RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 TEX30Q5JUR7 227 aa13.39□□□□□ -0.27
SEC13-201ENST00000337354 SLC25A30Q5SVS4 291 aa13.39□□□□□ -0.27
SEC13-201ENST00000337354 LINC01590Q5TEZ4 76 aa13.39□□□□□ -0.27
SEC13-201ENST00000337354 AADACL4Q5VUY2 407 aa13.39□□□□□ -0.27
SEC13-201ENST00000337354 UGT2A3Q6UWM9 527 aa13.39□□□□□ -0.27
SEC13-201ENST00000337354 TUBA1AQ71U36 451 aa13.39□□□□□ -0.27
SEC13-201ENST00000337354 DHRSXQ8N5I4 330 aa13.39□□□□□ -0.27
SEC13-201ENST00000337354 FGFBP3Q8TAT2 258 aa13.39□□□□□ -0.27
SEC13-201ENST00000337354 FAM81AQ8TBF8 368 aa13.39□□□□□ -0.27
SEC13-201ENST00000337354 ZNRF4Q8WWF5 429 aa13.39□□□□□ -0.27
SEC13-201ENST00000337354 HTRA1Q92743 480 aa13.39□□□□□ -0.27
SEC13-201ENST00000337354 FBXO17Q96EF6 278 aa13.39□□□□□ -0.27
SEC13-201ENST00000337354 PLPPR2Q96GM1 343 aa13.39□□□□□ -0.27
SEC13-201ENST00000337354 ZNF75AQ96N20 296 aa13.39□□□□□ -0.27
SEC13-201ENST00000337354 FOXN4Q96NZ1 517 aa13.39□□□□□ -0.27
SEC13-201ENST00000337354 IL4I1Q96RQ9 567 aa13.39□□□□□ -0.27
SEC13-201ENST00000337354 TEAD3Q99594 435 aa13.39□□□□□ -0.27
SEC13-201ENST00000337354 APOL4Q9BPW4 351 aa13.39□□□□□ -0.27
SEC13-201ENST00000337354 C1QTNF6Q9BXI9 259 aa13.39□□□□□ -0.27
SEC13-201ENST00000337354 MED20Q9H944 212 aa13.39□□□□□ -0.27
SEC13-201ENST00000337354 NPAP1Q9NZP6 1156 aa13.39□□□□□ -0.27
SEC13-201ENST00000337354 ALPK2Q86TB3 2170 aa13.38□□□□□ -0.27
SEC13-201ENST00000337354 IQCMA0A1B0GVH7 501 aa13.38□□□□□ -0.27
SEC13-201ENST00000337354 DPRXA6NFQ7 191 aa13.38□□□□□ -0.27
SEC13-201ENST00000337354 SLC22A31A6NKX4 558 aa13.38□□□□□ -0.27
SEC13-201ENST00000337354 H0YAE9 185 aa13.38□□□□□ -0.27
SEC13-201ENST00000337354 M0R1B8 84 aa13.38□□□□□ -0.27
SEC13-201ENST00000337354 CTAG2O75638 210 aa13.38□□□□□ -0.27
SEC13-201ENST00000337354 PATE4P0C8F1 98 aa13.38□□□□□ -0.27
SEC13-201ENST00000337354 ZNF32P17041 273 aa13.38□□□□□ -0.27
SEC13-201ENST00000337354 SLC2A5P22732 501 aa13.38□□□□□ -0.27
SEC13-201ENST00000337354 CD40P25942 277 aa13.38□□□□□ -0.27
SEC13-201ENST00000337354 GSTT1P30711 240 aa13.38□□□□□ -0.27
SEC13-201ENST00000337354 SNRPGP62308 76 aaKnown RBP13.38□□□□□ -0.27
SEC13-201ENST00000337354 MEDAGQ5VYS4 303 aa13.38□□□□□ -0.27
SEC13-201ENST00000337354 MEPCEQ7L2J0 689 aaKnown RBP13.38□□□□□ -0.27
SEC13-201ENST00000337354 GID4Q8IVV7 300 aa13.38□□□□□ -0.27
SEC13-201ENST00000337354 ZNF295-AS1Q8N0V1 137 aa13.38□□□□□ -0.27
SEC13-201ENST00000337354 GJC3Q8NFK1 279 aa13.38□□□□□ -0.27
SEC13-201ENST00000337354 OR51L1Q8NGJ5 315 aa13.38□□□□□ -0.27
SEC13-201ENST00000337354 OR6K6Q8NGW6 343 aa13.38□□□□□ -0.27
SEC13-201ENST00000337354 NRG4Q8WWG1 115 aa13.38□□□□□ -0.27
SEC13-201ENST00000337354 RFKQ969G6 155 aa13.38□□□□□ -0.27
SEC13-201ENST00000337354 MARCH7Q9H992 704 aa13.38□□□□□ -0.27
SEC13-201ENST00000337354 EMC7Q9NPA0 242 aa13.38□□□□□ -0.27
SEC13-201ENST00000337354 RASSF1Q9NS23 344 aa13.38□□□□□ -0.27
SEC13-201ENST00000337354 MRPL22Q9NWU5 206 aaKnown RBP13.38□□□□□ -0.27
SEC13-201ENST00000337354 ASH2LQ9UBL3 628 aa13.38□□□□□ -0.27
SEC13-201ENST00000337354 CYB5R1Q9UHQ9 305 aa13.38□□□□□ -0.27
SEC13-201ENST00000337354 CRYBG3Q68DQ2 2970 aa13.38□□□□□ -0.27
SEC13-201ENST00000337354 FREM1Q5H8C1 2179 aa13.37□□□□□ -0.27
SEC13-201ENST00000337354 IGHV1-18A0A0C4DH31 117 aa13.37□□□□□ -0.27
SEC13-201ENST00000337354 SNTNA6NMZ2 147 aa13.37□□□□□ -0.27
SEC13-201ENST00000337354 GPANK1O95872 356 aa13.37□□□□□ -0.27
SEC13-201ENST00000337354 CRYAAP02489 173 aa13.37□□□□□ -0.27
SEC13-201ENST00000337354 CD3EP07766 207 aa13.37□□□□□ -0.27
SEC13-201ENST00000337354 ZNF14P17017 642 aaPredicted RBP13.37□□□□□ -0.27
SEC13-201ENST00000337354 RPS7P62081 194 aaKnown RBP13.37□□□□□ -0.27
SEC13-201ENST00000337354 ADAM8P78325 824 aa13.37□□□□□ -0.27
SEC13-201ENST00000337354 PSG4Q00888 419 aa13.37□□□□□ -0.27
SEC13-201ENST00000337354 BSPH1Q075Z2 132 aa13.37□□□□□ -0.27
SEC13-201ENST00000337354 TMED1Q13445 227 aa13.37□□□□□ -0.27
SEC13-201ENST00000337354 IL18R1Q13478 541 aa13.37□□□□□ -0.27
SEC13-201ENST00000337354 PCK2Q16822 640 aa13.37□□□□□ -0.27
SEC13-201ENST00000337354 LCN1P1Q5VSP4 162 aa13.37□□□□□ -0.27
SEC13-201ENST00000337354 FBXW10Q5XX13 1052 aa13.37□□□□□ -0.27
SEC13-201ENST00000337354 ZNF511Q8NB15 262 aa13.37□□□□□ -0.27
SEC13-201ENST00000337354 OR2AJ1Q8NGZ0 328 aa13.37□□□□□ -0.27
SEC13-201ENST00000337354 PIK3IP1Q96FE7 263 aa13.37□□□□□ -0.27
SEC13-201ENST00000337354 OR2H1Q9GZK4 316 aa13.37□□□□□ -0.27
SEC13-201ENST00000337354 HAO2Q9NYQ3 351 aa13.37□□□□□ -0.27
SEC13-201ENST00000337354 POLR1DQ9Y2S0 133 aa13.37□□□□□ -0.27
SEC13-201ENST00000337354 ADGRG4Q8IZF6 3080 aa13.36□□□□□ -0.27
SEC13-201ENST00000337354 SIAH2O43255 324 aa13.36□□□□□ -0.27
SEC13-201ENST00000337354 COX5BP10606 129 aa13.36□□□□□ -0.27
SEC13-201ENST00000337354 PRF1P14222 555 aa13.36□□□□□ -0.27
SEC13-201ENST00000337354 ENTPD1P49961 510 aa13.36□□□□□ -0.27
SEC13-201ENST00000337354 IDH3GP51553 393 aaPredicted RBP13.36□□□□□ -0.27
SEC13-201ENST00000337354 HIST1H3AP68431 136 aa13.36□□□□□ -0.27
SEC13-201ENST00000337354 ADARB1P78563 741 aaKnown RBP13.36□□□□□ -0.27
SEC13-201ENST00000337354 TLE4Q04727 773 aa13.36□□□□□ -0.27
SEC13-201ENST00000337354 DBPQ10586 325 aaPredicted RBP13.36□□□□□ -0.27
SEC13-201ENST00000337354 APOFQ13790 326 aa13.36□□□□□ -0.27
SEC13-201ENST00000337354 RAB39AQ14964 217 aa13.36□□□□□ -0.27
SEC13-201ENST00000337354 OCLNQ16625 522 aa13.36□□□□□ -0.27
SEC13-201ENST00000337354 MEP1BQ16820 701 aa13.36□□□□□ -0.27
SEC13-201ENST00000337354 PABPC1L2AQ5JQF8 200 aa13.36□□□□□ -0.27
SEC13-201ENST00000337354 HIST2H3PS2Q5TEC6 136 aa13.36□□□□□ -0.27
SEC13-201ENST00000337354 HIST2H3AQ71DI3 136 aa13.36□□□□□ -0.27
SEC13-201ENST00000337354 SHFQ7M4L6 423 aa13.36□□□□□ -0.27
SEC13-201ENST00000337354 BBS1Q8NFJ9 593 aa13.36□□□□□ -0.27
SEC13-201ENST00000337354 OR1J2Q8NGS2 313 aa13.36□□□□□ -0.27
SEC13-201ENST00000337354 RHOXF1Q8NHV9 184 aa13.36□□□□□ -0.27
SEC13-201ENST00000337354 Q96MT0 163 aa13.36□□□□□ -0.27
SEC13-201ENST00000337354 INTS14Q96SY0 518 aa13.36□□□□□ -0.27
SEC13-201ENST00000337354 KCNS3Q9BQ31 491 aa13.36□□□□□ -0.27
SEC13-201ENST00000337354 TMEM204Q9BSN7 226 aa13.36□□□□□ -0.27
SEC13-201ENST00000337354 ADI1Q9BV57 179 aa13.36□□□□□ -0.27
SEC13-201ENST00000337354 RASSF4Q9H2L5 321 aa13.36□□□□□ -0.27
SEC13-201ENST00000337354 NOX3Q9HBY0 568 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms