RNA–Protein interactions for RNA: ENST00000321358.11

YBX1-201, Transcript of Y-box binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YBX1, Length 1,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-201ENST00000321358 ARPC4-TTLL3A0A0A6YYG9 625 aa18.5■□□□□ 0.55
YBX1-201ENST00000321358 HLA-HP01893 362 aa18.5■□□□□ 0.55
YBX1-201ENST00000321358 SPARCP09486 303 aa18.5■□□□□ 0.55
YBX1-201ENST00000321358 NUDT6P53370 316 aa18.5■□□□□ 0.55
YBX1-201ENST00000321358 SRSF1Q07955 248 aaKnown RBP eCLIP18.5■□□□□ 0.55
YBX1-201ENST00000321358 SCRN3Q0VDG4 424 aa18.5■□□□□ 0.55
YBX1-201ENST00000321358 GGTLC2Q14390 218 aa18.5■□□□□ 0.55
YBX1-201ENST00000321358 KLHL22Q53GT1 634 aa18.5■□□□□ 0.55
YBX1-201ENST00000321358 UGT2A3Q6UWM9 527 aa18.5■□□□□ 0.55
YBX1-201ENST00000321358 LYPD4Q6UWN0 246 aa18.5■□□□□ 0.55
YBX1-201ENST00000321358 SLC16A9Q7RTY1 509 aa18.5■□□□□ 0.55
YBX1-201ENST00000321358 OR51G2Q8NGK0 314 aa18.5■□□□□ 0.55
YBX1-201ENST00000321358 FBLIM1Q8WUP2 373 aa18.5■□□□□ 0.55
YBX1-201ENST00000321358 RNFT2Q96EX2 444 aa18.5■□□□□ 0.55
YBX1-201ENST00000321358 MARCH7Q9H992 704 aa18.5■□□□□ 0.55
YBX1-201ENST00000321358 AMBNQ9NP70 447 aa18.5■□□□□ 0.55
YBX1-201ENST00000321358 ASH2LQ9UBL3 628 aa18.5■□□□□ 0.55
YBX1-201ENST00000321358 LRRC42Q9Y546 428 aa18.5■□□□□ 0.55
YBX1-201ENST00000321358 PCDHGB1Q9Y5G3 927 aa18.5■□□□□ 0.55
YBX1-201ENST00000321358 TIMM10BQ9Y5J6 103 aa18.5■□□□□ 0.55
YBX1-201ENST00000321358 TUBAL3A6NHL2 446 aa18.49■□□□□ 0.55
YBX1-201ENST00000321358 RAB36O95755 333 aa18.49■□□□□ 0.55
YBX1-201ENST00000321358 SCG5P05408 212 aa18.49■□□□□ 0.55
YBX1-201ENST00000321358 MRPL3P09001 348 aaKnown RBP18.49■□□□□ 0.55
YBX1-201ENST00000321358 CCKARP32238 428 aa18.49■□□□□ 0.55
YBX1-201ENST00000321358 NAA10P41227 235 aaPredicted RBP18.49■□□□□ 0.55
YBX1-201ENST00000321358 PLP2Q04941 152 aa18.49■□□□□ 0.55
YBX1-201ENST00000321358 ZNF91Q05481 1191 aa18.49■□□□□ 0.55
YBX1-201ENST00000321358 PIGFQ07326 219 aa18.49■□□□□ 0.55
YBX1-201ENST00000321358 PPA1Q15181 289 aa18.49■□□□□ 0.55
YBX1-201ENST00000321358 SMN1Q16637 294 aaKnown RBP18.49■□□□□ 0.55
YBX1-201ENST00000321358 GSG1Q2KHT4 349 aa18.49■□□□□ 0.55
YBX1-201ENST00000321358 TEX30Q5JUR7 227 aa18.49■□□□□ 0.55
YBX1-201ENST00000321358 C6orf141Q5SZD1 244 aa18.49■□□□□ 0.55
YBX1-201ENST00000321358 ALKBH2Q6NS38 261 aa18.49■□□□□ 0.55
YBX1-201ENST00000321358 TIGD4Q8IY51 512 aa18.49■□□□□ 0.55
YBX1-201ENST00000321358 ALDH16A1Q8IZ83 802 aa18.49■□□□□ 0.55
YBX1-201ENST00000321358 GJC3Q8NFK1 279 aa18.49■□□□□ 0.55
YBX1-201ENST00000321358 BPIFB6Q8NFQ5 453 aa18.49■□□□□ 0.55
YBX1-201ENST00000321358 YIPF3Q9GZM5 350 aa18.49■□□□□ 0.55
YBX1-201ENST00000321358 NGBQ9NPG2 151 aa18.49■□□□□ 0.55
YBX1-201ENST00000321358 SCN3BQ9NY72 215 aa18.49■□□□□ 0.55
YBX1-201ENST00000321358 TMEM14AQ9Y6G1 99 aa18.49■□□□□ 0.55
YBX1-201ENST00000321358 FLNBO75369 2602 aaKnown RBP18.49■□□□□ 0.55
YBX1-201ENST00000321358 A0A1W2PR80 420 aa18.49■□□□□ 0.55
YBX1-201ENST00000321358 IRGMA1A4Y4 181 aa18.49■□□□□ 0.55
YBX1-201ENST00000321358 CLEC18AA5D8T8 446 aa18.49■□□□□ 0.55
YBX1-201ENST00000321358 DBTP11182 482 aaKnown RBP18.49■□□□□ 0.55
YBX1-201ENST00000321358 GRNP28799 593 aaKnown RBP18.49■□□□□ 0.55
YBX1-201ENST00000321358 RAB1AP62820 205 aa18.49■□□□□ 0.55
YBX1-201ENST00000321358 ENDOGQ14249 297 aaKnown RBP18.49■□□□□ 0.55
YBX1-201ENST00000321358 OTPQ5XKR4 325 aa18.49■□□□□ 0.55
YBX1-201ENST00000321358 CLEC18BQ6UXF7 455 aa18.49■□□□□ 0.55
YBX1-201ENST00000321358 DPY19L4Q7Z388 723 aa18.49■□□□□ 0.55
YBX1-201ENST00000321358 ZNF454Q8N9F8 522 aa18.49■□□□□ 0.55
YBX1-201ENST00000321358 CLEC18CQ8NCF0 446 aa18.49■□□□□ 0.55
YBX1-201ENST00000321358 CYB5R1Q9UHQ9 305 aa18.49■□□□□ 0.55
YBX1-201ENST00000321358 FBXL3Q9UKT7 428 aa18.49■□□□□ 0.55
YBX1-201ENST00000321358 SELENOFO60613 162 aa18.48■□□□□ 0.55
YBX1-201ENST00000321358 FADS2O95864 444 aaKnown RBP18.48■□□□□ 0.55
YBX1-201ENST00000321358 SBK2P0C263 348 aa18.48■□□□□ 0.55
YBX1-201ENST00000321358 CXCR4P61073 352 aa18.48■□□□□ 0.55
YBX1-201ENST00000321358 TUBA1BP68363 451 aa18.48■□□□□ 0.55
YBX1-201ENST00000321358 TUBA4AP68366 448 aa18.48■□□□□ 0.55
YBX1-201ENST00000321358 TAB1Q15750 504 aa18.48■□□□□ 0.55
YBX1-201ENST00000321358 TUBA1AQ71U36 451 aa18.48■□□□□ 0.55
YBX1-201ENST00000321358 WDR31Q8NA23 367 aa18.48■□□□□ 0.55
YBX1-201ENST00000321358 FBXO17Q96EF6 278 aa18.48■□□□□ 0.55
YBX1-201ENST00000321358 MNTQ99583 582 aa18.48■□□□□ 0.55
YBX1-201ENST00000321358 LAMP5Q9UJQ1 280 aa18.48■□□□□ 0.55
YBX1-201ENST00000321358 SLC25A15Q9Y619 301 aa18.48■□□□□ 0.55
YBX1-201ENST00000321358 SPTBN1Q01082 2364 aaKnown RBP18.47■□□□□ 0.55
YBX1-201ENST00000321358 DOPEY1Q5JWR5 2465 aa18.47■□□□□ 0.55
YBX1-201ENST00000321358 EFCAB10A6NFE3 127 aa18.47■□□□□ 0.55
YBX1-201ENST00000321358 CASKO14936 926 aa18.47■□□□□ 0.55
YBX1-201ENST00000321358 FAM20BO75063 409 aa18.47■□□□□ 0.55
YBX1-201ENST00000321358 PTHP01270 115 aa18.47■□□□□ 0.55
YBX1-201ENST00000321358 PATE4P0C8F1 98 aa18.47■□□□□ 0.55
YBX1-201ENST00000321358 RNF224P0DH78 156 aa18.47■□□□□ 0.55
YBX1-201ENST00000321358 ZNF32P17041 273 aa18.47■□□□□ 0.55
YBX1-201ENST00000321358 RAB40BQ12829 278 aa18.47■□□□□ 0.55
YBX1-201ENST00000321358 SLC18B1Q6NT16 456 aa18.47■□□□□ 0.55
YBX1-201ENST00000321358 MDP1Q86V88 176 aa18.47■□□□□ 0.55
YBX1-201ENST00000321358 LINC00346Q8IVM7 164 aa18.47■□□□□ 0.55
YBX1-201ENST00000321358 ZNF786Q8N393 782 aa18.47■□□□□ 0.55
YBX1-201ENST00000321358 ZC3HAV1LQ96H79 300 aaKnown RBP18.47■□□□□ 0.55
YBX1-201ENST00000321358 WFIKKN1Q96NZ8 548 aa18.47■□□□□ 0.55
YBX1-201ENST00000321358 C1orf198Q9H425 327 aa18.47■□□□□ 0.55
YBX1-201ENST00000321358 ADGRL4Q9HBW9 690 aa18.47■□□□□ 0.55
YBX1-201ENST00000321358 SLC24A3Q9HC58 644 aa18.47■□□□□ 0.55
YBX1-201ENST00000321358 NPDC1Q9NQX5 325 aaPredicted RBP18.47■□□□□ 0.55
YBX1-201ENST00000321358 PLCXD1Q9NUJ7 323 aa18.47■□□□□ 0.55
YBX1-201ENST00000321358 BLOC1S6Q9UL45 172 aa18.47■□□□□ 0.55
YBX1-201ENST00000321358 LHFPL6Q9Y693 200 aa18.47■□□□□ 0.55
YBX1-201ENST00000321358 USP9XQ93008 2570 aaPredicted RBP18.46■□□□□ 0.55
YBX1-201ENST00000321358 IQCMA0A1B0GVH7 501 aa18.46■□□□□ 0.55
YBX1-201ENST00000321358 PRSS44E7EML9 344 aa18.46■□□□□ 0.55
YBX1-201ENST00000321358 OR2T7P0C7T2 308 aa18.46■□□□□ 0.55
YBX1-201ENST00000321358 CBR1P16152 277 aa18.46■□□□□ 0.55
YBX1-201ENST00000321358 RPS27P42677 84 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms