2P98077 582 aa7.4□□□□□ -1.23
HTT-201ENST00000355072 SLAIN1Q8ND83 568 aa7.4□□□□□ -1.23
HTT-201ENST00000355072 AKR7LQ8NHP1 331 aa7.4□□□□□ -1.23
HTT-201ENST00000355072 SGIP1Q9BQI5 828 aa7.4□□□□□ -1.23
HTT-201ENST00000355072 MYOCOSA0A1B0GUC4 107 aa7.4□□□□□ -1.23
HTT-201ENST00000355072 TMEM210A6NLX4 147 aa7.4□□□□□ -1.23
HTT-201ENST00000355072 DBHP09172 617 aa7.4□□□□□ -1.23
HTT-201ENST00000355072 HOXD11P31277 338 aaPredicted RBP7.4□□□□□ -1.23
HTT-201ENST00000355072 SLC6A11P48066 632 aa7.4□□□□□ -1.23
HTT-201ENST00000355072 POU3F4P49335 361 aa7.4□□□□□ -1.23
HTT-201ENST00000355072 XKR7Q5GH72 579 aa7.4□□□□□ -1.23
HTT-201ENST00000355072 PRAMEF20Q5VT98 475 aa7.4□□□□□ -1.23
HTT-201ENST00000355072 RAET1LQ5VY80 246 aa7.4□□□□□ -1.23
HTT-201ENST00000355072 GPR52Q9Y2T5 361 aa7.4□□□□□ -1.23
HTT-201ENST00000355072 ANTXRLA6NF34 631 aa7.4□□□□□ -1.23
HTT-201ENST00000355072 MEIS3P2A8K0S8 358 aa7.4□□□□□ -1.23
HTT-201ENST00000355072 C9JVG2 144 aa7.4□□□□□ -1.23
HTT-201ENST00000355072 SIX6O95475 246 aa7.4□□□□□ -1.23
HTT-201ENST00000355072 CPMP14384 443 aa7.4□□□□□ -1.23
HTT-201ENST00000355072 CDKN1CP49918 316 aaPredicted RBP7.4□□□□□ -1.23
HTT-201ENST00000355072 PAFAH1B2P68402 229 aa7.4□□□□□ -1.23
HTT-201ENST00000355072 GLYATL3Q5SZD4 288 aa7.4□□□□□ -1.23
HTT-201ENST00000355072 C15orf39Q6ZRI6 1047 aa7.4□□□□□ -1.23
HTT-201ENST00000355072 OR4F5Q8NH21 305 aa7.4□□□□□ -1.23
HTT-201ENST00000355072 GPR119Q8TDV5 335 aa7.4□□□□□ -1.23
HTT-201ENST00000355072 OR4F4Q96R69 305 aa7.4□□□□□ -1.23
HTT-201ENST00000355072 NIPSNAP1Q9BPW8 284 aa7.4□□□□□ -1.23
HTT-201ENST00000355072 GOLT1BQ9Y3E0 138 aa7.4□□□□□ -1.23
HTT-201ENST00000355072 URGCP-MRPS24S4R325 110 aa7.4□□□□□ -1.23
HTT-201ENST00000355072 WNK1Q9H4A3 2382 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 IL2RGP31785 369 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 SRP14P37108 136 aaKnown RBP7.39□□□□□ -1.23
HTT-201ENST00000355072 CEBPEQ15744 281 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 H2BFWTQ7Z2G1 175 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 SENP5Q96HI0 755 aaPredicted RBP7.39□□□□□ -1.23
HTT-201ENST00000355072 EGLN2Q96KS0 407 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 TMEM191AQ9H0A3 160 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 SNX11Q9Y5W9 270 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 A0A0U1RQF3 1178 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 FABP2P12104 132 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 PREPP48147 710 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 SLC25A30Q5SVS4 291 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 PRR27Q6MZM9 219 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 FCRLAQ7L513 359 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 METTL1Q9UBP6 276 aaKnown RBP7.39□□□□□ -1.23
HTT-201ENST00000355072 KIAA2026Q5HYC2 2103 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 LTBP4Q8N2S1 1624 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 DOK2O60496 412 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 SPINT3P49223 89 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 GNG4P50150 75 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 ESPNLQ6ZVH7 1005 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 MFSD4AQ8N468 514 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 PRR11Q96HE9 360 aaPredicted RBP7.39□□□□□ -1.23
HTT-201ENST00000355072 AAMDCQ9H7C9 122 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 LYRM4Q9HD34 91 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 GDE1Q9NZC3 331 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 TCRBV7S3A2A0A539 114 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.39□□□□□ -1.23
HTT-201ENST00000355072 ZNF573Q86YE8 665 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 DMBX1Q8NFW5 382 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 SLC25A19Q9HC21 320 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 CSAG2Q9Y5P2 127 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 RPL7P18124 248 aaKnown RBP7.39□□□□□ -1.23
HTT-201ENST00000355072 GDI1P31150 447 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 GALR1P47211 349 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 ZNF90Q03938 601 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 RPEL1Q2QD12 228 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 TOMM20LQ6UXN7 152 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 OR2W3Q7Z3T1 314 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 LRP11Q86VZ4 500 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 NAT6Q93015 286 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 SGCZQ96LD1 299 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 DEFB126Q9BYW3 111 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 GAB2Q9UQC2 676 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 CDRT15L2A8MXV6 281 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 VEGFAP15692 232 aaPredicted RBP7.39□□□□□ -1.23
HTT-201ENST00000355072 GRB7Q14451 532 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 IL20RBQ6UXL0 311 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 SIAH3Q8IW03 269 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 ZNF764Q96H86 408 aaPredicted RBP7.39□□□□□ -1.23
HTT-201ENST00000355072 MS4A10Q96PG2 267 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 TIMM8BQ9Y5J9 83 aaPredicted RBP7.39□□□□□ -1.23
HTT-201ENST00000355072 A0A0U1RQK1 487 aa7.39□□□□□ -1.23
HTT-201ENST00000355072 HSD17B6O14756 317 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms