RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 RAB11FIP2Q7L804 512 aa16.05■□□□□ 0.16
VHL-202ENST00000345392 PM20D2Q8IYS1 436 aa16.05■□□□□ 0.16
VHL-202ENST00000345392 OR9A4Q8NGU2 314 aa16.05■□□□□ 0.16
VHL-202ENST00000345392 TMEM235A6NFC5 223 aa16.04■□□□□ 0.16
VHL-202ENST00000345392 TGFBR3LH3BV60 316 aa16.04■□□□□ 0.16
VHL-202ENST00000345392 SULT2B1O00204 365 aa16.04■□□□□ 0.16
VHL-202ENST00000345392 OIP5O43482 229 aa16.04■□□□□ 0.16
VHL-202ENST00000345392 DCNP07585 359 aaKnown RBP16.04■□□□□ 0.16
VHL-202ENST00000345392 DEFB110Q30KQ9 67 aa16.04■□□□□ 0.16
VHL-202ENST00000345392 ZFP82Q8N141 532 aa16.04■□□□□ 0.16
VHL-202ENST00000345392 CASTOR1Q8WTX7 329 aa16.04■□□□□ 0.16
VHL-202ENST00000345392 HOXB13Q92826 284 aaPredicted RBP16.04■□□□□ 0.16
VHL-202ENST00000345392 NKD1Q969G9 470 aa16.04■□□□□ 0.16
VHL-202ENST00000345392 INTS14Q96SY0 518 aa16.04■□□□□ 0.16
VHL-202ENST00000345392 CMSS1Q9BQ75 279 aaKnown RBP16.04■□□□□ 0.16
VHL-202ENST00000345392 KLHDC3Q9BQ90 382 aa16.04■□□□□ 0.16
VHL-202ENST00000345392 TLNRD1Q9H1K6 362 aa16.04■□□□□ 0.16
VHL-202ENST00000345392 COA4Q9NYJ1 87 aa16.04■□□□□ 0.16
VHL-202ENST00000345392 MRPS18BQ9Y676 258 aaKnown RBP16.04■□□□□ 0.16
VHL-202ENST00000345392 EEF1E1-BLOC1S5C9J1V9 151 aa16.04■□□□□ 0.16
VHL-202ENST00000345392 COL9A1P20849 921 aa16.04■□□□□ 0.16
VHL-202ENST00000345392 CD96P40200 585 aa16.04■□□□□ 0.16
VHL-202ENST00000345392 PPP1R1AQ13522 171 aa16.04■□□□□ 0.16
VHL-202ENST00000345392 GPR18Q14330 331 aa16.04■□□□□ 0.16
VHL-202ENST00000345392 INPP5JQ15735 1006 aaPredicted RBP16.04■□□□□ 0.16
VHL-202ENST00000345392 CBLN3Q6UW01 205 aa16.04■□□□□ 0.16
VHL-202ENST00000345392 FGF14Q92915 247 aa16.04■□□□□ 0.16
VHL-202ENST00000345392 PHYHIPLQ96FC7 376 aa16.04■□□□□ 0.16
VHL-202ENST00000345392 MBD2Q9UBB5 411 aa16.04■□□□□ 0.16
VHL-202ENST00000345392 EPHA6Q9UF33 1036 aa16.04■□□□□ 0.16
VHL-202ENST00000345392 KLK13Q9UKR3 277 aa16.04■□□□□ 0.16
VHL-202ENST00000345392 DOCK8Q8NF50 2099 aa16.04■□□□□ 0.16
VHL-202ENST00000345392 PRKXP51817 358 aa16.03■□□□□ 0.16
VHL-202ENST00000345392 SKP1P63208 163 aa16.03■□□□□ 0.16
VHL-202ENST00000345392 EGR4Q05215 589 aa16.03■□□□□ 0.16
VHL-202ENST00000345392 EGR3Q06889 387 aa16.03■□□□□ 0.16
VHL-202ENST00000345392 SQSTM1Q13501 440 aa16.03■□□□□ 0.16
VHL-202ENST00000345392 PLEKHN1Q494U1 663 aaPredicted RBP16.03■□□□□ 0.16
VHL-202ENST00000345392 CORO6Q6QEF8 472 aa16.03■□□□□ 0.16
VHL-202ENST00000345392 UQCC3Q6UW78 93 aa16.03■□□□□ 0.16
VHL-202ENST00000345392 KCTD9Q7L273 389 aa16.03■□□□□ 0.16
VHL-202ENST00000345392 THAP6Q8TBB0 222 aa16.03■□□□□ 0.16
VHL-202ENST00000345392 EDAQ92838 391 aa16.03■□□□□ 0.16
VHL-202ENST00000345392 KTI12Q96EK9 354 aaPredicted RBP16.03■□□□□ 0.16
VHL-202ENST00000345392 SLC41A2Q96JW4 573 aa16.03■□□□□ 0.16
VHL-202ENST00000345392 CMKLR1Q99788 373 aa16.03■□□□□ 0.16
VHL-202ENST00000345392 CST11Q9H112 138 aa16.03■□□□□ 0.16
VHL-202ENST00000345392 MMP25Q9NPA2 562 aa16.03■□□□□ 0.16
VHL-202ENST00000345392 MKL2Q9ULH7 1088 aa16.03■□□□□ 0.16
VHL-202ENST00000345392 TMED7Q9Y3B3 224 aa16.03■□□□□ 0.16
VHL-202ENST00000345392 CT45A8P0DMV1 189 aa16.03■□□□□ 0.16
VHL-202ENST00000345392 CT45A9P0DMV2 189 aa16.03■□□□□ 0.16
VHL-202ENST00000345392 HTR2CP28335 458 aa16.03■□□□□ 0.16
VHL-202ENST00000345392 KCNJ3P48549 501 aa16.03■□□□□ 0.16
VHL-202ENST00000345392 GPM6BQ13491 265 aa16.03■□□□□ 0.16
VHL-202ENST00000345392 ZNF528Q3MIS6 628 aa16.03■□□□□ 0.16
VHL-202ENST00000345392 CT45A2Q5DJT8 189 aa16.03■□□□□ 0.16
VHL-202ENST00000345392 FAM166AQ6J272 317 aa16.03■□□□□ 0.16
VHL-202ENST00000345392 H3F3CQ6NXT2 135 aa16.03■□□□□ 0.16
VHL-202ENST00000345392 PARM1Q6UWI2 310 aa16.03■□□□□ 0.16
VHL-202ENST00000345392 GTPBP8Q8N3Z3 284 aaPredicted RBP16.03■□□□□ 0.16
VHL-202ENST00000345392 CSNK1A1LQ8N752 337 aa16.03■□□□□ 0.16
VHL-202ENST00000345392 BCORP1Q8N888 145 aa16.03■□□□□ 0.16
VHL-202ENST00000345392 INO80EQ8NBZ0 244 aaPredicted RBP16.03■□□□□ 0.16
VHL-202ENST00000345392 OR51A2Q8NGJ7 313 aa16.03■□□□□ 0.16
VHL-202ENST00000345392 FAM174AQ8TBP5 190 aa16.03■□□□□ 0.16
VHL-202ENST00000345392 MICU1Q9BPX6 476 aa16.03■□□□□ 0.16
VHL-202ENST00000345392 Q9N2J8 555 aa16.03■□□□□ 0.16
VHL-202ENST00000345392 TAS2R4Q9NYW5 299 aa16.03■□□□□ 0.16
VHL-202ENST00000345392 ZNF629Q9UEG4 869 aaPredicted RBP16.03■□□□□ 0.16
VHL-202ENST00000345392 NUP210LQ5VU65 1888 aa16.03■□□□□ 0.16
VHL-202ENST00000345392 CPED1A4D0V7 1026 aa16.02■□□□□ 0.16
VHL-202ENST00000345392 RAB19A4D1S5 217 aa16.02■□□□□ 0.16
VHL-202ENST00000345392 PLRG1O43660 514 aaKnown RBP16.02■□□□□ 0.16
VHL-202ENST00000345392 NPBWR1P48145 328 aa16.02■□□□□ 0.16
VHL-202ENST00000345392 CXADRP78310 365 aa16.02■□□□□ 0.16
VHL-202ENST00000345392 SSBP1Q04837 148 aaKnown RBP16.02■□□□□ 0.16
VHL-202ENST00000345392 CD226Q15762 336 aa16.02■□□□□ 0.16
VHL-202ENST00000345392 SLC22A6Q4U2R8 563 aa16.02■□□□□ 0.16
VHL-202ENST00000345392 ZNF542PQ5EBM4 170 aa16.02■□□□□ 0.16
VHL-202ENST00000345392 VWA2Q5GFL6 755 aa16.02■□□□□ 0.16
VHL-202ENST00000345392 TMEM196Q5HYL7 178 aa16.02■□□□□ 0.16
VHL-202ENST00000345392 TMEM225Q6GV28 225 aa16.02■□□□□ 0.16
VHL-202ENST00000345392 POMZP3Q6PJE2 187 aa16.02■□□□□ 0.16
VHL-202ENST00000345392 MDGA2Q7Z553 956 aa16.02■□□□□ 0.16
VHL-202ENST00000345392 CTSFQ9UBX1 484 aa16.02■□□□□ 0.16
VHL-202ENST00000345392 TRIOBPQ9H2D6 2365 aa16.02■□□□□ 0.16
VHL-202ENST00000345392 C11orf98E9PRG8 122 aa16.02■□□□□ 0.16
VHL-202ENST00000345392 K7EQS6 105 aa16.02■□□□□ 0.16
VHL-202ENST00000345392 APBB3O95704 486 aa16.02■□□□□ 0.16
VHL-202ENST00000345392 SPP1P10451 314 aa16.02■□□□□ 0.16
VHL-202ENST00000345392 PGAM2P15259 253 aa16.02■□□□□ 0.16
VHL-202ENST00000345392 PMPCAQ10713 525 aa16.02■□□□□ 0.16
VHL-202ENST00000345392 CDNFQ49AH0 187 aa16.02■□□□□ 0.16
VHL-202ENST00000345392 ACBD4Q8NC06 268 aa16.02■□□□□ 0.16
VHL-202ENST00000345392 OR5AP2Q8NGF4 316 aa16.02■□□□□ 0.16
VHL-202ENST00000345392 EDEM2Q9BV94 578 aa16.02■□□□□ 0.16
VHL-202ENST00000345392 DHDHQ9UQ10 334 aa16.02■□□□□ 0.16
VHL-202ENST00000345392 SULT1C2O00338 296 aa16.02■□□□□ 0.15
VHL-202ENST00000345392 VAMP1P23763 118 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms