RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 CLDN17P56750 224 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 ZNF91Q05481 1191 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 ELAVL3Q14576 367 aaKnown RBP11.84□□□□□ -0.51
USP47-202ENST00000339865 KDM4DQ6B0I6 523 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 OR2A2Q6IF42 318 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 OR6K3Q8NGY3 331 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 GORASP2Q9H8Y8 452 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 DEPDC5O75140 1603 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 PKDREJQ9NTG1 2253 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 NOTCH3Q9UM47 2321 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 WNK2Q9Y3S1 2297 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 TRGV8A0A0C4DH27 118 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 OR2F2O95006 317 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 HBQ1P09105 142 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 OR1D4P47884 311 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 OR2F1Q13607 317 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 TTC32Q5I0X7 151 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 GRINAQ7Z429 371 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 TGIF2LXQ8IUE1 241 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 LYSMD2Q8IV50 215 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 ZNF778Q96MU6 729 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 NAGKQ9UJ70 344 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 A0A0A6YYJ9 748 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 HMGN2P05204 90 aaKnown RBP11.84□□□□□ -0.51
USP47-202ENST00000339865 GATMP50440 423 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 VEZF1Q14119 521 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 LTB4RQ15722 352 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 ACSM6Q6P461 480 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 DRAM2Q6UX65 266 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 LINC00346Q8IVM7 164 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 OR10P1Q8NGE3 313 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 WDR76Q9H967 626 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 SNX11Q9Y5W9 270 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 NRXN1Q9ULB1 1477 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 P2RY10O00398 339 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 TAAR5O14804 337 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 RAB29O14966 203 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 GCGP01275 180 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 OR8G1Q15617 311 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 ISCA2Q86U28 154 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 ZNF595Q8IYB9 648 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 OR52I1Q8NGK6 324 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 OR2T6Q8NHC8 308 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 SEH1LQ96EE3 360 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 MS4A10Q96PG2 267 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 DMRT3Q9NQL9 472 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 WASHC3Q9Y3C0 194 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 KLK4Q9Y5K2 254 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 LRRC30A6NM36 301 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 SYT5O00445 386 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 ALPLP05186 524 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 ADRA2CP18825 462 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 RFX2P48378 723 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 RTL8BQ17RB0 113 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 EID2Q8N6I1 236 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 ACOT4Q8N9L9 421 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 NUP37Q8NFH4 326 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 LMAN1LQ9HAT1 526 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 FLVCR1Q9Y5Y0 555 aa11.84□□□□□ -0.51
USP47-202ENST00000339865 ALOX5APP20292 161 aa11.83□□□□□ -0.52
USP47-202ENST00000339865 HSD17B13Q7Z5P4 300 aaPredicted RBP11.83□□□□□ -0.52
USP47-202ENST00000339865 TGIF2LYQ8IUE0 185 aa11.83□□□□□ -0.52
USP47-202ENST00000339865 SOWAHBA6NEL2 793 aa11.83□□□□□ -0.52
USP47-202ENST00000339865 F5H697 171 aa11.83□□□□□ -0.52
USP47-202ENST00000339865 SOX15O60248 233 aa11.83□□□□□ -0.52
USP47-202ENST00000339865 AQP8O94778 261 aa11.83□□□□□ -0.52
USP47-202ENST00000339865 Q3ZCU0 254 aa11.83□□□□□ -0.52
USP47-202ENST00000339865 CLLU1Q5K131 121 aa11.83□□□□□ -0.52
USP47-202ENST00000339865 YOD1Q5VVQ6 348 aaPredicted RBP11.83□□□□□ -0.52
USP47-202ENST00000339865 LYSMD4Q5XG99 296 aa11.83□□□□□ -0.52
USP47-202ENST00000339865 DHRS13Q6UX07 377 aa11.83□□□□□ -0.52
USP47-202ENST00000339865 OR5D13Q8NGL4 314 aa11.83□□□□□ -0.52
USP47-202ENST00000339865 GABARAPL1Q9H0R8 117 aa11.83□□□□□ -0.52
USP47-202ENST00000339865 CALHM2Q9HA72 323 aa11.83□□□□□ -0.52
USP47-202ENST00000339865 NAT8BQ9UHF3 227 aa11.83□□□□□ -0.52
USP47-202ENST00000339865 SLC23A1Q9UHI7 598 aa11.83□□□□□ -0.52
USP47-202ENST00000339865 E9PCH4 1651 aa11.83□□□□□ -0.52
USP47-202ENST00000339865 COX7A2P2O60397 106 aa11.83□□□□□ -0.52
USP47-202ENST00000339865 PEX10O60683 326 aa11.83□□□□□ -0.52
USP47-202ENST00000339865 SNNO75324 88 aaPredicted RBP11.83□□□□□ -0.52
USP47-202ENST00000339865 C1QBP02746 253 aa11.83□□□□□ -0.52
USP47-202ENST00000339865 SEMG1P04279 462 aa11.83□□□□□ -0.52
USP47-202ENST00000339865 LRP11Q86VZ4 500 aa11.83□□□□□ -0.52
USP47-202ENST00000339865 OR5AS1Q8N127 324 aa11.83□□□□□ -0.52
USP47-202ENST00000339865 LCORQ96JN0 433 aaPredicted RBP11.83□□□□□ -0.52
USP47-202ENST00000339865 GPR37O15354 613 aa11.83□□□□□ -0.52
USP47-202ENST00000339865 GLAP06280 429 aa11.83□□□□□ -0.52
USP47-202ENST00000339865 CD40P25942 277 aa11.83□□□□□ -0.52
USP47-202ENST00000339865 NKX6-3A6NJ46 265 aa11.83□□□□□ -0.52
USP47-202ENST00000339865 BTNL3Q6UXE8 466 aa11.83□□□□□ -0.52
USP47-202ENST00000339865 ADGRE4PQ86SQ3 457 aa11.83□□□□□ -0.52
USP47-202ENST00000339865 PQLC3Q8N755 202 aa11.83□□□□□ -0.52
USP47-202ENST00000339865 OR1J1Q8NGS3 322 aa11.83□□□□□ -0.52
USP47-202ENST00000339865 DYNC2LI1Q8TCX1 351 aa11.83□□□□□ -0.52
USP47-202ENST00000339865 GPR55Q9Y2T6 319 aaPredicted RBP11.83□□□□□ -0.52
USP47-202ENST00000339865 GABRR3A8MPY1 467 aa11.83□□□□□ -0.52
USP47-202ENST00000339865 CSO75390 466 aaKnown RBP11.83□□□□□ -0.52
USP47-202ENST00000339865 CBR3O75828 277 aa11.83□□□□□ -0.52
USP47-202ENST00000339865 PRSS56P0CW18 603 aa11.83□□□□□ -0.52
USP47-202ENST00000339865 TACR1P25103 407 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms