RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 TAS2R4Q9NYW5 299 aa13.82□□□□□ -0.2
UPF3B-202ENST00000345865 MTFP1Q9UDX5 166 aa13.82□□□□□ -0.2
UPF3B-202ENST00000345865 DHDHQ9UQ10 334 aa13.82□□□□□ -0.2
UPF3B-202ENST00000345865 EML6Q6ZMW3 1958 aa13.81□□□□□ -0.2
UPF3B-202ENST00000345865 A0A1B0GUH1 482 aa13.81□□□□□ -0.2
UPF3B-202ENST00000345865 MEIS3P1A6NDR6 274 aa13.81□□□□□ -0.2
UPF3B-202ENST00000345865 VSTM2BA6NLU5 285 aa13.81□□□□□ -0.2
UPF3B-202ENST00000345865 NPIPA5E9PKD4 350 aa13.81□□□□□ -0.2
UPF3B-202ENST00000345865 SIGLEC6O43699 453 aa13.81□□□□□ -0.2
UPF3B-202ENST00000345865 LMX1BO60663 402 aa13.81□□□□□ -0.2
UPF3B-202ENST00000345865 FCER2P06734 321 aa13.81□□□□□ -0.2
UPF3B-202ENST00000345865 IGFBP3P17936 291 aaPredicted RBP13.81□□□□□ -0.2
UPF3B-202ENST00000345865 DCDP81605 110 aaKnown RBP13.81□□□□□ -0.2
UPF3B-202ENST00000345865 TLE3Q04726 772 aa13.81□□□□□ -0.2
UPF3B-202ENST00000345865 LGALSLQ3ZCW2 172 aaPredicted RBP13.81□□□□□ -0.2
UPF3B-202ENST00000345865 NLRC3Q7RTR2 1065 aa13.81□□□□□ -0.2
UPF3B-202ENST00000345865 OR6S1Q8NH40 331 aa13.81□□□□□ -0.2
UPF3B-202ENST00000345865 SPSB2Q99619 263 aa13.81□□□□□ -0.2
UPF3B-202ENST00000345865 ZNF436Q9C0F3 470 aaPredicted RBP13.81□□□□□ -0.2
UPF3B-202ENST00000345865 NPIPA1Q9UND3 350 aa13.81□□□□□ -0.2
UPF3B-202ENST00000345865 TMEM272A0A1B0GTI8 110 aa13.81□□□□□ -0.2
UPF3B-202ENST00000345865 A0A1W2PPC1 479 aa13.81□□□□□ -0.2
UPF3B-202ENST00000345865 OPN1LWP04000 364 aa13.81□□□□□ -0.2
UPF3B-202ENST00000345865 DHPSP49366 369 aaPredicted RBP13.81□□□□□ -0.2
UPF3B-202ENST00000345865 DLX5P56178 289 aa13.81□□□□□ -0.2
UPF3B-202ENST00000345865 HSF1Q00613 529 aa13.81□□□□□ -0.2
UPF3B-202ENST00000345865 ANGPT1Q15389 498 aa13.81□□□□□ -0.2
UPF3B-202ENST00000345865 RAB11BQ15907 218 aa13.81□□□□□ -0.2
UPF3B-202ENST00000345865 PCK2Q16822 640 aa13.81□□□□□ -0.2
UPF3B-202ENST00000345865 PCGF3Q3KNV8 242 aa13.81□□□□□ -0.2
UPF3B-202ENST00000345865 LRFN4Q6PJG9 635 aa13.81□□□□□ -0.2
UPF3B-202ENST00000345865 LUZP2Q86TE4 346 aa13.81□□□□□ -0.2
UPF3B-202ENST00000345865 ZNF454Q8N9F8 522 aa13.81□□□□□ -0.2
UPF3B-202ENST00000345865 OR10G3Q8NGC4 313 aa13.81□□□□□ -0.2
UPF3B-202ENST00000345865 POC1BQ8TC44 478 aa13.81□□□□□ -0.2
UPF3B-202ENST00000345865 CHST11Q9NPF2 352 aa13.81□□□□□ -0.2
UPF3B-202ENST00000345865 PRMT8Q9NR22 394 aaPredicted RBP13.81□□□□□ -0.2
UPF3B-202ENST00000345865 MRPS18BQ9Y676 258 aaKnown RBP13.81□□□□□ -0.2
UPF3B-202ENST00000345865 R4GMQ9 66 aa13.81□□□□□ -0.2
UPF3B-202ENST00000345865 TRAV18A0A075B6X5 111 aa13.8□□□□□ -0.2
UPF3B-202ENST00000345865 A0A1B0GVI7 797 aa13.8□□□□□ -0.2
UPF3B-202ENST00000345865 LIPT2A6NK58 231 aa13.8□□□□□ -0.2
UPF3B-202ENST00000345865 TOXO94900 526 aa13.8□□□□□ -0.2
UPF3B-202ENST00000345865 NDUFB6O95139 128 aa13.8□□□□□ -0.2
UPF3B-202ENST00000345865 NHLRC1Q6VVB1 395 aa13.8□□□□□ -0.2
UPF3B-202ENST00000345865 GLDNQ6ZMI3 551 aaPredicted RBP13.8□□□□□ -0.2
UPF3B-202ENST00000345865 ZNF782Q6ZMW2 699 aaPredicted RBP13.8□□□□□ -0.2
UPF3B-202ENST00000345865 ZNF767PQ75MW2 155 aa13.8□□□□□ -0.2
UPF3B-202ENST00000345865 OR4C16Q8NGL9 310 aa13.8□□□□□ -0.2
UPF3B-202ENST00000345865 SAP25Q8TEE9 199 aa13.8□□□□□ -0.2
UPF3B-202ENST00000345865 WDR89Q96FK6 387 aaPredicted RBP13.8□□□□□ -0.2
UPF3B-202ENST00000345865 CA10Q9NS85 328 aa13.8□□□□□ -0.2
UPF3B-202ENST00000345865 KLRF1Q9NZS2 232 aa13.8□□□□□ -0.2
UPF3B-202ENST00000345865 B3GAT1Q9P2W7 334 aa13.8□□□□□ -0.2
UPF3B-202ENST00000345865 CGGBP1Q9UFW8 167 aaPredicted RBP13.8□□□□□ -0.2
UPF3B-202ENST00000345865 RARRES3Q9UL19 164 aa13.8□□□□□ -0.2
UPF3B-202ENST00000345865 LOC100289279A0A1B0GTE1 492 aa13.8□□□□□ -0.2
UPF3B-202ENST00000345865 A6NIZ1 184 aa13.8□□□□□ -0.2
UPF3B-202ENST00000345865 ETV2O00321 342 aaPredicted RBP13.8□□□□□ -0.2
UPF3B-202ENST00000345865 PRAF2O60831 178 aa13.8□□□□□ -0.2
UPF3B-202ENST00000345865 RBBP9O75884 186 aa13.8□□□□□ -0.2
UPF3B-202ENST00000345865 OR2J2O76002 312 aa13.8□□□□□ -0.2
UPF3B-202ENST00000345865 TPPPO94811 219 aa13.8□□□□□ -0.2
UPF3B-202ENST00000345865 PNLIPP16233 465 aa13.8□□□□□ -0.2
UPF3B-202ENST00000345865 DNASE1P24855 282 aa13.8□□□□□ -0.2
UPF3B-202ENST00000345865 SUMO3P55854 103 aaPredicted RBP13.8□□□□□ -0.2
UPF3B-202ENST00000345865 PER3P56645 1201 aa13.8□□□□□ -0.2
UPF3B-202ENST00000345865 RAP1BP61224 184 aa13.8□□□□□ -0.2
UPF3B-202ENST00000345865 RAP1AP62834 184 aa13.8□□□□□ -0.2
UPF3B-202ENST00000345865 NR0B2Q15466 257 aa13.8□□□□□ -0.2
UPF3B-202ENST00000345865 HYAL4Q2M3T9 481 aa13.8□□□□□ -0.2
UPF3B-202ENST00000345865 METTL11BQ5VVY1 283 aa13.8□□□□□ -0.2
UPF3B-202ENST00000345865 CPEB2Q7Z5Q1 589 aaKnown RBP13.8□□□□□ -0.2
UPF3B-202ENST00000345865 OR8H1Q8NGG4 311 aa13.8□□□□□ -0.2
UPF3B-202ENST00000345865 OR5M1Q8NGP8 315 aa13.8□□□□□ -0.2
UPF3B-202ENST00000345865 OR2T35Q8NGX2 323 aa13.8□□□□□ -0.2
UPF3B-202ENST00000345865 C15orf40Q8WUR7 153 aa13.8□□□□□ -0.2
UPF3B-202ENST00000345865 SLC25A44Q96H78 314 aaPredicted RBP13.8□□□□□ -0.2
UPF3B-202ENST00000345865 CCDC74BQ96LY2 380 aa13.8□□□□□ -0.2
UPF3B-202ENST00000345865 UTP23Q9BRU9 249 aaKnown RBP13.8□□□□□ -0.2
UPF3B-202ENST00000345865 EMC3Q9P0I2 261 aa13.8□□□□□ -0.2
UPF3B-202ENST00000345865 MYOTQ9UBF9 498 aa13.8□□□□□ -0.2
UPF3B-202ENST00000345865 SIT1Q9Y3P8 196 aa13.8□□□□□ -0.2
UPF3B-202ENST00000345865 TTLL8A6PVC2 850 aa13.79□□□□□ -0.2
UPF3B-202ENST00000345865 PYCARD-AS1I3L0S3 204 aa13.79□□□□□ -0.2
UPF3B-202ENST00000345865 ZNF208O43345 1280 aa13.79□□□□□ -0.2
UPF3B-202ENST00000345865 ZNF823P16415 610 aa13.79□□□□□ -0.2
UPF3B-202ENST00000345865 SSTR2P30874 369 aa13.79□□□□□ -0.2
UPF3B-202ENST00000345865 DAP3P51398 398 aaKnown RBP13.79□□□□□ -0.2
UPF3B-202ENST00000345865 PLPPR5Q32ZL2 321 aa13.79□□□□□ -0.2
UPF3B-202ENST00000345865 GLYATL3Q5SZD4 288 aa13.79□□□□□ -0.2
UPF3B-202ENST00000345865 ZBTB37Q5TC79 503 aa13.79□□□□□ -0.2
UPF3B-202ENST00000345865 LYSMD4Q5XG99 296 aa13.79□□□□□ -0.2
UPF3B-202ENST00000345865 TMEM205Q6UW68 189 aa13.79□□□□□ -0.2
UPF3B-202ENST00000345865 CDH24Q86UP0 819 aa13.79□□□□□ -0.2
UPF3B-202ENST00000345865 OR52B4Q8NGK2 314 aa13.79□□□□□ -0.2
UPF3B-202ENST00000345865 THRSPQ92748 146 aa13.79□□□□□ -0.2
UPF3B-202ENST00000345865 DDIT4LQ96D03 193 aa13.79□□□□□ -0.2
UPF3B-202ENST00000345865 CDCP1Q9H5V8 836 aa13.79□□□□□ -0.2
UPF3B-202ENST00000345865 TMEM185BQ9H7F4 350 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms