RNA–Protein interactions for RNA: ENST00000341247.8

LIMA1-201, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMA1, Length 3,706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-201ENST00000341247 OR52N5Q8NH56 324 aa9.26□□□□□ -0.93
LIMA1-201ENST00000341247 SAP25Q8TEE9 199 aa9.26□□□□□ -0.93
LIMA1-201ENST00000341247 CLDN23Q96B33 292 aa9.26□□□□□ -0.93
LIMA1-201ENST00000341247 FAM3DQ96BQ1 224 aa9.26□□□□□ -0.93
LIMA1-201ENST00000341247 WDR89Q96FK6 387 aaPredicted RBP9.26□□□□□ -0.93
LIMA1-201ENST00000341247 SPSB2Q99619 263 aa9.26□□□□□ -0.93
LIMA1-201ENST00000341247 CMKLR1Q99788 373 aa9.26□□□□□ -0.93
LIMA1-201ENST00000341247 SLA2Q9H6Q3 261 aa9.26□□□□□ -0.93
LIMA1-201ENST00000341247 METTL17Q9H7H0 456 aaPredicted RBP9.26□□□□□ -0.93
LIMA1-201ENST00000341247 NIPAL2Q9H841 368 aa9.26□□□□□ -0.93
LIMA1-201ENST00000341247 EMC7Q9NPA0 242 aa9.26□□□□□ -0.93
LIMA1-201ENST00000341247 MRPL39Q9NYK5 338 aaKnown RBP9.26□□□□□ -0.93
LIMA1-201ENST00000341247 VSX1Q9NZR4 365 aaPredicted RBP9.26□□□□□ -0.93
LIMA1-201ENST00000341247 MYOTQ9UBF9 498 aa9.26□□□□□ -0.93
LIMA1-201ENST00000341247 ANKRD34BA5PLL1 514 aa9.26□□□□□ -0.93
LIMA1-201ENST00000341247 GSTZ1O43708 216 aaPredicted RBP9.26□□□□□ -0.93
LIMA1-201ENST00000341247 RAMP1O60894 148 aa9.26□□□□□ -0.93
LIMA1-201ENST00000341247 PEX14O75381 377 aa9.26□□□□□ -0.93
LIMA1-201ENST00000341247 CALCBP10092 127 aa9.26□□□□□ -0.93
LIMA1-201ENST00000341247 CRABP1P29762 137 aa9.26□□□□□ -0.93
LIMA1-201ENST00000341247 RAB11BQ15907 218 aa9.26□□□□□ -0.93
LIMA1-201ENST00000341247 GFOD2Q3B7J2 385 aa9.26□□□□□ -0.93
LIMA1-201ENST00000341247 BAIAP2L2Q6UXY1 529 aa9.26□□□□□ -0.93
LIMA1-201ENST00000341247 CARFQ8N187 725 aa9.26□□□□□ -0.93
LIMA1-201ENST00000341247 OR56B4Q8NH76 319 aa9.26□□□□□ -0.93
LIMA1-201ENST00000341247 ASB5Q8WWX0 329 aa9.26□□□□□ -0.93
LIMA1-201ENST00000341247 ASB10Q8WXI3 467 aa9.26□□□□□ -0.93
LIMA1-201ENST00000341247 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 PHYHO14832 338 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 CSN2P05814 226 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 RAB40ALP0C0E4 278 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 CCL4P13236 92 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 GNALP38405 381 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 TMEM225Q6GV28 225 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 OR2T35Q8NGX2 323 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 STK35Q8TDR2 534 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 RAB40AQ8WXH6 277 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 MCHR2Q969V1 340 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 GUCD1Q96NT3 240 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 OR2M2Q96R28 347 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 ZFP64Q9NPA5 681 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 CHST11Q9NPF2 352 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 EIF3KQ9UBQ5 218 aaKnown RBP9.25□□□□□ -0.93
LIMA1-201ENST00000341247 PCDHGA5Q9Y5G8 931 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 A0A1B0GTQ1 180 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 LOC107986453A0A1B0GWG9 222 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 ACOT7O00154 380 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 CTAG2O75638 210 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 GLSO94925 669 aaPredicted RBP9.25□□□□□ -0.93
LIMA1-201ENST00000341247 H2BFMP0C1H6 154 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 LCN1P31025 176 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 PRKXP51817 358 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 ZP1P60852 638 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 MFAP5Q13361 173 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 DYRK1AQ13627 763 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 HACD4Q5VWC8 232 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 COMMD2Q86X83 199 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 C9orf62Q8N4C0 152 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 OR1J4Q8NGS1 313 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 IFI44Q8TCB0 444 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 HGDQ93099 445 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 MR1Q95460 341 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 FAM46BQ96A09 425 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 DDIT4LQ96D03 193 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 HYLS1Q96M11 299 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 SPACA5Q96QH8 159 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 DUSP23Q9BVJ7 150 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 MFRPQ9BY79 579 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 TGIF2Q9GZN2 237 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 EML6Q6ZMW3 1958 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 KNTC1P50748 2209 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 ZNF814B7Z6K7 855 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 CTDSPLO15194 276 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 RBBP9O75884 186 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 ZFAND5O76080 213 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 CD2P06729 351 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 TMEM176BQ3YBM2 270 aaPredicted RBP9.25□□□□□ -0.93
LIMA1-201ENST00000341247 ZNF782Q6ZMW2 699 aaPredicted RBP9.25□□□□□ -0.93
LIMA1-201ENST00000341247 BPHLQ86WA6 291 aaPredicted RBP9.25□□□□□ -0.93
LIMA1-201ENST00000341247 PLCZ1Q86YW0 608 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 SLC26A10Q8NG04 563 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 OR10H5Q8NGA6 315 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 OIT3Q8WWZ8 545 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 ASB17Q8WXJ9 295 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 B3GNT4Q9C0J1 378 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 SERINC1Q9NRX5 453 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 COPZ2Q9P299 210 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 OR52A1Q9UKL2 312 aa9.25□□□□□ -0.93
LIMA1-201ENST00000341247 ERVH48-1M5A8F1 160 aa9.24□□□□□ -0.93
LIMA1-201ENST00000341247 ZNF432O94892 652 aa9.24□□□□□ -0.93
LIMA1-201ENST00000341247 GTF2F2P13984 249 aa9.24□□□□□ -0.93
LIMA1-201ENST00000341247 DNASE1P24855 282 aa9.24□□□□□ -0.93
LIMA1-201ENST00000341247 ZNF81P51508 661 aa9.24□□□□□ -0.93
LIMA1-201ENST00000341247 AP3S2P59780 193 aa9.24□□□□□ -0.93
LIMA1-201ENST00000341247 TNK1Q13470 666 aa9.24□□□□□ -0.93
LIMA1-201ENST00000341247 C11orf40Q8WZ69 217 aa9.24□□□□□ -0.93
LIMA1-201ENST00000341247 ST8SIA1Q92185 356 aa9.24□□□□□ -0.93
LIMA1-201ENST00000341247 ZNF775Q96BV0 537 aaPredicted RBP9.24□□□□□ -0.93
LIMA1-201ENST00000341247 MNTQ99583 582 aa9.24□□□□□ -0.93
LIMA1-201ENST00000341247 AKAP7Q9P0M2 348 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms