RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 HLA-DQA2P01906 255 aa13.03□□□□□ -0.32
SNX20-202ENST00000330943 SLC35E2P0CK97 266 aa13.03□□□□□ -0.32
SNX20-202ENST00000330943 HOXB1P14653 301 aaPredicted RBP13.03□□□□□ -0.32
SNX20-202ENST00000330943 CFPP27918 469 aa13.03□□□□□ -0.32
SNX20-202ENST00000330943 HTR2CP28335 458 aa13.03□□□□□ -0.32
SNX20-202ENST00000330943 RPS21P63220 83 aaKnown RBP13.03□□□□□ -0.32
SNX20-202ENST00000330943 ADAM8P78325 824 aa13.03□□□□□ -0.32
SNX20-202ENST00000330943 GPR18Q14330 331 aa13.03□□□□□ -0.32
SNX20-202ENST00000330943 MEP1BQ16820 701 aa13.03□□□□□ -0.32
SNX20-202ENST00000330943 MICBQ29980 383 aa13.03□□□□□ -0.32
SNX20-202ENST00000330943 MOGAT2Q3SYC2 334 aa13.03□□□□□ -0.32
SNX20-202ENST00000330943 LYG2Q86SG7 212 aa13.03□□□□□ -0.32
SNX20-202ENST00000330943 VSTM2LQ96N03 204 aa13.03□□□□□ -0.32
SNX20-202ENST00000330943 ELF4Q99607 663 aaPredicted RBP13.03□□□□□ -0.32
SNX20-202ENST00000330943 EDEM2Q9BV94 578 aa13.03□□□□□ -0.32
SNX20-202ENST00000330943 CST11Q9H112 138 aa13.03□□□□□ -0.32
SNX20-202ENST00000330943 ZMAT5Q9UDW3 170 aaKnown RBP13.03□□□□□ -0.32
SNX20-202ENST00000330943 TMEM14AQ9Y6G1 99 aa13.03□□□□□ -0.32
SNX20-202ENST00000330943 ATXN8OSP0DMR3 200 aa13.03□□□□□ -0.32
SNX20-202ENST00000330943 CENPAP49450 140 aa13.03□□□□□ -0.32
SNX20-202ENST00000330943 CXADRP78310 365 aa13.03□□□□□ -0.32
SNX20-202ENST00000330943 RPL18Q07020 188 aaKnown RBP13.03□□□□□ -0.32
SNX20-202ENST00000330943 FAM78AQ5JUQ0 283 aa13.03□□□□□ -0.32
SNX20-202ENST00000330943 FAM166AQ6J272 317 aa13.03□□□□□ -0.32
SNX20-202ENST00000330943 PAPD4Q6PIY7 484 aaKnown RBP13.03□□□□□ -0.32
SNX20-202ENST00000330943 ZNF813Q6ZN06 617 aa13.03□□□□□ -0.32
SNX20-202ENST00000330943 KCTD9Q7L273 389 aa13.03□□□□□ -0.32
SNX20-202ENST00000330943 ZNF584Q8IVC4 421 aa13.03□□□□□ -0.32
SNX20-202ENST00000330943 OR5AP2Q8NGF4 316 aa13.03□□□□□ -0.32
SNX20-202ENST00000330943 ARL11Q969Q4 196 aa13.03□□□□□ -0.32
SNX20-202ENST00000330943 CMKLR1Q99788 373 aa13.03□□□□□ -0.32
SNX20-202ENST00000330943 MMP25Q9NPA2 562 aa13.03□□□□□ -0.32
SNX20-202ENST00000330943 IL23AQ9NPF7 189 aa13.03□□□□□ -0.32
SNX20-202ENST00000330943 DHDHQ9UQ10 334 aa13.03□□□□□ -0.32
SNX20-202ENST00000330943 PQLC2LA1A4F0 135 aa13.02□□□□□ -0.32
SNX20-202ENST00000330943 DCDC2BA2VCK2 349 aa13.02□□□□□ -0.32
SNX20-202ENST00000330943 TNFSF14O43557 240 aa13.02□□□□□ -0.32
SNX20-202ENST00000330943 PRKNO60260 465 aaPredicted RBP13.02□□□□□ -0.32
SNX20-202ENST00000330943 RENP00797 406 aa13.02□□□□□ -0.32
SNX20-202ENST00000330943 APEHP13798 732 aaKnown RBP13.02□□□□□ -0.32
SNX20-202ENST00000330943 PGAM2P15259 253 aa13.02□□□□□ -0.32
SNX20-202ENST00000330943 VAMP1P23763 118 aa13.02□□□□□ -0.32
SNX20-202ENST00000330943 ZBTB25P24278 435 aa13.02□□□□□ -0.32
SNX20-202ENST00000330943 ACTR1BP42025 376 aa13.02□□□□□ -0.32
SNX20-202ENST00000330943 ACTR1AP61163 376 aa13.02□□□□□ -0.32
SNX20-202ENST00000330943 S100A12P80511 92 aa13.02□□□□□ -0.32
SNX20-202ENST00000330943 PMPCAQ10713 525 aa13.02□□□□□ -0.32
SNX20-202ENST00000330943 ELOCQ15369 112 aa13.02□□□□□ -0.32
SNX20-202ENST00000330943 CDNFQ49AH0 187 aa13.02□□□□□ -0.32
SNX20-202ENST00000330943 C2orf27AQ580R0 203 aa13.02□□□□□ -0.32
SNX20-202ENST00000330943 TMEM225Q6GV28 225 aa13.02□□□□□ -0.32
SNX20-202ENST00000330943 NKD1Q969G9 470 aa13.02□□□□□ -0.32
SNX20-202ENST00000330943 Q9N2J8 555 aa13.02□□□□□ -0.32
SNX20-202ENST00000330943 TAS2R4Q9NYW5 299 aa13.02□□□□□ -0.32
SNX20-202ENST00000330943 ARID1BQ8NFD5 2236 aaPredicted RBP13.02□□□□□ -0.32
SNX20-202ENST00000330943 CPED1A4D0V7 1026 aa13.02□□□□□ -0.33
SNX20-202ENST00000330943 LINC01553A4QN01 128 aa13.02□□□□□ -0.33
SNX20-202ENST00000330943 FGF16O43320 207 aa13.02□□□□□ -0.33
SNX20-202ENST00000330943 ZNF208O43345 1280 aa13.02□□□□□ -0.33
SNX20-202ENST00000330943 SNAPINO95295 136 aa13.02□□□□□ -0.33
SNX20-202ENST00000330943 PNPP00491 289 aa13.02□□□□□ -0.33
SNX20-202ENST00000330943 CRYBA1P05813 215 aa13.02□□□□□ -0.33
SNX20-202ENST00000330943 PNLIPRP2P54317 469 aa13.02□□□□□ -0.33
SNX20-202ENST00000330943 IL13RA1P78552 427 aa13.02□□□□□ -0.33
SNX20-202ENST00000330943 GLYATL2Q8WU03 294 aa13.02□□□□□ -0.33
SNX20-202ENST00000330943 ZFP57Q9NU63 452 aa13.02□□□□□ -0.33
SNX20-202ENST00000330943 TMED7Q9Y3B3 224 aa13.02□□□□□ -0.33
SNX20-202ENST00000330943 CELSR3Q9NYQ7 3312 aa13.02□□□□□ -0.33
SNX20-202ENST00000330943 FOXS1O43638 330 aa13.02□□□□□ -0.33
SNX20-202ENST00000330943 CD74P04233 296 aa13.02□□□□□ -0.33
SNX20-202ENST00000330943 HNRNPA1P09651 372 aaKnown RBP eCLIP13.02□□□□□ -0.33
SNX20-202ENST00000330943 C5AR1P21730 350 aa13.02□□□□□ -0.33
SNX20-202ENST00000330943 DCDP81605 110 aaKnown RBP13.02□□□□□ -0.33
SNX20-202ENST00000330943 RNASE10Q5GAN6 216 aaKnown RBP13.02□□□□□ -0.33
SNX20-202ENST00000330943 TMEM240Q5SV17 173 aa13.02□□□□□ -0.33
SNX20-202ENST00000330943 AVPI1Q5T686 147 aa13.02□□□□□ -0.33
SNX20-202ENST00000330943 ACBD4Q8NC06 268 aa13.02□□□□□ -0.33
SNX20-202ENST00000330943 OTOSQ8NHW6 89 aa13.02□□□□□ -0.33
SNX20-202ENST00000330943 FAM174AQ8TBP5 190 aa13.02□□□□□ -0.33
SNX20-202ENST00000330943 RXFP4Q8TDU9 374 aa13.02□□□□□ -0.33
SNX20-202ENST00000330943 TMED6Q8WW62 240 aa13.02□□□□□ -0.33
SNX20-202ENST00000330943 OR1E3Q8WZA6 343 aa13.02□□□□□ -0.33
SNX20-202ENST00000330943 THRSPQ92748 146 aa13.02□□□□□ -0.33
SNX20-202ENST00000330943 PIK3IP1Q96FE7 263 aa13.02□□□□□ -0.33
SNX20-202ENST00000330943 CNTNAP3BQ96NU0 1288 aa13.02□□□□□ -0.33
SNX20-202ENST00000330943 PHB2Q99623 299 aa13.02□□□□□ -0.33
SNX20-202ENST00000330943 KXD1Q9BQD3 176 aa13.02□□□□□ -0.33
SNX20-202ENST00000330943 G6PC3Q9BUM1 346 aa13.02□□□□□ -0.33
SNX20-202ENST00000330943 SELENOIQ9C0D9 397 aa13.02□□□□□ -0.33
SNX20-202ENST00000330943 CKLFQ9UBR5 152 aa13.02□□□□□ -0.33
SNX20-202ENST00000330943 CARHSP1Q9Y2V2 147 aaKnown RBP13.02□□□□□ -0.33
SNX20-202ENST00000330943 MRPS18BQ9Y676 258 aaKnown RBP13.02□□□□□ -0.33
SNX20-202ENST00000330943 A0A0B4J2A0 478 aa13.01□□□□□ -0.33
SNX20-202ENST00000330943 C9orf170A2RU37 121 aa13.01□□□□□ -0.33
SNX20-202ENST00000330943 POM121BA6NF01 834 aa13.01□□□□□ -0.33
SNX20-202ENST00000330943 DOK2O60496 412 aa13.01□□□□□ -0.33
SNX20-202ENST00000330943 KAT7O95251 611 aa13.01□□□□□ -0.33
SNX20-202ENST00000330943 GLAP06280 429 aa13.01□□□□□ -0.33
SNX20-202ENST00000330943 LSSP48449 732 aa13.01□□□□□ -0.33
SNX20-202ENST00000330943 PDZK1IP1Q13113 114 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms