RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 AWAT1Q58HT5 328 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 DCST2Q5T1A1 773 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 EEF1A1P5Q5VTE0 462 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 ZNF585AQ6P3V2 769 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 LINC00114Q6XXX2 140 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 PARS2Q7L3T8 475 aaKnown RBP8.49□□□□□ -1.05
NECAP1-201ENST00000339754 CD163Q86VB7 1156 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 STX12Q86Y82 276 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 FAM24BQ8N5W8 94 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 KDF1Q8NAX2 398 aaPredicted RBP8.49□□□□□ -1.05
NECAP1-201ENST00000339754 ADAD2Q8NCV1 583 aaKnown RBP8.49□□□□□ -1.05
NECAP1-201ENST00000339754 OR10H5Q8NGA6 315 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 OR4S1Q8NGB4 309 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 GPR148Q8TDV2 347 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 C3orf49Q96BT1 292 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 RASD2Q96D21 266 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 RAB3CQ96E17 227 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 SLC41A2Q96JW4 573 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 LMF1Q96S06 567 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 NMES1Q9C002 83 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 SLC2A8Q9NY64 477 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 APOBEC3BQ9UH17 382 aaKnown RBP8.49□□□□□ -1.05
NECAP1-201ENST00000339754 IL36AQ9UHA7 158 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 ZNF107Q9UII5 783 aaPredicted RBP8.49□□□□□ -1.05
NECAP1-201ENST00000339754 KCNG2Q9UJ96 466 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 KLK13Q9UKR3 277 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 MRPS33Q9Y291 106 aaKnown RBP8.49□□□□□ -1.05
NECAP1-201ENST00000339754 SPTBP11277 2137 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 C4orf47A7E2U8 309 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 EIF1AYO14602 144 aaKnown RBP8.49□□□□□ -1.05
NECAP1-201ENST00000339754 SLC31A2O15432 143 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 LRP3O75074 770 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 ZNF432O94892 652 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 YIF1AO95070 293 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 CXCL10P02778 98 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 ERCC1P07992 297 aaPredicted RBP8.49□□□□□ -1.05
NECAP1-201ENST00000339754 NME1P15531 152 aaKnown RBP8.49□□□□□ -1.05
NECAP1-201ENST00000339754 TACR3P29371 465 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 EIF1AXP47813 144 aaKnown RBP8.49□□□□□ -1.05
NECAP1-201ENST00000339754 ID4P47928 161 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 SKP1P63208 163 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 NTHL1P78549 312 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 SLC7A9P82251 487 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 ZNF239Q16600 458 aaKnown RBP8.49□□□□□ -1.05
NECAP1-201ENST00000339754 ASPHD2Q6ICH7 369 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 DPY19L2P2Q6ZN68 376 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 ZNF627Q7L945 461 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 SLC16A9Q7RTY1 509 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 NRROSQ86YC3 692 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 C1QL4Q86Z23 238 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 PRSS35Q8N3Z0 413 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 ZNF565Q8N9K5 539 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 BHLHE23Q8NDY6 225 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 DOK4Q8TEW6 326 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 CASTOR1Q8WTX7 329 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 CYB5D2Q8WUJ1 264 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 MRGPRX3Q96LB0 322 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 NRSN2Q9GZP1 204 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 CHST5Q9GZS9 411 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 CHRDQ9H2X0 955 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 ZMAT3Q9HA38 289 aaKnown RBP8.49□□□□□ -1.05
NECAP1-201ENST00000339754 POMT1Q9Y6A1 747 aa8.49□□□□□ -1.05
NECAP1-201ENST00000339754 LOC100509620A0A075B734 347 aa8.48□□□□□ -1.05
NECAP1-201ENST00000339754 ARPC3O15145 178 aa8.48□□□□□ -1.05
NECAP1-201ENST00000339754 MED6O75586 246 aa8.48□□□□□ -1.05
NECAP1-201ENST00000339754 DUS4LO95620 317 aaKnown RBP8.48□□□□□ -1.05
NECAP1-201ENST00000339754 SERPINA5P05154 406 aa8.48□□□□□ -1.05
NECAP1-201ENST00000339754 LYL1P12980 280 aa8.48□□□□□ -1.05
NECAP1-201ENST00000339754 MPZP25189 248 aa8.48□□□□□ -1.05
NECAP1-201ENST00000339754 MAS1LP35410 378 aa8.48□□□□□ -1.05
NECAP1-201ENST00000339754 RPL4P36578 427 aaKnown RBP8.48□□□□□ -1.05
NECAP1-201ENST00000339754 MAP3K8P41279 467 aa8.48□□□□□ -1.05
NECAP1-201ENST00000339754 ACAA2P42765 397 aaKnown RBP8.48□□□□□ -1.05
NECAP1-201ENST00000339754 CDKN2AP42771 156 aaKnown RBP8.48□□□□□ -1.05
NECAP1-201ENST00000339754 CDX1P47902 265 aaPredicted RBP8.48□□□□□ -1.05
NECAP1-201ENST00000339754 METAP1P53582 386 aa8.48□□□□□ -1.05
NECAP1-201ENST00000339754 TAS2R60P59551 318 aa8.48□□□□□ -1.05
NECAP1-201ENST00000339754 HMGN3Q15651 99 aa8.48□□□□□ -1.05
NECAP1-201ENST00000339754 ODF4Q2M2E3 257 aa8.48□□□□□ -1.05
NECAP1-201ENST00000339754 TRMT12Q53H54 448 aaKnown RBP8.48□□□□□ -1.05
NECAP1-201ENST00000339754 EXOSC6Q5RKV6 272 aaKnown RBP8.48□□□□□ -1.05
NECAP1-201ENST00000339754 FAHD2BQ6P2I3 314 aaPredicted RBP8.48□□□□□ -1.05
NECAP1-201ENST00000339754 FAM220AQ7Z4H9 259 aa8.48□□□□□ -1.05
NECAP1-201ENST00000339754 AMZ2Q86W34 360 aa8.48□□□□□ -1.05
NECAP1-201ENST00000339754 ZNF676Q8N7Q3 588 aa8.48□□□□□ -1.05
NECAP1-201ENST00000339754 ZDHHC22Q8N966 263 aa8.48□□□□□ -1.05
NECAP1-201ENST00000339754 ROBO4Q8WZ75 1007 aa8.48□□□□□ -1.05
NECAP1-201ENST00000339754 CPNE4Q96A23 557 aaPredicted RBP8.48□□□□□ -1.05
NECAP1-201ENST00000339754 FAHD2AQ96GK7 314 aa8.48□□□□□ -1.05
NECAP1-201ENST00000339754 TSSK2Q96PF2 358 aa8.48□□□□□ -1.05
NECAP1-201ENST00000339754 GAL3ST1Q99999 423 aa8.48□□□□□ -1.05
NECAP1-201ENST00000339754 FN3KRPQ9HA64 309 aa8.48□□□□□ -1.05
NECAP1-201ENST00000339754 OR2S2Q9NQN1 319 aa8.48□□□□□ -1.05
NECAP1-201ENST00000339754 TM7SF3Q9NS93 570 aa8.48□□□□□ -1.05
NECAP1-201ENST00000339754 LEFTY2O00292 366 aa8.48□□□□□ -1.05
NECAP1-201ENST00000339754 ARG1P05089 322 aa8.48□□□□□ -1.05
NECAP1-201ENST00000339754 RBP2P50120 134 aa8.48□□□□□ -1.05
NECAP1-201ENST00000339754 VASPP50552 380 aaPredicted RBP8.48□□□□□ -1.05
NECAP1-201ENST00000339754 MOGAT2Q3SYC2 334 aa8.48□□□□□ -1.05
NECAP1-201ENST00000339754 GXYLT1Q4G148 440 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms