RNA–Protein interactions for RNA: ENST00000346606.10

CSHL1-203, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 1 (best) BASIC

Gene CSHL1, Length 659 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-203ENST00000346606 DEFB108BQ8NET1 73 aa12.34□□□□□ -0.43
CSHL1-203ENST00000346606 MOSPD2Q8NHP6 518 aa12.34□□□□□ -0.43
CSHL1-203ENST00000346606 LIPHQ8WWY8 451 aa12.34□□□□□ -0.43
CSHL1-203ENST00000346606 ACOT11Q8WXI4 607 aaPredicted RBP12.34□□□□□ -0.43
CSHL1-203ENST00000346606 SLC25A44Q96H78 314 aaPredicted RBP12.34□□□□□ -0.43
CSHL1-203ENST00000346606 FOXB1Q99853 325 aa12.34□□□□□ -0.43
CSHL1-203ENST00000346606 GORASP2Q9H8Y8 452 aa12.34□□□□□ -0.43
CSHL1-203ENST00000346606 NMNAT1Q9HAN9 279 aaPredicted RBP12.34□□□□□ -0.43
CSHL1-203ENST00000346606 INIPQ9NRY2 104 aa12.34□□□□□ -0.43
CSHL1-203ENST00000346606 MAN2C1Q9NTJ4 1040 aa12.34□□□□□ -0.43
CSHL1-203ENST00000346606 FAM53CQ9NYF3 392 aa12.34□□□□□ -0.43
CSHL1-203ENST00000346606 NKIRAS2Q9NYR9 191 aa12.34□□□□□ -0.43
CSHL1-203ENST00000346606 GLTPQ9NZD2 209 aa12.34□□□□□ -0.43
CSHL1-203ENST00000346606 ZNF69Q9UC07 566 aa12.34□□□□□ -0.43
CSHL1-203ENST00000346606 CD300AQ9UGN4 299 aa12.34□□□□□ -0.43
CSHL1-203ENST00000346606 MAGEL2Q9UJ55 1249 aa12.34□□□□□ -0.43
CSHL1-203ENST00000346606 POM121CA8CG34 1229 aa12.33□□□□□ -0.44
CSHL1-203ENST00000346606 EFCAB9A8MZ26 197 aa12.33□□□□□ -0.44
CSHL1-203ENST00000346606 CCL2P13500 99 aa12.33□□□□□ -0.44
CSHL1-203ENST00000346606 ZNF250P15622 560 aa12.33□□□□□ -0.44
CSHL1-203ENST00000346606 MAKP20794 623 aa12.33□□□□□ -0.44
CSHL1-203ENST00000346606 GATA3P23771 443 aa12.33□□□□□ -0.44
CSHL1-203ENST00000346606 DAP3P51398 398 aaKnown RBP12.33□□□□□ -0.44
CSHL1-203ENST00000346606 CLRN1P58418 232 aa12.33□□□□□ -0.44
CSHL1-203ENST00000346606 PRKCDQ05655 676 aa12.33□□□□□ -0.44
CSHL1-203ENST00000346606 PCGF3Q3KNV8 242 aa12.33□□□□□ -0.44
CSHL1-203ENST00000346606 TMEM154Q6P9G4 183 aa12.33□□□□□ -0.44
CSHL1-203ENST00000346606 TBPL2Q6SJ96 375 aa12.33□□□□□ -0.44
CSHL1-203ENST00000346606 RBMS3Q6XE24 437 aaKnown RBP12.33□□□□□ -0.44
CSHL1-203ENST00000346606 RNF113BQ8IZP6 322 aaKnown RBP12.33□□□□□ -0.44
CSHL1-203ENST00000346606 FAM86B1Q8N7N1 296 aa12.33□□□□□ -0.44
CSHL1-203ENST00000346606 TMEM54Q969K7 222 aa12.33□□□□□ -0.44
CSHL1-203ENST00000346606 PYURFQ96I23 114 aa12.33□□□□□ -0.44
CSHL1-203ENST00000346606 NSMCE2Q96MF7 247 aa12.33□□□□□ -0.44
CSHL1-203ENST00000346606 OR51B6Q9H340 312 aa12.33□□□□□ -0.44
CSHL1-203ENST00000346606 DENND2DQ9H6A0 471 aaPredicted RBP12.33□□□□□ -0.44
CSHL1-203ENST00000346606 MMP26Q9NRE1 261 aa12.33□□□□□ -0.44
CSHL1-203ENST00000346606 NDUFAF4Q9P032 175 aa12.33□□□□□ -0.44
CSHL1-203ENST00000346606 A0A087WUU8 490 aa12.32□□□□□ -0.44
CSHL1-203ENST00000346606 CLDN25C9JDP6 229 aa12.32□□□□□ -0.44
CSHL1-203ENST00000346606 ARPC2O15144 300 aa12.32□□□□□ -0.44
CSHL1-203ENST00000346606 DIRAS1O95057 198 aa12.32□□□□□ -0.44
CSHL1-203ENST00000346606 UBL3O95164 117 aa12.32□□□□□ -0.44
CSHL1-203ENST00000346606 IGHG1P01857 330 aa12.32□□□□□ -0.44
CSHL1-203ENST00000346606 H1F0P07305 194 aaKnown RBP12.32□□□□□ -0.44
CSHL1-203ENST00000346606 QDPRP09417 244 aa12.32□□□□□ -0.44
CSHL1-203ENST00000346606 RHCEP18577 417 aa12.32□□□□□ -0.44
CSHL1-203ENST00000346606 RBMXP38159 391 aaKnown RBP12.32□□□□□ -0.44
CSHL1-203ENST00000346606 KLF3P57682 345 aaPredicted RBP12.32□□□□□ -0.44
CSHL1-203ENST00000346606 TSTQ16762 297 aaKnown RBP12.32□□□□□ -0.44
CSHL1-203ENST00000346606 SPATS1Q496A3 300 aa12.32□□□□□ -0.44
CSHL1-203ENST00000346606 ALG10Q5BKT4 473 aa12.32□□□□□ -0.44
CSHL1-203ENST00000346606 TMEM255AQ5JRV8 349 aa12.32□□□□□ -0.44
CSHL1-203ENST00000346606 FGD3Q5JSP0 725 aa12.32□□□□□ -0.44
CSHL1-203ENST00000346606 MBOAT2Q6ZWT7 520 aa12.32□□□□□ -0.44
CSHL1-203ENST00000346606 HDDC2Q7Z4H3 204 aa12.32□□□□□ -0.44
CSHL1-203ENST00000346606 TSEN54Q7Z6J9 526 aaKnown RBP12.32□□□□□ -0.44
CSHL1-203ENST00000346606 OAFQ86UD1 273 aa12.32□□□□□ -0.44
CSHL1-203ENST00000346606 SYT14Q8NB59 555 aa12.32□□□□□ -0.44
CSHL1-203ENST00000346606 OR51A7Q8NH64 312 aa12.32□□□□□ -0.44
CSHL1-203ENST00000346606 SYNPRQ8TBG9 265 aa12.32□□□□□ -0.44
CSHL1-203ENST00000346606 ASB10Q8WXI3 467 aa12.32□□□□□ -0.44
CSHL1-203ENST00000346606 MCUR1Q96AQ8 359 aa12.32□□□□□ -0.44
CSHL1-203ENST00000346606 SLITRK2Q9H156 845 aa12.32□□□□□ -0.44
CSHL1-203ENST00000346606 ANKRD19PQ9H560 264 aa12.32□□□□□ -0.44
CSHL1-203ENST00000346606 SOX21Q9Y651 276 aaPredicted RBP12.32□□□□□ -0.44
CSHL1-203ENST00000346606 TRAV27A0A087WT01 109 aa12.31□□□□□ -0.44
CSHL1-203ENST00000346606 RNASE1P07998 156 aaKnown RBP12.31□□□□□ -0.44
CSHL1-203ENST00000346606 PGA4P0DJD7 388 aa12.31□□□□□ -0.44
CSHL1-203ENST00000346606 PGA3P0DJD8 388 aa12.31□□□□□ -0.44
CSHL1-203ENST00000346606 ACADSP16219 412 aa12.31□□□□□ -0.44
CSHL1-203ENST00000346606 MDKP21741 143 aaPredicted RBP12.31□□□□□ -0.44
CSHL1-203ENST00000346606 CALB2P22676 271 aa12.31□□□□□ -0.44
CSHL1-203ENST00000346606 GPR4P46093 362 aa12.31□□□□□ -0.44
CSHL1-203ENST00000346606 IL13RA1P78552 427 aa12.31□□□□□ -0.44
CSHL1-203ENST00000346606 SRSF4Q08170 494 aaKnown RBP12.31□□□□□ -0.44
CSHL1-203ENST00000346606 BAMBIQ13145 260 aa12.31□□□□□ -0.44
CSHL1-203ENST00000346606 TOP3AQ13472 1001 aaPredicted RBP12.31□□□□□ -0.44
CSHL1-203ENST00000346606 OCLNQ16625 522 aa12.31□□□□□ -0.44
CSHL1-203ENST00000346606 LEG1Q6P5S2 330 aa12.31□□□□□ -0.44
CSHL1-203ENST00000346606 LRFN4Q6PJG9 635 aa12.31□□□□□ -0.44
CSHL1-203ENST00000346606 SLC30A7Q8NEW0 376 aa12.31□□□□□ -0.44
CSHL1-203ENST00000346606 OR52J3Q8NH60 311 aa12.31□□□□□ -0.44
CSHL1-203ENST00000346606 C7orf34Q96L11 122 aa12.31□□□□□ -0.44
CSHL1-203ENST00000346606 ZNF347Q96SE7 839 aa12.31□□□□□ -0.44
CSHL1-203ENST00000346606 GAL3ST1Q99999 423 aa12.31□□□□□ -0.44
CSHL1-203ENST00000346606 STX18Q9P2W9 335 aaKnown RBP12.31□□□□□ -0.44
CSHL1-203ENST00000346606 NUP50Q9UKX7 468 aa12.31□□□□□ -0.44
CSHL1-203ENST00000346606 HIF3AQ9Y2N7 669 aa12.31□□□□□ -0.44
CSHL1-203ENST00000346606 WNK2Q9Y3S1 2297 aa12.31□□□□□ -0.44
CSHL1-203ENST00000346606 ARHGAP32A7KAX9 2087 aa12.3□□□□□ -0.44
CSHL1-203ENST00000346606 PPIAL4EA0A075B759 164 aa12.3□□□□□ -0.44
CSHL1-203ENST00000346606 PPIAL4CA0A0B4J2A2 164 aa12.3□□□□□ -0.44
CSHL1-203ENST00000346606 A0A1W2PRQ8 180 aa12.3□□□□□ -0.44
CSHL1-203ENST00000346606 PPIAL4DF5H284 164 aa12.3□□□□□ -0.44
CSHL1-203ENST00000346606 DHHO43323 396 aa12.3□□□□□ -0.44
CSHL1-203ENST00000346606 TRMUO75648 421 aaKnown RBP12.3□□□□□ -0.44
CSHL1-203ENST00000346606 TSPAN19P0C672 248 aa12.3□□□□□ -0.44
CSHL1-203ENST00000346606 PPIAL4FP0DN26 164 aa12.3□□□□□ -0.44
CSHL1-203ENST00000346606 SLC9A3P48764 834 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms