RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 ZNF660Q6AZW8 331 aaPredicted RBP16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 CORO6Q6QEF8 472 aa16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 ZBTB44Q8NCP5 570 aa16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 ZNF519Q8TB69 540 aa16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 SLC25A44Q96H78 314 aaPredicted RBP16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 TBL1XR1Q9BZK7 514 aa16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 COL4A2P08572 1712 aa16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 A0A1W2PPC1 479 aa16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 EBPQ15125 230 aaKnown RBP16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 TMEM81Q6P7N7 255 aa16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 GSG1LQ6UXU4 331 aa16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 MAMDC2Q7Z304 686 aaPredicted RBP16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 ZNF587Q96SQ5 575 aaPredicted RBP16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 TTYH1Q9H313 450 aaPredicted RBP16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 GPR27Q9NS67 375 aa16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 TAS2R8Q9NYW2 309 aa16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 THADAQ6YHU6 1953 aa16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 CNTRLQ7Z7A1 2325 aa16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 TMED7-TICAM2A0A0A6YYA0 188 aa16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 SLC22A23A1A5C7 686 aa16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 RAB3DO95716 219 aa16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 RLN2P04090 185 aa16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 MYF5P13349 255 aa16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 ATF4P18848 351 aaPredicted RBP16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 C4BPBP20851 252 aa16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 NSDHLQ15738 373 aa16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 NKPD1Q17RQ9 610 aa16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 LY6G6FQ5SQ64 297 aa16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 JAGN1Q8N5M9 183 aa16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 CMBLQ96DG6 245 aa16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 MFFQ9GZY8 342 aa16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 DUSP15Q9H1R2 295 aaPredicted RBP16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 TMED7Q9Y3B3 224 aa16.25■□□□□ 0.19
PTP4A3-202ENST00000349124 UNC13CQ8NB66 2214 aa16.24■□□□□ 0.19
PTP4A3-202ENST00000349124 TRAV14DV4A0A0A6YYC5 116 aa16.24■□□□□ 0.19
PTP4A3-202ENST00000349124 IGKV1D-43A0A0B4J1Z2 117 aa16.24■□□□□ 0.19
PTP4A3-202ENST00000349124 IGHV3-20A0A0C4DH32 117 aa16.24■□□□□ 0.19
PTP4A3-202ENST00000349124 BLACEA4D250 179 aa16.24■□□□□ 0.19
PTP4A3-202ENST00000349124 HMSDA8MTL9 139 aa16.24■□□□□ 0.19
PTP4A3-202ENST00000349124 SOX1O00570 391 aaPredicted RBP16.24■□□□□ 0.19
PTP4A3-202ENST00000349124 OR4E1P0C645 316 aa16.24■□□□□ 0.19
PTP4A3-202ENST00000349124 GP1BBP13224 206 aa16.24■□□□□ 0.19
PTP4A3-202ENST00000349124 HTR2CP28335 458 aa16.24■□□□□ 0.19
PTP4A3-202ENST00000349124 BLKP51451 505 aa16.24■□□□□ 0.19
PTP4A3-202ENST00000349124 SCGB2B2Q4G0G5 96 aa16.24■□□□□ 0.19
PTP4A3-202ENST00000349124 RTN4RL2Q86UN3 420 aa16.24■□□□□ 0.19
PTP4A3-202ENST00000349124 ADAMTS18Q8TE60 1221 aa16.24■□□□□ 0.19
PTP4A3-202ENST00000349124 CABIN1Q9Y6J0 2220 aa16.24■□□□□ 0.19
PTP4A3-202ENST00000349124 KIF26BQ2KJY2 2108 aa16.24■□□□□ 0.19
PTP4A3-202ENST00000349124 TMEM235A6NFC5 223 aa16.24■□□□□ 0.19
PTP4A3-202ENST00000349124 CCSO14618 274 aa16.24■□□□□ 0.19
PTP4A3-202ENST00000349124 AMY2AP04746 511 aa16.24■□□□□ 0.19
PTP4A3-202ENST00000349124 ACHEP22303 614 aa16.24■□□□□ 0.19
PTP4A3-202ENST00000349124 LTBRP36941 435 aa16.24■□□□□ 0.19
PTP4A3-202ENST00000349124 PLCXD2Q0VAA5 305 aa16.24■□□□□ 0.19
PTP4A3-202ENST00000349124 LRRC37A5PQ49AS3 106 aa16.24■□□□□ 0.19
PTP4A3-202ENST00000349124 SLC22A6Q4U2R8 563 aa16.24■□□□□ 0.19
PTP4A3-202ENST00000349124 FAM74A1Q5RGS3 127 aa16.24■□□□□ 0.19
PTP4A3-202ENST00000349124 COL13A1Q5TAT6 717 aaPredicted RBP16.24■□□□□ 0.19
PTP4A3-202ENST00000349124 FDX2Q6P4F2 183 aa16.24■□□□□ 0.19
PTP4A3-202ENST00000349124 CD163Q86VB7 1156 aa16.24■□□□□ 0.19
PTP4A3-202ENST00000349124 SEC22AQ96IW7 307 aa16.24■□□□□ 0.19
PTP4A3-202ENST00000349124 CYYR1Q96J86 154 aa16.24■□□□□ 0.19
PTP4A3-202ENST00000349124 EIF1AYO14602 144 aaKnown RBP16.23■□□□□ 0.19
PTP4A3-202ENST00000349124 B3GALNT1O75752 331 aa16.23■□□□□ 0.19
PTP4A3-202ENST00000349124 ITGB2P05107 769 aa16.23■□□□□ 0.19
PTP4A3-202ENST00000349124 ABCD3P28288 659 aa16.23■□□□□ 0.19
PTP4A3-202ENST00000349124 NUP62P37198 522 aaPredicted RBP16.23■□□□□ 0.19
PTP4A3-202ENST00000349124 FASLGP48023 281 aa16.23■□□□□ 0.19
PTP4A3-202ENST00000349124 CCR5P51681 352 aa16.23■□□□□ 0.19
PTP4A3-202ENST00000349124 ZMYND11Q15326 602 aa16.23■□□□□ 0.19
PTP4A3-202ENST00000349124 SGCBQ16585 318 aa16.23■□□□□ 0.19
PTP4A3-202ENST00000349124 BEX5Q5H9J7 111 aa16.23■□□□□ 0.19
PTP4A3-202ENST00000349124 LIN54Q6MZP7 749 aa16.23■□□□□ 0.19
PTP4A3-202ENST00000349124 ACBD4Q8NC06 268 aa16.23■□□□□ 0.19
PTP4A3-202ENST00000349124 OR1J2Q8NGS2 313 aa16.23■□□□□ 0.19
PTP4A3-202ENST00000349124 SCARB1Q8WTV0 552 aa16.23■□□□□ 0.19
PTP4A3-202ENST00000349124 SLC41A2Q96JW4 573 aa16.23■□□□□ 0.19
PTP4A3-202ENST00000349124 MNTQ99583 582 aa16.23■□□□□ 0.19
PTP4A3-202ENST00000349124 WDR13Q9H1Z4 485 aa16.23■□□□□ 0.19
PTP4A3-202ENST00000349124 PRMT8Q9NR22 394 aaPredicted RBP16.23■□□□□ 0.19
PTP4A3-202ENST00000349124 GPR160Q9UJ42 338 aa16.23■□□□□ 0.19
PTP4A3-202ENST00000349124 IGKV3D-11A0A0A0MRZ8 115 aa16.23■□□□□ 0.19
PTP4A3-202ENST00000349124 WIPF3A6NGB9 483 aa16.23■□□□□ 0.19
PTP4A3-202ENST00000349124 TSPAN2O60636 221 aa16.23■□□□□ 0.19
PTP4A3-202ENST00000349124 RIDAP52758 137 aaKnown RBP16.23■□□□□ 0.19
PTP4A3-202ENST00000349124 LBX1P52954 281 aa16.23■□□□□ 0.19
PTP4A3-202ENST00000349124 C1orf140Q5VVS0 124 aa16.23■□□□□ 0.19
PTP4A3-202ENST00000349124 LANCL3Q6ZV70 420 aa16.23■□□□□ 0.19
PTP4A3-202ENST00000349124 CATSPERDQ86XM0 798 aa16.23■□□□□ 0.19
PTP4A3-202ENST00000349124 B3GNT4Q9C0J1 378 aa16.23■□□□□ 0.19
PTP4A3-202ENST00000349124 TXNIPQ9H3M7 391 aa16.23■□□□□ 0.19
PTP4A3-202ENST00000349124 TMEM82A0PJX8 343 aa16.22■□□□□ 0.19
PTP4A3-202ENST00000349124 PLPP3O14495 311 aa16.22■□□□□ 0.19
PTP4A3-202ENST00000349124 SMAD2Q15796 467 aaKnown RBP16.22■□□□□ 0.19
PTP4A3-202ENST00000349124 HLA-DQA1Q5Y7H0 255 aa16.22■□□□□ 0.19
PTP4A3-202ENST00000349124 OR4D6Q8NGJ1 314 aa16.22■□□□□ 0.19
PTP4A3-202ENST00000349124 OR1S1Q8NH92 325 aa16.22■□□□□ 0.19
PTP4A3-202ENST00000349124 THAP3Q8WTV1 239 aaPredicted RBP16.22■□□□□ 0.19
PTP4A3-202ENST00000349124 PMEPA1Q969W9 287 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms