RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 TMEM27Q9HBJ8 222 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 OTOL1A6NHN0 477 aaPredicted RBP10.78□□□□□ -0.68
LIMK2-202ENST00000333611 SBK2P0C263 348 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 PAX6P26367 422 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 TM4SF4P48230 202 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 PKIAP61925 76 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 MLF2Q15773 248 aaPredicted RBP10.78□□□□□ -0.68
LIMK2-202ENST00000333611 HNRNPA1L2Q32P51 320 aaKnown RBP10.78□□□□□ -0.68
LIMK2-202ENST00000333611 SLC25A30Q5SVS4 291 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 NSUN5P2Q63ZY6 315 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 TANGO2Q6ICL3 276 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 THNSL2Q86YJ6 484 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 CHST4Q8NCG5 386 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 OR4K17Q8NGC6 315 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 MITD1Q8WV92 249 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 LCN9Q8WX39 176 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 SLC25A38Q96DW6 304 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 MYADMQ96S97 322 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 ELOVL1Q9BW60 279 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 CBLN4Q9NTU7 201 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 MRPS18AQ9NVS2 196 aaKnown RBP10.78□□□□□ -0.68
LIMK2-202ENST00000333611 RCC2Q9P258 522 aaKnown RBP10.78□□□□□ -0.68
LIMK2-202ENST00000333611 ZNF346Q9UL40 294 aaKnown RBP10.78□□□□□ -0.68
LIMK2-202ENST00000333611 ADAM18Q9Y3Q7 739 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 SLC22A31A6NKX4 558 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 UMAD1C9J7I0 102 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 IGHA1P01876 353 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 SFTPBP07988 381 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 GABRA3P34903 492 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 METRNLQ641Q3 311 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 LCN10Q6JVE6 187 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 CNKSR3Q6P9H4 555 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 Q6ZRG5 221 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 PARGQ86W56 976 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 FGF11Q92914 225 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 G6PC3Q9BUM1 346 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 BARX1Q9HBU1 254 aaPredicted RBP10.78□□□□□ -0.68
LIMK2-202ENST00000333611 KCNJ16Q9NPI9 418 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 PRDM7Q9NQW5 492 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 CLDND1Q9NY35 253 aa10.78□□□□□ -0.68
LIMK2-202ENST00000333611 LOC102724200A0A096LPH7 203 aaPredicted RBP10.77□□□□□ -0.68
LIMK2-202ENST00000333611 C1QTNF3-AMACRE9PGA6 284 aa10.77□□□□□ -0.68
LIMK2-202ENST00000333611 OR2F2O95006 317 aa10.77□□□□□ -0.68
LIMK2-202ENST00000333611 RCBTB2O95199 551 aa10.77□□□□□ -0.68
LIMK2-202ENST00000333611 SCGB1D2O95969 90 aa10.77□□□□□ -0.68
LIMK2-202ENST00000333611 AK4P27144 223 aaPredicted RBP10.77□□□□□ -0.68
LIMK2-202ENST00000333611 PPM1AP35813 382 aa10.77□□□□□ -0.68
LIMK2-202ENST00000333611 SEC13P55735 322 aa10.77□□□□□ -0.68
LIMK2-202ENST00000333611 IL13RA1P78552 427 aa10.77□□□□□ -0.68
LIMK2-202ENST00000333611 SGCGQ13326 291 aa10.77□□□□□ -0.68
LIMK2-202ENST00000333611 OR2F1Q13607 317 aa10.77□□□□□ -0.68
LIMK2-202ENST00000333611 MRM1Q6IN84 353 aaKnown RBP10.77□□□□□ -0.68
LIMK2-202ENST00000333611 SPRED2Q7Z698 418 aa10.77□□□□□ -0.68
LIMK2-202ENST00000333611 LRRC25Q8N386 305 aaPredicted RBP10.77□□□□□ -0.68
LIMK2-202ENST00000333611 C17orf78Q8N4C9 275 aa10.77□□□□□ -0.68
LIMK2-202ENST00000333611 GATSQ8NAP1 163 aa10.77□□□□□ -0.68
LIMK2-202ENST00000333611 ARHGDIGQ99819 225 aa10.77□□□□□ -0.68
LIMK2-202ENST00000333611 FAM117AQ9C073 453 aa10.77□□□□□ -0.68
LIMK2-202ENST00000333611 ZNF587BE7ETH6 402 aa10.77□□□□□ -0.69
LIMK2-202ENST00000333611 RNH1P13489 461 aaKnown RBP10.77□□□□□ -0.69
LIMK2-202ENST00000333611 CALCRP30988 508 aa10.77□□□□□ -0.69
LIMK2-202ENST00000333611 RPS27P42677 84 aaKnown RBP10.77□□□□□ -0.69
LIMK2-202ENST00000333611 SRSF5Q13243 272 aaKnown RBP10.77□□□□□ -0.69
LIMK2-202ENST00000333611 ZNF77Q15935 545 aa10.77□□□□□ -0.69
LIMK2-202ENST00000333611 CLEC12BQ2HXU8 276 aa10.77□□□□□ -0.69
LIMK2-202ENST00000333611 MFSD12Q6NUT3 480 aa10.77□□□□□ -0.69
LIMK2-202ENST00000333611 ZNF343Q6P1L6 599 aa10.77□□□□□ -0.69
LIMK2-202ENST00000333611 SPNS3Q6ZMD2 512 aa10.77□□□□□ -0.69
LIMK2-202ENST00000333611 OR51D1Q8NGF3 324 aa10.77□□□□□ -0.69
LIMK2-202ENST00000333611 ZBP1Q9H171 429 aa10.77□□□□□ -0.69
LIMK2-202ENST00000333611 PTGES2Q9H7Z7 377 aa10.77□□□□□ -0.69
LIMK2-202ENST00000333611 MTHFD2LQ9H903 347 aaPredicted RBP10.77□□□□□ -0.69
LIMK2-202ENST00000333611 CREBZFQ9NS37 354 aa10.77□□□□□ -0.69
LIMK2-202ENST00000333611 STARD5Q9NSY2 213 aa10.77□□□□□ -0.69
LIMK2-202ENST00000333611 INSL6Q9Y581 213 aa10.77□□□□□ -0.69
LIMK2-202ENST00000333611 EDDM13A0A1B0GTR0 161 aa10.77□□□□□ -0.69
LIMK2-202ENST00000333611 DUXAA6NLW8 204 aa10.77□□□□□ -0.69
LIMK2-202ENST00000333611 SULT1A1P50225 295 aa10.77□□□□□ -0.69
LIMK2-202ENST00000333611 RAP1AP62834 184 aa10.77□□□□□ -0.69
LIMK2-202ENST00000333611 RNF113BQ8IZP6 322 aaKnown RBP10.77□□□□□ -0.69
LIMK2-202ENST00000333611 OR14C36Q8NHC7 312 aa10.77□□□□□ -0.69
LIMK2-202ENST00000333611 GPR148Q8TDV2 347 aa10.77□□□□□ -0.69
LIMK2-202ENST00000333611 MRPL37Q9BZE1 423 aaKnown RBP10.77□□□□□ -0.69
LIMK2-202ENST00000333611 MMP26Q9NRE1 261 aa10.77□□□□□ -0.69
LIMK2-202ENST00000333611 ZMIZ1Q9ULJ6 1067 aa10.77□□□□□ -0.69
LIMK2-202ENST00000333611 EXOGQ9Y2C4 368 aaKnown RBP10.77□□□□□ -0.69
LIMK2-202ENST00000333611 IER3IP1Q9Y5U9 82 aa10.77□□□□□ -0.69
LIMK2-202ENST00000333611 NPFFR2Q9Y5X5 522 aa10.77□□□□□ -0.69
LIMK2-202ENST00000333611 A0A0G2JK05 382 aa10.76□□□□□ -0.69
LIMK2-202ENST00000333611 CYB5BO43169 146 aa10.76□□□□□ -0.69
LIMK2-202ENST00000333611 EFEMP2O95967 443 aa10.76□□□□□ -0.69
LIMK2-202ENST00000333611 RCC1P18754 421 aaPredicted RBP10.76□□□□□ -0.69
LIMK2-202ENST00000333611 MAP3K8P41279 467 aa10.76□□□□□ -0.69
LIMK2-202ENST00000333611 DHPSP49366 369 aaPredicted RBP10.76□□□□□ -0.69
LIMK2-202ENST00000333611 OR2L3Q8NG85 312 aa10.76□□□□□ -0.69
LIMK2-202ENST00000333611 OR4K14Q8NGD5 310 aa10.76□□□□□ -0.69
LIMK2-202ENST00000333611 METTL8Q9H825 291 aaKnown RBP10.76□□□□□ -0.69
LIMK2-202ENST00000333611 SEC61A2Q9H9S3 476 aa10.76□□□□□ -0.69
LIMK2-202ENST00000333611 UPB1Q9UBR1 384 aa10.76□□□□□ -0.69
LIMK2-202ENST00000333611 V9GY05 133 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms