RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 SLC6A7Q99884 636 aa13.44□□□□□ -0.26
PDGFA-201ENST00000354513 POFUT1Q9H488 388 aa13.44□□□□□ -0.26
PDGFA-201ENST00000354513 MAN2C1Q9NTJ4 1040 aa13.44□□□□□ -0.26
PDGFA-201ENST00000354513 GMPR2Q9P2T1 348 aaKnown RBP13.44□□□□□ -0.26
PDGFA-201ENST00000354513 KLHL21Q9UJP4 597 aa13.44□□□□□ -0.26
PDGFA-201ENST00000354513 PCDHB10Q9UN67 800 aa13.44□□□□□ -0.26
PDGFA-201ENST00000354513 C5orf49A4QMS7 147 aa13.43□□□□□ -0.26
PDGFA-201ENST00000354513 B2RBV5 119 aa13.43□□□□□ -0.26
PDGFA-201ENST00000354513 SPRY3O43610 288 aa13.43□□□□□ -0.26
PDGFA-201ENST00000354513 LAP3P28838 519 aa13.43□□□□□ -0.26
PDGFA-201ENST00000354513 TEKQ02763 1124 aa13.43□□□□□ -0.26
PDGFA-201ENST00000354513 CD47Q08722 323 aa13.43□□□□□ -0.26
PDGFA-201ENST00000354513 TOP3AQ13472 1001 aaPredicted RBP13.43□□□□□ -0.26
PDGFA-201ENST00000354513 SGCAQ16586 387 aa13.43□□□□□ -0.26
PDGFA-201ENST00000354513 FAM27BQ5VT28 67 aa13.43□□□□□ -0.26
PDGFA-201ENST00000354513 ZNF771Q7L3S4 317 aaPredicted RBP13.43□□□□□ -0.26
PDGFA-201ENST00000354513 HDDC2Q7Z4H3 204 aa13.43□□□□□ -0.26
PDGFA-201ENST00000354513 IGFN1Q86VF2 1251 aa13.43□□□□□ -0.26
PDGFA-201ENST00000354513 ZDHHC22Q8N966 263 aa13.43□□□□□ -0.26
PDGFA-201ENST00000354513 ZNF418Q8TF45 676 aaPredicted RBP13.43□□□□□ -0.26
PDGFA-201ENST00000354513 FAM216AQ8WUB2 273 aa13.43□□□□□ -0.26
PDGFA-201ENST00000354513 GEMIN6Q8WXD5 167 aaKnown RBP13.43□□□□□ -0.26
PDGFA-201ENST00000354513 RAB39BQ96DA2 213 aa13.43□□□□□ -0.26
PDGFA-201ENST00000354513 HOPXQ9BPY8 73 aaPredicted RBP13.43□□□□□ -0.26
PDGFA-201ENST00000354513 OR2H1Q9GZK4 316 aa13.43□□□□□ -0.26
PDGFA-201ENST00000354513 LRMDAQ9H2I8 198 aa13.43□□□□□ -0.26
PDGFA-201ENST00000354513 CCNB1IP1Q9NPC3 277 aa13.43□□□□□ -0.26
PDGFA-201ENST00000354513 BAG5Q9UL15 447 aa13.43□□□□□ -0.26
PDGFA-201ENST00000354513 PKD1L1Q8TDX9 2849 aa13.43□□□□□ -0.26
PDGFA-201ENST00000354513 A0A0G2JMP0 313 aa13.42□□□□□ -0.26
PDGFA-201ENST00000354513 A0A0X1KG70 313 aa13.42□□□□□ -0.26
PDGFA-201ENST00000354513 EBAG9O00559 213 aa13.42□□□□□ -0.26
PDGFA-201ENST00000354513 THRBP10828 461 aa13.42□□□□□ -0.26
PDGFA-201ENST00000354513 PSME3P61289 254 aa13.42□□□□□ -0.26
PDGFA-201ENST00000354513 RPL27P61353 136 aaKnown RBP13.42□□□□□ -0.26
PDGFA-201ENST00000354513 PPP1CBP62140 327 aa13.42□□□□□ -0.26
PDGFA-201ENST00000354513 ACTG1P63261 375 aa13.42□□□□□ -0.26
PDGFA-201ENST00000354513 HFEQ30201 348 aa13.42□□□□□ -0.26
PDGFA-201ENST00000354513 ZNF718Q3SXZ3 478 aa13.42□□□□□ -0.26
PDGFA-201ENST00000354513 CYBRD1Q53TN4 286 aa13.42□□□□□ -0.26
PDGFA-201ENST00000354513 ALG10Q5BKT4 473 aa13.42□□□□□ -0.26
PDGFA-201ENST00000354513 ARPINQ7Z6K5 226 aa13.42□□□□□ -0.26
PDGFA-201ENST00000354513 OR4M2Q8NGB6 313 aa13.42□□□□□ -0.26
PDGFA-201ENST00000354513 ELMOD3Q96FG2 381 aa13.42□□□□□ -0.26
PDGFA-201ENST00000354513 SH3GL1Q99961 368 aa13.42□□□□□ -0.26
PDGFA-201ENST00000354513 ALG12Q9BV10 488 aa13.42□□□□□ -0.26
PDGFA-201ENST00000354513 DECR2Q9NUI1 292 aa13.42□□□□□ -0.26
PDGFA-201ENST00000354513 NDE1Q9NXR1 346 aa13.42□□□□□ -0.26
PDGFA-201ENST00000354513 MED31Q9Y3C7 131 aa13.42□□□□□ -0.26
PDGFA-201ENST00000354513 FAM220BPB1ANY3 271 aa13.41□□□□□ -0.26
PDGFA-201ENST00000354513 J3QLI3 93 aa13.41□□□□□ -0.26
PDGFA-201ENST00000354513 TPD52L2O43399 206 aaKnown RBP13.41□□□□□ -0.26
PDGFA-201ENST00000354513 WIPF1O43516 503 aa13.41□□□□□ -0.26
PDGFA-201ENST00000354513 CD55P08174 381 aa13.41□□□□□ -0.26
PDGFA-201ENST00000354513 CST2P09228 141 aa13.41□□□□□ -0.26
PDGFA-201ENST00000354513 IFI30P13284 250 aa13.41□□□□□ -0.26
PDGFA-201ENST00000354513 ANPEPP15144 967 aa13.41□□□□□ -0.26
PDGFA-201ENST00000354513 EGR1P18146 543 aa13.41□□□□□ -0.26
PDGFA-201ENST00000354513 GDI2P50395 445 aaKnown RBP13.41□□□□□ -0.26
PDGFA-201ENST00000354513 BNIP1Q12981 228 aa13.41□□□□□ -0.26
PDGFA-201ENST00000354513 LRRC23Q53EV4 343 aaPredicted RBP13.41□□□□□ -0.26
PDGFA-201ENST00000354513 DCAF12L2Q5VW00 463 aa13.41□□□□□ -0.26
PDGFA-201ENST00000354513 ZNF774Q6NX45 483 aa13.41□□□□□ -0.26
PDGFA-201ENST00000354513 C8orf82Q6P1X6 216 aaPredicted RBP13.41□□□□□ -0.26
PDGFA-201ENST00000354513 C16orf89Q6UX73 402 aa13.41□□□□□ -0.26
PDGFA-201ENST00000354513 ABHD4Q8TB40 342 aa13.41□□□□□ -0.26
PDGFA-201ENST00000354513 PRRC1Q96M27 445 aa13.41□□□□□ -0.26
PDGFA-201ENST00000354513 MSL2Q9HCI7 577 aa13.41□□□□□ -0.26
PDGFA-201ENST00000354513 STX18Q9P2W9 335 aaKnown RBP13.41□□□□□ -0.26
PDGFA-201ENST00000354513 SNX13Q9Y5W8 968 aa13.41□□□□□ -0.26
PDGFA-201ENST00000354513 TRAV27A0A087WT01 109 aa13.4□□□□□ -0.26
PDGFA-201ENST00000354513 H3BSA7 217 aa13.4□□□□□ -0.26
PDGFA-201ENST00000354513 H7C1C5 153 aa13.4□□□□□ -0.26
PDGFA-201ENST00000354513 J3KTA2 159 aa13.4□□□□□ -0.26
PDGFA-201ENST00000354513 FFAR1O14842 300 aa13.4□□□□□ -0.26
PDGFA-201ENST00000354513 IGHV2-70P01814 119 aa13.4□□□□□ -0.26
PDGFA-201ENST00000354513 ZNF26P17031 533 aaPredicted RBP13.4□□□□□ -0.26
PDGFA-201ENST00000354513 ZFP36P26651 326 aaKnown RBP13.4□□□□□ -0.26
PDGFA-201ENST00000354513 GCH1P30793 250 aa13.4□□□□□ -0.26
PDGFA-201ENST00000354513 KDELR2P33947 212 aa13.4□□□□□ -0.26
PDGFA-201ENST00000354513 SLC7A2P52569 658 aa13.4□□□□□ -0.26
PDGFA-201ENST00000354513 CTXN1P60606 82 aa13.4□□□□□ -0.26
PDGFA-201ENST00000354513 LCN6P62502 163 aa13.4□□□□□ -0.26
PDGFA-201ENST00000354513 LCN2P80188 198 aa13.4□□□□□ -0.26
PDGFA-201ENST00000354513 MOGQ16653 247 aa13.4□□□□□ -0.26
PDGFA-201ENST00000354513 ERICH5Q6P6B1 374 aa13.4□□□□□ -0.26
PDGFA-201ENST00000354513 Q6ZR03 302 aa13.4□□□□□ -0.26
PDGFA-201ENST00000354513 CCDC121Q6ZUS5 278 aa13.4□□□□□ -0.26
PDGFA-201ENST00000354513 MICU2Q8IYU8 434 aa13.4□□□□□ -0.26
PDGFA-201ENST00000354513 PGAM4Q8N0Y7 254 aa13.4□□□□□ -0.26
PDGFA-201ENST00000354513 CCL17Q92583 94 aa13.4□□□□□ -0.26
PDGFA-201ENST00000354513 RAB1CQ92928 201 aa13.4□□□□□ -0.26
PDGFA-201ENST00000354513 DVL3Q92997 716 aaPredicted RBP13.4□□□□□ -0.26
PDGFA-201ENST00000354513 BPIFA2Q96DR5 249 aa13.4□□□□□ -0.26
PDGFA-201ENST00000354513 GAL3ST1Q99999 423 aa13.4□□□□□ -0.26
PDGFA-201ENST00000354513 ECSITQ9BQ95 431 aa13.4□□□□□ -0.26
PDGFA-201ENST00000354513 KCNN2Q9H2S1 579 aa13.4□□□□□ -0.26
PDGFA-201ENST00000354513 TRIM77I1YAP6 450 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 ATP5HO75947 161 aa13.39□□□□□ -0.27
PDGFA-201ENST00000354513 PRSS23O95084 383 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms