RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 CDPF1Q6NVV7 123 aa12.54□□□□□ -0.4
SF1-202ENST00000334944 SYT13Q7L8C5 426 aa12.54□□□□□ -0.4
SF1-202ENST00000334944 ZNF563Q8TA94 476 aa12.54□□□□□ -0.4
SF1-202ENST00000334944 FAM174AQ8TBP5 190 aa12.54□□□□□ -0.4
SF1-202ENST00000334944 PAQR8Q8TEZ7 354 aa12.54□□□□□ -0.4
SF1-202ENST00000334944 DUSP19Q8WTR2 217 aa12.54□□□□□ -0.4
SF1-202ENST00000334944 CA5BP1Q8WTZ4 195 aa12.54□□□□□ -0.4
SF1-202ENST00000334944 TSPAN10Q9H1Z9 355 aaPredicted RBP12.54□□□□□ -0.4
SF1-202ENST00000334944 RHPN2P1A8MT19 583 aa12.54□□□□□ -0.4
SF1-202ENST00000334944 PLGP00747 810 aaPredicted RBP12.54□□□□□ -0.4
SF1-202ENST00000334944 NME1P15531 152 aaKnown RBP12.54□□□□□ -0.4
SF1-202ENST00000334944 S100PP25815 95 aa12.54□□□□□ -0.4
SF1-202ENST00000334944 RORAP35398 523 aa12.54□□□□□ -0.4
SF1-202ENST00000334944 GABRA4P48169 554 aa12.54□□□□□ -0.4
SF1-202ENST00000334944 FCRLAQ7L513 359 aa12.54□□□□□ -0.4
SF1-202ENST00000334944 NKX3-1Q99801 234 aaPredicted RBP12.54□□□□□ -0.4
SF1-202ENST00000334944 TAS2R10Q9NYW0 307 aa12.54□□□□□ -0.4
SF1-202ENST00000334944 NCDNQ9UBB6 729 aa12.54□□□□□ -0.4
SF1-202ENST00000334944 COL4A2P08572 1712 aa12.54□□□□□ -0.4
SF1-202ENST00000334944 IGHV3-20A0A0C4DH32 117 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 UBE2QL1A1L167 161 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 HMSDA8MTL9 139 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 C11orf98E9PRG8 122 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 GATCO43716 136 aaKnown RBP12.53□□□□□ -0.4
SF1-202ENST00000334944 OR8G3PP0DMU2 310 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 NQO2P16083 231 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 ADH6P28332 368 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 RBM34P42696 430 aaKnown RBP12.53□□□□□ -0.4
SF1-202ENST00000334944 FASLGP48023 281 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 GPR143P51810 404 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 PPIAP62937 165 aaKnown RBP12.53□□□□□ -0.4
SF1-202ENST00000334944 SIRPAP78324 504 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 BDH1Q02338 343 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 LTBQ06643 244 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 ALKBH1Q13686 389 aaKnown RBP12.53□□□□□ -0.4
SF1-202ENST00000334944 KLHL26Q53HC5 615 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 HACD4Q5VWC8 232 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 OR2AK2Q8NG84 335 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 OR6K3Q8NGY3 331 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 SEC22AQ96IW7 307 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 CUTCQ9NTM9 273 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 ZNF629Q9UEG4 869 aaPredicted RBP12.53□□□□□ -0.4
SF1-202ENST00000334944 KLHDC2Q9Y2U9 406 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 TMEM72A0PK05 275 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 C2orf72A6NCS6 295 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 C10orf142B7Z368 130 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 HCRTR2O43614 444 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 FADS1O60427 444 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 KRT33AO76009 404 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 UTS2O95399 124 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 CD63P08962 238 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 LIPCP11150 499 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 SOX2P48431 317 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 ARL4DP49703 201 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 NRG3P56975 720 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 SLC37A1P57057 533 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 NANOS3P60323 173 aaKnown RBP12.53□□□□□ -0.4
SF1-202ENST00000334944 CTXN1P60606 82 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 SKP2Q13309 424 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 OR7A5Q15622 319 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 YOD1Q5VVQ6 348 aaPredicted RBP12.53□□□□□ -0.4
SF1-202ENST00000334944 DHRS7BQ6IAN0 325 aaPredicted RBP12.53□□□□□ -0.4
SF1-202ENST00000334944 TSSK4Q6SA08 328 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 MARCH3Q86UD3 253 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 THAP3Q8WTV1 239 aaPredicted RBP12.53□□□□□ -0.4
SF1-202ENST00000334944 SLC25A38Q96DW6 304 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 SERTAD3Q9UJW9 196 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 SCDO00767 359 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 CCSO14618 274 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 IGLV3-19P01714 112 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 TACR3P29371 465 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 NR0B1P51843 470 aaKnown RBP12.53□□□□□ -0.4
SF1-202ENST00000334944 GMFBP60983 142 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 EGR4Q05215 589 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 CDK5R1Q15078 307 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 C4orf46Q504U0 113 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 MOB3CQ70IA8 216 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 GKN2Q86XP6 184 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 C1orf216Q8TAB5 229 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 SLC25A36Q96CQ1 311 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 SYNDIG1Q9H7V2 258 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 LANCL2Q9NS86 450 aa12.53□□□□□ -0.4
SF1-202ENST00000334944 GPR37O15354 613 aa12.52□□□□□ -0.4
SF1-202ENST00000334944 RAD1O60671 282 aa12.52□□□□□ -0.4
SF1-202ENST00000334944 TMIGD3P0DMS9 266 aaPredicted RBP12.52□□□□□ -0.4
SF1-202ENST00000334944 CPN1P15169 458 aa12.52□□□□□ -0.4
SF1-202ENST00000334944 GRK6P43250 576 aa12.52□□□□□ -0.4
SF1-202ENST00000334944 HSD17B7P56937 341 aa12.52□□□□□ -0.4
SF1-202ENST00000334944 RAB5BP61020 215 aa12.52□□□□□ -0.4
SF1-202ENST00000334944 RPS11P62280 158 aaKnown RBP eCLIP12.52□□□□□ -0.4
SF1-202ENST00000334944 SKP1P63208 163 aa12.52□□□□□ -0.4
SF1-202ENST00000334944 IGLV3-21P80748 117 aaPredicted RBP12.52□□□□□ -0.4
SF1-202ENST00000334944 FAM69AQ5T7M9 428 aa12.52□□□□□ -0.4
SF1-202ENST00000334944 ELP5Q8TE02 316 aa12.52□□□□□ -0.4
SF1-202ENST00000334944 C14orf79Q96F83 325 aa12.52□□□□□ -0.4
SF1-202ENST00000334944 NAA11Q9BSU3 229 aaPredicted RBP12.52□□□□□ -0.4
SF1-202ENST00000334944 ALG12Q9BV10 488 aa12.52□□□□□ -0.4
SF1-202ENST00000334944 CHRDQ9H2X0 955 aa12.52□□□□□ -0.4
SF1-202ENST00000334944 NOX4Q9NPH5 578 aa12.52□□□□□ -0.4
SF1-202ENST00000334944 ZNF337Q9Y3M9 751 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms