RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 MYRFQ9Y2G1 1151 aa12.07□□□□□ -0.48
TPM4-202ENST00000344824 FLNAP21333 2647 aaKnown RBP12.07□□□□□ -0.48
TPM4-202ENST00000344824 PTGES3LE9PB15 166 aa12.06□□□□□ -0.48
TPM4-202ENST00000344824 M0R3G1 203 aa12.06□□□□□ -0.48
TPM4-202ENST00000344824 DCTN6O00399 190 aa12.06□□□□□ -0.48
TPM4-202ENST00000344824 ABCD4O14678 606 aa12.06□□□□□ -0.48
TPM4-202ENST00000344824 PRODHO43272 600 aa12.06□□□□□ -0.48
TPM4-202ENST00000344824 UPK3AO75631 287 aa12.06□□□□□ -0.48
TPM4-202ENST00000344824 EEF1B2P24534 225 aaKnown RBP12.06□□□□□ -0.48
TPM4-202ENST00000344824 MPGP29372 298 aa12.06□□□□□ -0.48
TPM4-202ENST00000344824 CSNK1A1P48729 337 aa12.06□□□□□ -0.48
TPM4-202ENST00000344824 ZNF91Q05481 1191 aa12.06□□□□□ -0.48
TPM4-202ENST00000344824 GABRA6Q16445 453 aa12.06□□□□□ -0.48
TPM4-202ENST00000344824 HIKESHIQ53FT3 197 aa12.06□□□□□ -0.48
TPM4-202ENST00000344824 RBM48Q5RL73 367 aaKnown RBP12.06□□□□□ -0.48
TPM4-202ENST00000344824 OR7E24Q6IFN5 339 aa12.06□□□□□ -0.48
TPM4-202ENST00000344824 C20orf204Q6ZNR8 217 aa12.06□□□□□ -0.48
TPM4-202ENST00000344824 MEPCEQ7L2J0 689 aaKnown RBP12.06□□□□□ -0.48
TPM4-202ENST00000344824 SHFQ7M4L6 423 aa12.06□□□□□ -0.48
TPM4-202ENST00000344824 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.06□□□□□ -0.48
TPM4-202ENST00000344824 GPR137CQ8N3F9 429 aa12.06□□□□□ -0.48
TPM4-202ENST00000344824 ZNF540Q8NDQ6 660 aa12.06□□□□□ -0.48
TPM4-202ENST00000344824 ZNRF4Q8WWF5 429 aa12.06□□□□□ -0.48
TPM4-202ENST00000344824 SGCDQ92629 289 aa12.06□□□□□ -0.48
TPM4-202ENST00000344824 NEUROG1Q92886 237 aa12.06□□□□□ -0.48
TPM4-202ENST00000344824 ZMYND19Q96E35 227 aaPredicted RBP12.06□□□□□ -0.48
TPM4-202ENST00000344824 FOXC2Q99958 501 aa12.06□□□□□ -0.48
TPM4-202ENST00000344824 ALG12Q9BV10 488 aa12.06□□□□□ -0.48
TPM4-202ENST00000344824 SCN3BQ9NY72 215 aa12.06□□□□□ -0.48
TPM4-202ENST00000344824 NPAP1Q9NZP6 1156 aa12.06□□□□□ -0.48
TPM4-202ENST00000344824 VSX1Q9NZR4 365 aaPredicted RBP12.06□□□□□ -0.48
TPM4-202ENST00000344824 USF3Q68DE3 2245 aa12.06□□□□□ -0.48
TPM4-202ENST00000344824 IGKV1D-43A0A0B4J1Z2 117 aa12.05□□□□□ -0.48
TPM4-202ENST00000344824 CCDC182A6NF36 153 aa12.05□□□□□ -0.48
TPM4-202ENST00000344824 SNTNA6NMZ2 147 aa12.05□□□□□ -0.48
TPM4-202ENST00000344824 HS3ST1O14792 307 aa12.05□□□□□ -0.48
TPM4-202ENST00000344824 ZNF432O94892 652 aa12.05□□□□□ -0.48
TPM4-202ENST00000344824 GPANK1O95872 356 aa12.05□□□□□ -0.48
TPM4-202ENST00000344824 MRPL3P09001 348 aaKnown RBP12.05□□□□□ -0.48
TPM4-202ENST00000344824 DBTP11182 482 aaKnown RBP12.05□□□□□ -0.48
TPM4-202ENST00000344824 CTLA4P16410 223 aa12.05□□□□□ -0.48
TPM4-202ENST00000344824 SLC2A5P22732 501 aa12.05□□□□□ -0.48
TPM4-202ENST00000344824 HTR1FP30939 366 aa12.05□□□□□ -0.48
TPM4-202ENST00000344824 SLC25A1P53007 311 aa12.05□□□□□ -0.48
TPM4-202ENST00000344824 ROR2Q01974 943 aaKnown RBP12.05□□□□□ -0.48
TPM4-202ENST00000344824 TEKQ02763 1124 aa12.05□□□□□ -0.48
TPM4-202ENST00000344824 PIGFQ07326 219 aa12.05□□□□□ -0.48
TPM4-202ENST00000344824 ETFDHQ16134 617 aa12.05□□□□□ -0.48
TPM4-202ENST00000344824 PHYHD1Q5SRE7 291 aa12.05□□□□□ -0.48
TPM4-202ENST00000344824 SLC25A30Q5SVS4 291 aa12.05□□□□□ -0.48
TPM4-202ENST00000344824 OTPQ5XKR4 325 aa12.05□□□□□ -0.48
TPM4-202ENST00000344824 LYPD4Q6UWN0 246 aa12.05□□□□□ -0.48
TPM4-202ENST00000344824 AHSA2Q719I0 299 aa12.05□□□□□ -0.48
TPM4-202ENST00000344824 P2RY8Q86VZ1 359 aa12.05□□□□□ -0.48
TPM4-202ENST00000344824 TMEM123Q8N131 208 aa12.05□□□□□ -0.48
TPM4-202ENST00000344824 OR6V1Q8N148 313 aa12.05□□□□□ -0.48
TPM4-202ENST00000344824 OR2T4Q8NH00 348 aa12.05□□□□□ -0.48
TPM4-202ENST00000344824 RFKQ969G6 155 aa12.05□□□□□ -0.48
TPM4-202ENST00000344824 FBXW5Q969U6 566 aa12.05□□□□□ -0.48
TPM4-202ENST00000344824 RNFT2Q96EX2 444 aa12.05□□□□□ -0.48
TPM4-202ENST00000344824 PERPQ96FX8 193 aa12.05□□□□□ -0.48
TPM4-202ENST00000344824 RBP7Q96R05 134 aa12.05□□□□□ -0.48
TPM4-202ENST00000344824 SNX18Q96RF0 628 aa12.05□□□□□ -0.48
TPM4-202ENST00000344824 NR1H4Q96RI1 486 aaPredicted RBP12.05□□□□□ -0.48
TPM4-202ENST00000344824 MRPL13Q9BYD1 178 aaKnown RBP12.05□□□□□ -0.48
TPM4-202ENST00000344824 NMNAT2Q9BZQ4 307 aa12.05□□□□□ -0.48
TPM4-202ENST00000344824 SLC17A5Q9NRA2 495 aa12.05□□□□□ -0.48
TPM4-202ENST00000344824 POU2F3Q9UKI9 436 aa12.05□□□□□ -0.48
TPM4-202ENST00000344824 RCE1Q9Y256 329 aa12.05□□□□□ -0.48
TPM4-202ENST00000344824 VPS13CQ709C8 3753 aa12.05□□□□□ -0.48
TPM4-202ENST00000344824 A0A096LPE4 126 aa12.04□□□□□ -0.48
TPM4-202ENST00000344824 A0A1W2PPL8 197 aa12.04□□□□□ -0.48
TPM4-202ENST00000344824 A0A1W2PPZ6 126 aa12.04□□□□□ -0.48
TPM4-202ENST00000344824 DPRXA6NFQ7 191 aa12.04□□□□□ -0.48
TPM4-202ENST00000344824 TVP23AA6NH52 213 aa12.04□□□□□ -0.48
TPM4-202ENST00000344824 OR6C65A6NJZ3 312 aa12.04□□□□□ -0.48
TPM4-202ENST00000344824 SMPD2O60906 423 aa12.04□□□□□ -0.48
TPM4-202ENST00000344824 SEC14L2O76054 403 aa12.04□□□□□ -0.48
TPM4-202ENST00000344824 TNFAIP8O95379 198 aa12.04□□□□□ -0.48
TPM4-202ENST00000344824 HLA-DQA2P01906 255 aa12.04□□□□□ -0.48
TPM4-202ENST00000344824 QDPRP09417 244 aa12.04□□□□□ -0.48
TPM4-202ENST00000344824 CRHBPP24387 322 aa12.04□□□□□ -0.48
TPM4-202ENST00000344824 GSTT1P30711 240 aa12.04□□□□□ -0.48
TPM4-202ENST00000344824 CDH15P55291 814 aa12.04□□□□□ -0.48
TPM4-202ENST00000344824 TUBA1BP68363 451 aa12.04□□□□□ -0.48
TPM4-202ENST00000344824 TUBA4AP68366 448 aa12.04□□□□□ -0.48
TPM4-202ENST00000344824 SPOCK1Q08629 439 aa12.04□□□□□ -0.48
TPM4-202ENST00000344824 TESK1Q15569 626 aa12.04□□□□□ -0.48
TPM4-202ENST00000344824 TBRG1Q3YBR2 411 aa12.04□□□□□ -0.48
TPM4-202ENST00000344824 LCN1P1Q5VSP4 162 aa12.04□□□□□ -0.48
TPM4-202ENST00000344824 DNM1P34Q6PK57 102 aa12.04□□□□□ -0.48
TPM4-202ENST00000344824 SEZ6L2Q6UXD5 910 aa12.04□□□□□ -0.48
TPM4-202ENST00000344824 TMEM108Q6UXF1 575 aa12.04□□□□□ -0.48
TPM4-202ENST00000344824 TUBA1AQ71U36 451 aa12.04□□□□□ -0.48
TPM4-202ENST00000344824 C17orf78Q8N4C9 275 aa12.04□□□□□ -0.48
TPM4-202ENST00000344824 C1orf162Q8NEQ5 155 aaPredicted RBP12.04□□□□□ -0.48
TPM4-202ENST00000344824 OR51G2Q8NGK0 314 aa12.04□□□□□ -0.48
TPM4-202ENST00000344824 OR1K1Q8NGR3 316 aa12.04□□□□□ -0.48
TPM4-202ENST00000344824 TMEM171Q8WVE6 324 aa12.04□□□□□ -0.48
TPM4-202ENST00000344824 GGHQ92820 318 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms