RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 CCDC58Q4VC31 144 aa18.07■□□□□ 0.48
RIPPLY3-201ENST00000329553 OR13C5Q8NGS8 318 aa18.07■□□□□ 0.48
RIPPLY3-201ENST00000329553 WACQ9BTA9 647 aa18.07■□□□□ 0.48
RIPPLY3-201ENST00000329553 MRPL13Q9BYD1 178 aaKnown RBP18.07■□□□□ 0.48
RIPPLY3-201ENST00000329553 HES7Q9BYE0 225 aa18.07■□□□□ 0.48
RIPPLY3-201ENST00000329553 KLHL13Q9P2N7 655 aa18.07■□□□□ 0.48
RIPPLY3-201ENST00000329553 TMEM14AQ9Y6G1 99 aa18.07■□□□□ 0.48
RIPPLY3-201ENST00000329553 A0A0G2JK05 382 aa18.07■□□□□ 0.48
RIPPLY3-201ENST00000329553 ANKRD34BA5PLL1 514 aa18.07■□□□□ 0.48
RIPPLY3-201ENST00000329553 TRAPPC6AO75865 159 aa18.07■□□□□ 0.48
RIPPLY3-201ENST00000329553 ABHD16AO95870 558 aa18.07■□□□□ 0.48
RIPPLY3-201ENST00000329553 EIF4EP06730 217 aaKnown RBP18.07■□□□□ 0.48
RIPPLY3-201ENST00000329553 ARSBP15848 533 aa18.07■□□□□ 0.48
RIPPLY3-201ENST00000329553 PTGS2P35354 604 aa18.07■□□□□ 0.48
RIPPLY3-201ENST00000329553 FAPQ12884 760 aa18.07■□□□□ 0.48
RIPPLY3-201ENST00000329553 OR1C1Q15619 314 aa18.07■□□□□ 0.48
RIPPLY3-201ENST00000329553 FAM27D1Q5T7N8 215 aa18.07■□□□□ 0.48
RIPPLY3-201ENST00000329553 LIPNQ5VXI9 398 aa18.07■□□□□ 0.48
RIPPLY3-201ENST00000329553 ZNF57Q68EA5 555 aaPredicted RBP18.07■□□□□ 0.48
RIPPLY3-201ENST00000329553 SFXN4Q6P4A7 337 aa18.07■□□□□ 0.48
RIPPLY3-201ENST00000329553 MS4A15Q8N5U1 240 aa18.07■□□□□ 0.48
RIPPLY3-201ENST00000329553 OR4M1Q8NGD0 313 aa18.07■□□□□ 0.48
RIPPLY3-201ENST00000329553 CREB3L1Q96BA8 519 aa18.07■□□□□ 0.48
RIPPLY3-201ENST00000329553 TRAF4Q9BUZ4 470 aaPredicted RBP18.07■□□□□ 0.48
RIPPLY3-201ENST00000329553 CELSR3Q9NYQ7 3312 aa18.06■□□□□ 0.48
RIPPLY3-201ENST00000329553 CACNA1CQ13936 2221 aa18.06■□□□□ 0.48
RIPPLY3-201ENST00000329553 LOC102725191A0A1B0GVB3 256 aa18.06■□□□□ 0.48
RIPPLY3-201ENST00000329553 ARGFXA6NJG6 315 aa18.06■□□□□ 0.48
RIPPLY3-201ENST00000329553 H0YC42 278 aa18.06■□□□□ 0.48
RIPPLY3-201ENST00000329553 UPK3AO75631 287 aa18.06■□□□□ 0.48
RIPPLY3-201ENST00000329553 RPP14O95059 124 aaKnown RBP18.06■□□□□ 0.48
RIPPLY3-201ENST00000329553 TACSTD2P09758 323 aa18.06■□□□□ 0.48
RIPPLY3-201ENST00000329553 ZNF43P17038 809 aa18.06■□□□□ 0.48
RIPPLY3-201ENST00000329553 NPR2P20594 1047 aa18.06■□□□□ 0.48
RIPPLY3-201ENST00000329553 SLC6A1P30531 599 aa18.06■□□□□ 0.48
RIPPLY3-201ENST00000329553 GZMKP49863 264 aa18.06■□□□□ 0.48
RIPPLY3-201ENST00000329553 AGFG1P52594 562 aaKnown RBP18.06■□□□□ 0.48
RIPPLY3-201ENST00000329553 NANOS3P60323 173 aaKnown RBP18.06■□□□□ 0.48
RIPPLY3-201ENST00000329553 CAMK2DQ13557 499 aa18.06■□□□□ 0.48
RIPPLY3-201ENST00000329553 TMPRSS7Q7RTY8 843 aa18.06■□□□□ 0.48
RIPPLY3-201ENST00000329553 CEACAM19Q7Z692 300 aa18.06■□□□□ 0.48
RIPPLY3-201ENST00000329553 ZFAND1Q8TCF1 268 aa18.06■□□□□ 0.48
RIPPLY3-201ENST00000329553 TRIM63Q969Q1 353 aa18.06■□□□□ 0.48
RIPPLY3-201ENST00000329553 PDCD1LG2Q9BQ51 273 aa18.06■□□□□ 0.48
RIPPLY3-201ENST00000329553 NIPAL2Q9H841 368 aa18.06■□□□□ 0.48
RIPPLY3-201ENST00000329553 IKZF2Q9UKS7 526 aa18.06■□□□□ 0.48
RIPPLY3-201ENST00000329553 RASD1Q9Y272 281 aa18.06■□□□□ 0.48
RIPPLY3-201ENST00000329553 TNFSF11O14788 317 aa18.06■□□□□ 0.48
RIPPLY3-201ENST00000329553 LIPCP11150 499 aa18.06■□□□□ 0.48
RIPPLY3-201ENST00000329553 GDF1P27539 372 aa18.06■□□□□ 0.48
RIPPLY3-201ENST00000329553 OR10A3P58181 314 aa18.06■□□□□ 0.48
RIPPLY3-201ENST00000329553 RRAS2P62070 204 aaPredicted RBP18.06■□□□□ 0.48
RIPPLY3-201ENST00000329553 ADAM8P78325 824 aa18.06■□□□□ 0.48
RIPPLY3-201ENST00000329553 ACSM3Q53FZ2 586 aa18.06■□□□□ 0.48
RIPPLY3-201ENST00000329553 WIPI1Q5MNZ9 446 aaPredicted RBP18.06■□□□□ 0.48
RIPPLY3-201ENST00000329553 DNM1P34Q6PK57 102 aa18.06■□□□□ 0.48
RIPPLY3-201ENST00000329553 LRRC69Q6ZNQ3 347 aa18.06■□□□□ 0.48
RIPPLY3-201ENST00000329553 ASCL5Q7RTU5 278 aa18.06■□□□□ 0.48
RIPPLY3-201ENST00000329553 GALNT16Q8N428 558 aa18.06■□□□□ 0.48
RIPPLY3-201ENST00000329553 OR2M7Q8NG81 312 aa18.06■□□□□ 0.48
RIPPLY3-201ENST00000329553 HSD17B8Q92506 261 aa18.06■□□□□ 0.48
RIPPLY3-201ENST00000329553 FAM173AQ9BQD7 235 aa18.06■□□□□ 0.48
RIPPLY3-201ENST00000329553 MRPS18CQ9Y3D5 142 aaKnown RBP18.06■□□□□ 0.48
RIPPLY3-201ENST00000329553 IGHV3-15A0A0B4J1V0 119 aa18.05■□□□□ 0.48
RIPPLY3-201ENST00000329553 LANCL1O43813 399 aa18.05■□□□□ 0.48
RIPPLY3-201ENST00000329553 C1QBP02746 253 aa18.05■□□□□ 0.48
RIPPLY3-201ENST00000329553 CD1AP06126 327 aa18.05■□□□□ 0.48
RIPPLY3-201ENST00000329553 SPARCP09486 303 aa18.05■□□□□ 0.48
RIPPLY3-201ENST00000329553 TALDO1P37837 337 aa18.05■□□□□ 0.48
RIPPLY3-201ENST00000329553 EGR3Q06889 387 aa18.05■□□□□ 0.48
RIPPLY3-201ENST00000329553 GPR176Q14439 515 aa18.05■□□□□ 0.48
RIPPLY3-201ENST00000329553 IGF2-ASQ6U949 168 aa18.05■□□□□ 0.48
RIPPLY3-201ENST00000329553 SAMD12Q8N8I0 201 aa18.05■□□□□ 0.48
RIPPLY3-201ENST00000329553 SLC26A10Q8NG04 563 aa18.05■□□□□ 0.48
RIPPLY3-201ENST00000329553 RPS4Y2Q8TD47 263 aa18.05■□□□□ 0.48
RIPPLY3-201ENST00000329553 SLC25A44Q96H78 314 aaPredicted RBP18.05■□□□□ 0.48
RIPPLY3-201ENST00000329553 RBP7Q96R05 134 aa18.05■□□□□ 0.48
RIPPLY3-201ENST00000329553 UCN2Q96RP3 112 aa18.05■□□□□ 0.48
RIPPLY3-201ENST00000329553 THAP7Q9BT49 309 aaPredicted RBP18.05■□□□□ 0.48
RIPPLY3-201ENST00000329553 HDHD2Q9H0R4 259 aa18.05■□□□□ 0.48
RIPPLY3-201ENST00000329553 DLL3Q9NYJ7 618 aa18.05■□□□□ 0.48
RIPPLY3-201ENST00000329553 BOKQ9UMX3 212 aaPredicted RBP18.05■□□□□ 0.48
RIPPLY3-201ENST00000329553 INMT-MINDY4F8WBC2 141 aa18.04■□□□□ 0.48
RIPPLY3-201ENST00000329553 NKX2-8O15522 239 aa18.04■□□□□ 0.48
RIPPLY3-201ENST00000329553 KHDRBS3O75525 346 aaKnown RBP18.04■□□□□ 0.48
RIPPLY3-201ENST00000329553 PITPNBP48739 271 aa18.04■□□□□ 0.48
RIPPLY3-201ENST00000329553 RPS11P62280 158 aaKnown RBP eCLIP18.04■□□□□ 0.48
RIPPLY3-201ENST00000329553 CSNK2A1P68400 391 aaPredicted RBP18.04■□□□□ 0.48
RIPPLY3-201ENST00000329553 TNK1Q13470 666 aa18.04■□□□□ 0.48
RIPPLY3-201ENST00000329553 C1QTNF12Q5T7M4 302 aa18.04■□□□□ 0.48
RIPPLY3-201ENST00000329553 FAM220AQ7Z4H9 259 aa18.04■□□□□ 0.48
RIPPLY3-201ENST00000329553 SULF2Q8IWU5 870 aa18.04■□□□□ 0.48
RIPPLY3-201ENST00000329553 TEX19Q8NA77 164 aa18.04■□□□□ 0.48
RIPPLY3-201ENST00000329553 NSMAFQ92636 917 aa18.04■□□□□ 0.48
RIPPLY3-201ENST00000329553 RFT1Q96AA3 541 aa18.04■□□□□ 0.48
RIPPLY3-201ENST00000329553 GON7Q9BXV9 100 aa18.04■□□□□ 0.48
RIPPLY3-201ENST00000329553 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.04■□□□□ 0.48
RIPPLY3-201ENST00000329553 SLCO1C1Q9NYB5 712 aa18.04■□□□□ 0.48
RIPPLY3-201ENST00000329553 GJE1A6NN92 205 aa18.04■□□□□ 0.48
RIPPLY3-201ENST00000329553 PHYHO14832 338 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms