RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 CDCA4Q9BXL8 241 aa12.96□□□□□ -0.33
CSRP1-201ENST00000340006 EMC7Q9NPA0 242 aa12.96□□□□□ -0.33
CSRP1-201ENST00000340006 TMEM38BQ9NVV0 291 aa12.96□□□□□ -0.33
CSRP1-201ENST00000340006 HAO2Q9NYQ3 351 aa12.96□□□□□ -0.33
CSRP1-201ENST00000340006 POLR1DQ9Y2S0 133 aa12.96□□□□□ -0.33
CSRP1-201ENST00000340006 UGT2A1Q9Y4X1 527 aa12.96□□□□□ -0.33
CSRP1-201ENST00000340006 IRGMA1A4Y4 181 aa12.96□□□□□ -0.34
CSRP1-201ENST00000340006 SELENOFO60613 162 aa12.96□□□□□ -0.34
CSRP1-201ENST00000340006 RAD51DO75771 328 aa12.96□□□□□ -0.34
CSRP1-201ENST00000340006 RAB36O95755 333 aa12.96□□□□□ -0.34
CSRP1-201ENST00000340006 SCG5P05408 212 aa12.96□□□□□ -0.34
CSRP1-201ENST00000340006 ITGA5P08648 1049 aa12.96□□□□□ -0.34
CSRP1-201ENST00000340006 JUNBP17275 347 aaPredicted RBP12.96□□□□□ -0.34
CSRP1-201ENST00000340006 MSR1P21757 451 aa12.96□□□□□ -0.34
CSRP1-201ENST00000340006 HCCSP53701 268 aa12.96□□□□□ -0.34
CSRP1-201ENST00000340006 MRPS34P82930 218 aaKnown RBP12.96□□□□□ -0.34
CSRP1-201ENST00000340006 POU4F2Q12837 409 aa12.96□□□□□ -0.34
CSRP1-201ENST00000340006 TBCEQ15813 527 aaPredicted RBP12.96□□□□□ -0.34
CSRP1-201ENST00000340006 KLHL24Q6TFL4 600 aa12.96□□□□□ -0.34
CSRP1-201ENST00000340006 GABRG1Q8N1C3 465 aa12.96□□□□□ -0.34
CSRP1-201ENST00000340006 RELL2Q8NC24 303 aaPredicted RBP12.96□□□□□ -0.34
CSRP1-201ENST00000340006 SLC26A10Q8NG04 563 aa12.96□□□□□ -0.34
CSRP1-201ENST00000340006 OR4F15Q8NGB8 312 aa12.96□□□□□ -0.34
CSRP1-201ENST00000340006 LILRB4Q8NHJ6 448 aa12.96□□□□□ -0.34
CSRP1-201ENST00000340006 CNN2Q99439 309 aaKnown RBP12.96□□□□□ -0.34
CSRP1-201ENST00000340006 POLE4Q9NR33 117 aa12.96□□□□□ -0.34
CSRP1-201ENST00000340006 DIMT1Q9UNQ2 313 aaKnown RBP12.96□□□□□ -0.34
CSRP1-201ENST00000340006 HIVEP3Q5T1R4 2406 aa12.96□□□□□ -0.34
CSRP1-201ENST00000340006 FAM90A27PA6NNH2 459 aa12.95□□□□□ -0.34
CSRP1-201ENST00000340006 SPARCP09486 303 aa12.95□□□□□ -0.34
CSRP1-201ENST00000340006 SBK2P0C263 348 aa12.95□□□□□ -0.34
CSRP1-201ENST00000340006 DCKP27707 260 aa12.95□□□□□ -0.34
CSRP1-201ENST00000340006 RPS27P42677 84 aaKnown RBP12.95□□□□□ -0.34
CSRP1-201ENST00000340006 SH3BGRP55822 239 aaPredicted RBP12.95□□□□□ -0.34
CSRP1-201ENST00000340006 FAM27E3Q08E93 113 aa12.95□□□□□ -0.34
CSRP1-201ENST00000340006 IRF3Q14653 427 aa12.95□□□□□ -0.34
CSRP1-201ENST00000340006 RAB39AQ14964 217 aa12.95□□□□□ -0.34
CSRP1-201ENST00000340006 STK11Q15831 433 aa12.95□□□□□ -0.34
CSRP1-201ENST00000340006 SFRP5Q5T4F7 317 aa12.95□□□□□ -0.34
CSRP1-201ENST00000340006 FAM27BQ5VT28 67 aa12.95□□□□□ -0.34
CSRP1-201ENST00000340006 ANKRD16Q6P6B7 361 aa12.95□□□□□ -0.34
CSRP1-201ENST00000340006 SLC16A14Q7RTX9 510 aa12.95□□□□□ -0.34
CSRP1-201ENST00000340006 ZNF433Q8N7K0 673 aaPredicted RBP12.95□□□□□ -0.34
CSRP1-201ENST00000340006 OR2AJ1Q8NGZ0 328 aa12.95□□□□□ -0.34
CSRP1-201ENST00000340006 THEM6Q8WUY1 208 aa12.95□□□□□ -0.34
CSRP1-201ENST00000340006 RORBQ92753 470 aa12.95□□□□□ -0.34
CSRP1-201ENST00000340006 TBX5Q99593 518 aa12.95□□□□□ -0.34
CSRP1-201ENST00000340006 FGF20Q9NP95 211 aaPredicted RBP12.95□□□□□ -0.34
CSRP1-201ENST00000340006 MRPL22Q9NWU5 206 aaKnown RBP12.95□□□□□ -0.34
CSRP1-201ENST00000340006 GALNT8Q9NY28 637 aa12.95□□□□□ -0.34
CSRP1-201ENST00000340006 CACNA1CQ13936 2221 aa12.94□□□□□ -0.34
CSRP1-201ENST00000340006 ZG16O60844 167 aa12.94□□□□□ -0.34
CSRP1-201ENST00000340006 INMTO95050 263 aa12.94□□□□□ -0.34
CSRP1-201ENST00000340006 HRGP04196 525 aa12.94□□□□□ -0.34
CSRP1-201ENST00000340006 IL32P24001 234 aa12.94□□□□□ -0.34
CSRP1-201ENST00000340006 ENTPD1P49961 510 aa12.94□□□□□ -0.34
CSRP1-201ENST00000340006 SLC25A35Q3KQZ1 300 aa12.94□□□□□ -0.34
CSRP1-201ENST00000340006 FOXB2Q5VYV0 432 aa12.94□□□□□ -0.34
CSRP1-201ENST00000340006 OR7E24Q6IFN5 339 aa12.94□□□□□ -0.34
CSRP1-201ENST00000340006 SLC16A9Q7RTY1 509 aa12.94□□□□□ -0.34
CSRP1-201ENST00000340006 DPY19L4Q7Z388 723 aa12.94□□□□□ -0.34
CSRP1-201ENST00000340006 GPR141Q7Z602 305 aa12.94□□□□□ -0.34
CSRP1-201ENST00000340006 OR10H4Q8NGA5 316 aa12.94□□□□□ -0.34
CSRP1-201ENST00000340006 OR1K1Q8NGR3 316 aa12.94□□□□□ -0.34
CSRP1-201ENST00000340006 MUL1Q969V5 352 aa12.94□□□□□ -0.34
CSRP1-201ENST00000340006 ZNF416Q9BWM5 594 aa12.94□□□□□ -0.34
CSRP1-201ENST00000340006 HDHD5Q9BXW7 423 aa12.94□□□□□ -0.34
CSRP1-201ENST00000340006 RNF121Q9H920 327 aa12.94□□□□□ -0.34
CSRP1-201ENST00000340006 ADGRL4Q9HBW9 690 aa12.94□□□□□ -0.34
CSRP1-201ENST00000340006 KCNJ16Q9NPI9 418 aa12.94□□□□□ -0.34
CSRP1-201ENST00000340006 ELOVL5Q9NYP7 299 aa12.94□□□□□ -0.34
CSRP1-201ENST00000340006 LAMP5Q9UJQ1 280 aa12.94□□□□□ -0.34
CSRP1-201ENST00000340006 EXOGQ9Y2C4 368 aaKnown RBP12.94□□□□□ -0.34
CSRP1-201ENST00000340006 NCOA6Q14686 2063 aaPredicted RBP12.94□□□□□ -0.34
CSRP1-201ENST00000340006 PTHP01270 115 aa12.94□□□□□ -0.34
CSRP1-201ENST00000340006 LCKP06239 509 aa12.94□□□□□ -0.34
CSRP1-201ENST00000340006 GAAP10253 952 aa12.94□□□□□ -0.34
CSRP1-201ENST00000340006 CD79AP11912 226 aa12.94□□□□□ -0.34
CSRP1-201ENST00000340006 HOXC12P31275 282 aa12.94□□□□□ -0.34
CSRP1-201ENST00000340006 LSM6P62312 80 aaKnown RBP12.94□□□□□ -0.34
CSRP1-201ENST00000340006 GGTLC2Q14390 218 aa12.94□□□□□ -0.34
CSRP1-201ENST00000340006 HIKESHIQ53FT3 197 aa12.94□□□□□ -0.34
CSRP1-201ENST00000340006 C1QTNF12Q5T7M4 302 aa12.94□□□□□ -0.34
CSRP1-201ENST00000340006 CORO6Q6QEF8 472 aa12.94□□□□□ -0.34
CSRP1-201ENST00000340006 BHLHA15Q7RTS1 189 aaPredicted RBP12.94□□□□□ -0.34
CSRP1-201ENST00000340006 LINC00346Q8IVM7 164 aa12.94□□□□□ -0.34
CSRP1-201ENST00000340006 SKA3Q8IX90 412 aa12.94□□□□□ -0.34
CSRP1-201ENST00000340006 TIGD4Q8IY51 512 aa12.94□□□□□ -0.34
CSRP1-201ENST00000340006 DRAXINQ8NBI3 349 aaPredicted RBP12.94□□□□□ -0.34
CSRP1-201ENST00000340006 FCGR1BQ92637 280 aa12.94□□□□□ -0.34
CSRP1-201ENST00000340006 NABP1Q96AH0 204 aa12.94□□□□□ -0.34
CSRP1-201ENST00000340006 LRRC46Q96FV0 321 aa12.94□□□□□ -0.34
CSRP1-201ENST00000340006 JKAMPQ9P055 326 aa12.94□□□□□ -0.34
CSRP1-201ENST00000340006 CLEC2DQ9UHP7 191 aa12.94□□□□□ -0.34
CSRP1-201ENST00000340006 ERGIC3Q9Y282 383 aa12.94□□□□□ -0.34
CSRP1-201ENST00000340006 SMIM31A0A1B0GVY4 71 aa12.93□□□□□ -0.34
CSRP1-201ENST00000340006 DAPL1A0PJW8 107 aa12.93□□□□□ -0.34
CSRP1-201ENST00000340006 NKX2-6A6NCS4 301 aa12.93□□□□□ -0.34
CSRP1-201ENST00000340006 C12orf71A8MTZ7 269 aa12.93□□□□□ -0.34
CSRP1-201ENST00000340006 PATE4P0C8F1 98 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms