RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 OR2H1Q9GZK4 316 aa12.11□□□□□ -0.47
LIMS1-201ENST00000332345 BARX1Q9HBU1 254 aaPredicted RBP12.11□□□□□ -0.47
LIMS1-201ENST00000332345 ARMC1Q9NVT9 282 aa12.11□□□□□ -0.47
LIMS1-201ENST00000332345 ARFGEF3Q5TH69 2177 aa12.11□□□□□ -0.47
LIMS1-201ENST00000332345 CELSR1Q9NYQ6 3014 aa12.11□□□□□ -0.47
LIMS1-201ENST00000332345 H3BN98 237 aa12.1□□□□□ -0.47
LIMS1-201ENST00000332345 SNAP29O95721 258 aa12.1□□□□□ -0.47
LIMS1-201ENST00000332345 SCG5P05408 212 aa12.1□□□□□ -0.47
LIMS1-201ENST00000332345 CD99P14209 185 aa12.1□□□□□ -0.47
LIMS1-201ENST00000332345 FASP25445 335 aa12.1□□□□□ -0.47
LIMS1-201ENST00000332345 PCSK6P29122 969 aa12.1□□□□□ -0.47
LIMS1-201ENST00000332345 EVX1P49640 407 aa12.1□□□□□ -0.47
LIMS1-201ENST00000332345 GDI2P50395 445 aaKnown RBP12.1□□□□□ -0.47
LIMS1-201ENST00000332345 GLO1Q04760 184 aa12.1□□□□□ -0.47
LIMS1-201ENST00000332345 SCRN3Q0VDG4 424 aa12.1□□□□□ -0.47
LIMS1-201ENST00000332345 ENDOGQ14249 297 aaKnown RBP12.1□□□□□ -0.47
LIMS1-201ENST00000332345 EFNB3Q15768 340 aa12.1□□□□□ -0.47
LIMS1-201ENST00000332345 KCNMB1Q16558 191 aa12.1□□□□□ -0.47
LIMS1-201ENST00000332345 SHQ1Q6PI26 577 aaKnown RBP12.1□□□□□ -0.47
LIMS1-201ENST00000332345 UGT2A3Q6UWM9 527 aa12.1□□□□□ -0.47
LIMS1-201ENST00000332345 C10orf67Q8IYJ2 551 aa12.1□□□□□ -0.47
LIMS1-201ENST00000332345 OR6V1Q8N148 313 aa12.1□□□□□ -0.47
LIMS1-201ENST00000332345 ATG16L2Q8NAA4 619 aa12.1□□□□□ -0.47
LIMS1-201ENST00000332345 NPEPL1Q8NDH3 523 aa12.1□□□□□ -0.47
LIMS1-201ENST00000332345 CPEB3Q8NE35 698 aaKnown RBP12.1□□□□□ -0.47
LIMS1-201ENST00000332345 WFDC11Q8NEX6 87 aa12.1□□□□□ -0.47
LIMS1-201ENST00000332345 AKR7LQ8NHP1 331 aa12.1□□□□□ -0.47
LIMS1-201ENST00000332345 TEX47Q8TBZ9 253 aa12.1□□□□□ -0.47
LIMS1-201ENST00000332345 UTP4Q969X6 686 aaKnown RBP12.1□□□□□ -0.47
LIMS1-201ENST00000332345 DUS3LQ96G46 650 aaKnown RBP12.1□□□□□ -0.47
LIMS1-201ENST00000332345 FOXN4Q96NZ1 517 aa12.1□□□□□ -0.47
LIMS1-201ENST00000332345 TSSK2Q96PF2 358 aa12.1□□□□□ -0.47
LIMS1-201ENST00000332345 PLA2G12AQ9BZM1 189 aa12.1□□□□□ -0.47
LIMS1-201ENST00000332345 PLK3Q9H4B4 646 aa12.1□□□□□ -0.47
LIMS1-201ENST00000332345 EMC7Q9NPA0 242 aa12.1□□□□□ -0.47
LIMS1-201ENST00000332345 RPRD1BQ9NQG5 326 aaKnown RBP12.1□□□□□ -0.47
LIMS1-201ENST00000332345 EIF3KQ9UBQ5 218 aaKnown RBP12.1□□□□□ -0.47
LIMS1-201ENST00000332345 KLHL21Q9UJP4 597 aa12.1□□□□□ -0.47
LIMS1-201ENST00000332345 FKBP7Q9Y680 259 aa12.1□□□□□ -0.47
LIMS1-201ENST00000332345 ZNF469Q96JG9 3925 aaPredicted RBP12.09□□□□□ -0.47
LIMS1-201ENST00000332345 IGLV1-36A0A0B4J1U3 117 aa12.09□□□□□ -0.47
LIMS1-201ENST00000332345 C5orf49A4QMS7 147 aa12.09□□□□□ -0.47
LIMS1-201ENST00000332345 OR6C68A6NDL8 312 aa12.09□□□□□ -0.47
LIMS1-201ENST00000332345 H7C417 338 aa12.09□□□□□ -0.47
LIMS1-201ENST00000332345 SOX14O95416 240 aa12.09□□□□□ -0.47
LIMS1-201ENST00000332345 IFNGP01579 166 aa12.09□□□□□ -0.47
LIMS1-201ENST00000332345 IGFBP1P08833 259 aaPredicted RBP12.09□□□□□ -0.47
LIMS1-201ENST00000332345 FCGR1AP12314 374 aa12.09□□□□□ -0.47
LIMS1-201ENST00000332345 CCL2P13500 99 aa12.09□□□□□ -0.47
LIMS1-201ENST00000332345 PRKACGP22612 351 aa12.09□□□□□ -0.47
LIMS1-201ENST00000332345 CCNOP22674 350 aa12.09□□□□□ -0.47
LIMS1-201ENST00000332345 UCP2P55851 309 aa12.09□□□□□ -0.47
LIMS1-201ENST00000332345 SELENOVP59797 346 aa12.09□□□□□ -0.47
LIMS1-201ENST00000332345 AQP6Q13520 282 aa12.09□□□□□ -0.47
LIMS1-201ENST00000332345 CCNIQ14094 377 aa12.09□□□□□ -0.47
LIMS1-201ENST00000332345 SLC36A3Q495N2 470 aa12.09□□□□□ -0.47
LIMS1-201ENST00000332345 ARL9Q6T311 187 aa12.09□□□□□ -0.47
LIMS1-201ENST00000332345 ZBTB46Q86UZ6 589 aa12.09□□□□□ -0.47
LIMS1-201ENST00000332345 C1orf174Q8IYL3 243 aa12.09□□□□□ -0.47
LIMS1-201ENST00000332345 SDR9C7Q8NEX9 313 aa12.09□□□□□ -0.47
LIMS1-201ENST00000332345 OR8D4Q8NGM9 314 aa12.09□□□□□ -0.47
LIMS1-201ENST00000332345 DNAJC9Q8WXX5 260 aa12.09□□□□□ -0.47
LIMS1-201ENST00000332345 C11orf40Q8WZ69 217 aa12.09□□□□□ -0.47
LIMS1-201ENST00000332345 POM121L2Q96KW2 1035 aa12.09□□□□□ -0.47
LIMS1-201ENST00000332345 TMUB1Q9BVT8 246 aa12.09□□□□□ -0.47
LIMS1-201ENST00000332345 CDADC1Q9BWV3 514 aa12.09□□□□□ -0.47
LIMS1-201ENST00000332345 BCL2L14Q9BZR8 327 aa12.09□□□□□ -0.47
LIMS1-201ENST00000332345 RACGAP1Q9H0H5 632 aa12.09□□□□□ -0.47
LIMS1-201ENST00000332345 WNT5BQ9H1J7 359 aa12.09□□□□□ -0.47
LIMS1-201ENST00000332345 F8P00451 2351 aa12.09□□□□□ -0.47
LIMS1-201ENST00000332345 HIVEP1P15822 2718 aa12.08□□□□□ -0.48
LIMS1-201ENST00000332345 DCTN6O00399 190 aa12.08□□□□□ -0.48
LIMS1-201ENST00000332345 SGCEO43556 437 aa12.08□□□□□ -0.48
LIMS1-201ENST00000332345 MPZL1O95297 269 aa12.08□□□□□ -0.48
LIMS1-201ENST00000332345 HLA-DQA2P01906 255 aa12.08□□□□□ -0.48
LIMS1-201ENST00000332345 TP53P04637 393 aaPredicted RBP12.08□□□□□ -0.48
LIMS1-201ENST00000332345 COX5BP10606 129 aa12.08□□□□□ -0.48
LIMS1-201ENST00000332345 OSMP13725 252 aa12.08□□□□□ -0.48
LIMS1-201ENST00000332345 FOSL1P15407 271 aa12.08□□□□□ -0.48
LIMS1-201ENST00000332345 POU1F1P28069 291 aa12.08□□□□□ -0.48
LIMS1-201ENST00000332345 ATP6AP1Q15904 470 aa12.08□□□□□ -0.48
LIMS1-201ENST00000332345 ZNF362Q5T0B9 420 aaPredicted RBP12.08□□□□□ -0.48
LIMS1-201ENST00000332345 RGS7BPQ6MZT1 257 aaPredicted RBP12.08□□□□□ -0.48
LIMS1-201ENST00000332345 ZNF774Q6NX45 483 aa12.08□□□□□ -0.48
LIMS1-201ENST00000332345 HIPK1Q86Z02 1210 aa12.08□□□□□ -0.48
LIMS1-201ENST00000332345 KRTAP1-3Q8IUG1 177 aa12.08□□□□□ -0.48
LIMS1-201ENST00000332345 HS3ST5Q8IZT8 346 aa12.08□□□□□ -0.48
LIMS1-201ENST00000332345 PAQR4Q8N4S7 273 aaPredicted RBP12.08□□□□□ -0.48
LIMS1-201ENST00000332345 GJC3Q8NFK1 279 aa12.08□□□□□ -0.48
LIMS1-201ENST00000332345 OR10H5Q8NGA6 315 aa12.08□□□□□ -0.48
LIMS1-201ENST00000332345 OR2T4Q8NH00 348 aa12.08□□□□□ -0.48
LIMS1-201ENST00000332345 OR5K1Q8NHB7 308 aa12.08□□□□□ -0.48
LIMS1-201ENST00000332345 MRPL24Q96A35 216 aaKnown RBP12.08□□□□□ -0.48
LIMS1-201ENST00000332345 Q96MF0 132 aa12.08□□□□□ -0.48
LIMS1-201ENST00000332345 DDOQ99489 341 aa12.08□□□□□ -0.48
LIMS1-201ENST00000332345 DOK1Q99704 481 aa12.08□□□□□ -0.48
LIMS1-201ENST00000332345 TEX12Q9BXU0 123 aa12.08□□□□□ -0.48
LIMS1-201ENST00000332345 ELOVL3Q9HB03 270 aa12.08□□□□□ -0.48
LIMS1-201ENST00000332345 NTN4Q9HB63 628 aa12.08□□□□□ -0.48
LIMS1-201ENST00000332345 KIF17Q9P2E2 1029 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms